Siniperca chuatsi (mandarin fish): 122864229
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Entry
122864229 CDS
T08948
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122864229 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122864229 (ctdp1)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122864229 (ctdp1)
Protein phosphatases and associated proteins [BR:
schu01009
]
HAD phosphatases
Fcp/Scp phosphatases
122864229 (ctdp1)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122864229 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
Biotin_lipoyl
PTCB-BRCT
RTT107_BRCT_5
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
122864229
NCBI-ProteinID:
XP_044027418
LinkDB
All DBs
Position
LG17:complement(22118836..22199148)
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AA seq
1006 aa
AA seq
DB search
MEDPLADSGGGGGGGVAAEGPAVQVADICWPTGALPLRLLEWKVKPGSLVNVDSVLALCA
PIPQEKGAEAARLPEKKVKSDRAGVVKELCCQLGQVISPGGVIVRIEECSHPIVMKGLCA
ECGQDLTQLQSMNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLYRNKKLVL
MVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVF
TFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRE
DVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMARKAGGPSSRPAESTEPAPTLGTDE
QNNGPRKRAKDNNISGKEESTTSQSSQGVSTNERTHPTGVVGDESGQGKGSENEAQSGAG
SRETHVGDRTNIKEDDSNRTLVTREAQDSANSSAPSHESNNLDFDLSSDSDNESITEKPP
SSESDSEGKSGQAKKSGQDGVTQEPGDEDGAREGDSKGRSQGETSSDTAEPSAVLPPDPE
LGNGCSDKREPETESQNSEQSGVTMGEELLDQNMEDEEEEEEEEEEADNDQDDHLIYLEE
VLERIHAEYYARYEAYLRKEASETPDIRKIVPELKSKTLEGTTIVFSGLYPTNYPMERTR
EHYHAKALGAKIGKNLVLSSEDPSRTTHLIAARAGTEKVRQAQGCNHLYVVNPDWLWSCL
ERWERVEEQLYPLKEDYSKTPRSNSPAAFPDNLGSMQKPILHPAAIHYRPSPPAPEVRTY
DPVTGKLIRRGPQVSRPPPYLQASGSLLLSDHREQSCLRGTSKSQQDGVAGSSQDNEQPG
PSRRKRQPSMSESMPLYTLCKEDLDSMDKEVDDILGEESDNESEGRGKEKPGNEEEVEDD
EEEEEEEQQQQLGAGQIAGGGPRPQALSVEERIHTPSSEASLPSSVPRGHKRKHDEAKEE
EGDENKEVAEESADESSKDSNGEEGGSSSEADEMAAALEAELNDFM
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcttgcagattctggcggtggtggcggcggcggtgtagcagcggagggc
cccgcggtgcaggtggcagatatctgctggccgaccggggctctccctttacggcttcta
gagtggaaagtcaaacccgggtctcttgttaatgtggactccgtgcttgcactgtgtgct
cccatacctcaggagaagggggcagaggctgccaggctgccagagaagaaggtgaaatca
gatcgtgctggagtagtcaaggagctatgctgtcaacttggacaagtcatatctcccggg
ggtgtcatcgtcagaatagaagaatgcagccatccgatagtaatgaagggtttatgcgct
gaatgtggccaggacctgactcagctgcaaagcatgaatgggaaccagcaaactcccatc
tccacagcaaccgtctccatggtgcacagtgtccccgagctgatggtcagctcagagcaa
gcagaacagctgggcagagaagaccagcagagactctaccggaacaaaaagctggtcctg
atggtggatctggaccagacgctgatccacaccactgaacagcactgccagcgtatgtcc
aataagggaattttccacttccagctcgggcgaggagagcctatgctccacacacgacta
cgcccacactgcaaggaattcctggagaaaattgccaaactctatgagttacatgtcttc
acattcgggagccgcctttacgcacacaccattgccggctttctggatcccgaaaagaag
cttttctctcatcggatcctttctagagatgaatgcatcgaccctttctccaagacaggg
aatcttaggaatcttttcccttgtggtgactcgatggtctgcattatcgatgaccgagag
gatgtgtggaagtttgcacctaacctcatcactgtgaagaaatacatctacttccagggc
acaggggacatcaacgctccccctggatcacgggaagctcagatggcaaggaaagcagga
ggcccgtcaagtcgacccgcagagagcacagaaccagcaccaacacttggtactgatgag
caaaataatggtcccagaaaaagggcaaaagacaacaacatttctggaaaggaagagtcc
acaacatctcagtcttctcagggagtatcaacaaatgaacggacacatcccacaggggtt
gtgggggatgaatcgggacaaggtaaagggtcggagaatgaggcgcagtccggggcgggg
tcaagggaaactcatgtgggtgacaggacaaatattaaggaagatgatagcaacaggaca
ctggtgacacgagaggcacaggacagtgcaaactcatcagcaccgagccatgagtctaat
aacttggactttgacctttccagtgacagtgacaatgagtccattacagaaaagcctccc
tcatcagaaagcgatagtgaaggcaagtctggccaggcaaagaaatctgggcaggacggg
gttacgcaagagcctggtgatgaagatggggcaagggaaggggacagtaaaggtcggagt
caaggagaaaccagctctgacacagcagaaccttcagcagttcttcccccagaccccgag
ctgggaaatggctgctcagataagagagagccagaaacagagtcccagaatagtgaacaa
tctggggtcaccatgggggaggagctgctggaccagaatatggaggatgaggaggaggag
gaggaggaggaagaagaagctgataacgaccaggatgatcacctgatctacttggaggaa
gtgctagaaaggatccacgcagagtattacgcacgttatgaggcctacctgagaaaagag
gcctctgaaacgccggacatccgcaaaattgtcccagagctgaaaagcaagacactggag
ggcacgacgatagttttcagtggactgtacccaaccaactaccccatggagaggacccgt
gagcactaccatgccaaagcactgggggccaaaattggcaagaatctggttcttagctcc
gaagatccgagtcggacaacgcatctcatcgcagcaagagctggcaccgagaaggtccgt
caggcacaaggctgcaaccacctctatgttgtcaaccccgactggctgtggagctgtctg
gagcgctgggagagggtggaggagcagctgtacccactaaaggaggactattccaagacg
ccaaggagcaacagtccagcagcattccctgacaatctgggctccatgcagaagcctatt
ttacacccagctgccatccactacagaccttcacctccagcccctgaggttcggacctac
gaccccgtcacagggaagctgatccgcaggggccctcaggtgtcacggccaccaccctac
cttcaggcgtcagggtctttattgctctctgatcacagagagcagtcttgtctcagggga
acttcaaagagtcagcaagatggtgtggcagggtccagccaagacaacgagcagccagga
ccgtctcgtcggaaacggcagccgagcatgtcagaaagtatgcctctatacacactttgc
aaggaggatctagacagcatggacaaagaggtggacgatatcttaggtgaggagagcgac
aacgaaagtgagggcagagggaaggagaagccaggcaatgaggaggaggtggaggatgat
gaagaggaggaggaggaggagcagcagcagcagctgggagctggacagatagcaggagga
gggcccaggcctcaggcgctgagtgtggaggagaggatccacacaccatccagtgaggcc
agtctgcccagtagtgtaccaaggggccacaaacgtaagcatgatgaagccaaggaggag
gaaggcgacgagaataaggaggtggcagaggaatccgctgacgagtcttctaaagactcc
aacggggaagaaggcggcagcagctcggaggcagacgagatggcggctgccttggaggca
gagctcaatgactttatgtga
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