Siniperca chuatsi (mandarin fish): 122864199
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Entry
122864199 CDS
T08948
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122864199 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
122864199 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122864199 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122864199 (gtf2h4)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122864199 (gtf2h4)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122864199 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122864199
NCBI-ProteinID:
XP_044027342
LinkDB
All DBs
Position
LG17:complement(27392090..27414664)
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AA seq
535 aa
AA seq
DB search
MQHRGCNCRKTSKKKKKKGEKKTWPLSERELSNDNNAVILYYKIILQPGIRRYFISIFTI
MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYSLYRELPSLAKNYVMRMLFLDQ
PLPQAAVALWVKKDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLG
GGRAWADEGSTLGPDRHARDIESLDRYAIERWEVILHFMVGSPCAAVSQDLAQLLVQAGL
MKSEAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTL
GRDYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSSNL
ASTPGAGDAGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAI
ANGITAQQSFFFFTLQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFTEGV
LYNQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSHT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcgtggatgcaactgccgtaaaacctcgaagaagaagaagaagaagggggaa
aaaaaaacatggccgcttagcgaaagagaactgtcgaatgacaacaatgcagttattttg
tactataaaataattttacagccaggaattcgtcgatattttatatccatcttcacgata
atgaagctgcgtgtccagcttcagtgtaagaatttgcatgaatacctgagagagctgagt
cctgagattttggacagactttacaaccatccagcaacatgtctggccgtctacagcctc
tacagggagctcccctctctggccaagaattatgtgatgcgtatgctgttcctggatcag
cctctcccccaggcagcagtggcattgtgggtgaaaaaagacagtcagaaggatcatgat
gaatgtgtctcagtgttggcaggactccgcctttggcacagtcagcagctgcagggtggt
ctgcagggatacattttaaatccagtgttcaaagacaacctgaggatagctctgctcggc
gggggcagagcatgggcagatgagggcagcactctgggtcctgaccgccacgcacgggac
attgagagtcttgaccgctacgctatagagcgctgggaggtcatcctgcatttcatggtg
ggttcaccctgtgctgccgtcagtcaggacctggctcagctgctggttcaagcaggcctc
atgaaaagtgaggcaggagaggcgccctacatcacctcagctggtttccagttcctccta
ctggacacagcctctcagctgtggtactttactctgcagtacctcaaaactgctcagtcc
agagggatggacctggtggagatcttgtcattcttattccaactcagtttttctactctt
ggcagagattactcagtggagggcatgagcgagtcattactcaccttcctgcagcacctg
cgggagtttggactggtcttccagaggaagaggaagtcgaggcggtactaccccaccaga
ctggccattactctggctgcaggagtcactaccagctcctcgtcctcgtcctctaacttg
gcttccactcctggtgctggagatgcaggcttcattgtggtagaaaccaattatcgtatc
tacgcctacacaaactcagaacttcagattgctctggtggctctcttcagtgaaatgctt
tatcgcttccccaatgtagtggtggctcaggttacaagggagtcagtgcaacaggccatc
gccaacggcatcacagcacaacagtctttttttttttttacccttcagattatccacttt
ctaaggaccagagctcaccctgtcatgctcaaacagaccccagtcctgcctccaaccata
acagatcagatcagactgtgggagctagagagagatcggctgcagttcacagagggagtg
ctctataaccagttcctctcccaggctgactttgaggtgctgcgagacagagctcagggt
ctgggctgtctggtgtggcaggatgtggctcacagggtgatggtggtgacaccgcaggga
cacagtgaggtcaagaggttctggaaacgacagaagtctcacacgtaa
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