Siniperca chuatsi (mandarin fish): 122864343
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Entry
122864343 CDS
T08948
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122864343 (rnf115b)
04121 Ubiquitin system [BR:
schu04121
]
122864343 (rnf115b)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122864343 (rnf115b)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122864343 (rnf115b)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122864343 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
U-box_ZFPL1
DUF7560
DUF8608
Motif
Other DBs
NCBI-GeneID:
122864343
NCBI-ProteinID:
XP_044027566
LinkDB
All DBs
Position
LG17:10833272..10840104
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AA seq
295 aa
AA seq
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MAEAAETPQHRFFCHCCKCETNPKLPDFVCPRCDSGFIEEVTEDSSLLQDSTSVTSEDSN
SLFSDLWQLLFMERSALLSHPPSSESDPDDSEQVSAGQRRPSSVSPGAAEGREPVSPSQP
QQERSSRPEQRPAVEGIVQQFLSGLFANNGNPGAAPAALSSMLQLYANPGDYAWGQGGLD
AVITELLGQLENTGPPPAEKEMISSLPTVCISQEQTDCRLECPVCREEYSLGESVRKLPC
LHYFHSECIVPWLELHDTCPVCRKSLDGVDSSLPPTSEPPEARSIRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcagagacaccacaacaccggtttttctgtcactgctgtaaatgtgaa
actaaccccaaactcccggatttcgtttgccccagatgtgactctggcttcattgaggag
gtgacagaagactccagtctcctgcaggacagcacatcagtgaccagcgaggattcaaac
tcattgttctcagacttatggcagctgctgtttatggagcgctctgctctgctgtcgcat
ccgccctcctcagagtccgacccagatgacagcgagcaggtatctgcaggtcagaggcgt
ccttcttcagtgtcgccaggcgccgctgagggcagagaaccagtgtctccctcccagcct
caacaagagaggtcgtccaggcctgaacaaaggcctgcagtggaagggatcgtgcagcag
ttcttgtccggcctgtttgccaacaatggaaaccctggtgctgcaccagctgcactatcc
agtatgctacagttgtacgcaaaccctggagattatgcgtggggtcagggaggtctggac
gctgttatcacagagttgttagggcagttggagaacacaggtccaccccctgcagaaaag
gagatgatctcatccctgccaacagtttgcatctctcaagaacagacagactgcagactg
gagtgtccagtttgcagggaggagtattcattaggggaatctgtcaggaagctgccctgc
ctccattacttccacagtgaatgtatagtgccttggctggagctgcatgatacctgccca
gtgtgccgaaaaagccttgacggtgtcgacagcagcctcccgcccacgtcagaaccccca
gaagcccgctccatcaggacagagcaacaggagaggcaggcaatctga
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