Siniperca chuatsi (mandarin fish): 122864175
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Entry
122864175 CDS
T08948
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
schu01006
]
122864175 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122864175 (trit1)
Enzymes [BR:
schu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
122864175 (trit1)
Prenyltransferases [BR:
schu01006
]
Compound prenylation
tRNA dimethylallyltransferase
122864175 (trit1)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122864175 (trit1)
Prokaryotic type
122864175 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_16
AAA_33
AAA_22
RNA_helicase
AAA_28
Motif
Other DBs
NCBI-GeneID:
122864175
NCBI-ProteinID:
XP_044027276
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All DBs
Position
LG17:20271188..20305653
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AA seq
486 aa
AA seq
DB search
MAASARSVQCALRRATIPSLVVILGATGTGKSKLAIEIGKRLQGEVISADSMQVYQGLDI
ITNKVTAEECAQCRHHMISFVDPLVSSYTVVDFRNKALTLIDDMHSRNKLPVIVGGTNYY
IESLLWRVLLDTGQENEESGDGGGGAPNRKLELEKLGGAELHKRLAEVDPKMAAMLHPND
KRKIARSLQIHEETGVPHSRWLEEQRGQEGGNGLGGPLRYPDPCIFWLHADMDALDKRLD
ARVDEMLSAGVIEELRDFHVCYNQQKVQDESQDYQHGIFQSIGFKEFHDYLIAPESSTQQ
EKDTLRDKGIEALKIATRRYARKQNKWVRNRFLKRPGDNVPVVYGLDVTDVSRWEETVLN
PALQILDSLSKGEKPAIAPIRVQGAEQRNKRSHHSCDLCDKVIIGDLEWTAHLKSKKHHY
HVRKKRKSDPACDQSEVTTAPPASAAEIAESLSKDSCATVAPGCSETSQESSQDTRTTHK
EVPVTS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgctcgcagcgtgcagtgtgccctgcggagagcgacgatcccgtcgttg
gtggtgattttgggagctaccggcaccggcaagtccaagctggcgatcgagatcggaaaa
cggcttcagggagaagtaatcagcgccgactccatgcaggtgtaccagggcctcgacatt
atcaccaataaggtgacagctgaggagtgcgcccagtgcagacatcacatgatcagcttt
gtggacccgttagttagcagctacacggtggtggacttcaggaacaaagccctgactcta
atagatgacatgcacagcagaaacaaactgccggtcattgtaggaggaacaaactattac
attgagtctctgctgtggagagtcctgctggatacagggcaggagaacgaggagtcaggg
gacggaggaggtggcgctccaaacaggaagttggagttggagaaactgggaggagctgag
ttacataaacgactggcggaggtggaccccaaaatggctgccatgttgcaccccaatgac
aaacgcaagatagccaggagtcttcaaatccatgaggagacaggtgtcccccatagccgc
tggcttgaggagcagaggggtcaggagggaggcaatggactgggggggccgctgagatac
ccagacccctgcatcttctggctgcacgctgacatggacgctctagacaagcggttggat
gctcgtgtagatgagatgttgtctgctggagtgatagaggagctcagagacttccatgtc
tgctacaatcagcagaaagtccaggatgagagtcaggactatcaacatgggattttccag
tcgatcggttttaaggagtttcatgattacctgatcgctcctgaaagcagcacccagcag
gagaaagacacactacgagacaaaggtatagaagctttgaagattgctacaaggcgttac
gcccgcaaacagaataaatgggtccgtaaccgcttccttaaacgaccaggggacaacgtg
ccagtggtgtatggcctggatgtgacggacgtgtcgaggtgggaggagacggtgctgaac
cctgcactgcagatactggacagtctcagcaagggtgagaagcctgctattgcaccaatc
agggtacagggggcggagcagagaaacaaacgaagccaccattcatgtgatctgtgtgac
aaagtgattatcggtgacctggagtggacagctcacctgaagtccaaaaagcatcactat
catgtgaggaagaagaggaagtctgacccagcctgtgaccaatccgaagttaccactgca
cctcctgcctctgctgcagagattgcagagagcctctcaaaggactcttgtgctactgtt
gccccgggctgcagtgaaacctctcaggagtcttcccaagacaccaggacaacacataag
gaagtacctgtgacttcttaa
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