Siniperca chuatsi (mandarin fish): 122864390
Help
Entry
122864390 CDS
T08948
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122864390 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122864390 (grin2da)
04082 Neuroactive ligand signaling
122864390 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122864390 (grin2da)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122864390 (grin2da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF8168_N
Gp7_5th
Motif
Other DBs
NCBI-GeneID:
122864390
NCBI-ProteinID:
XP_044027672
LinkDB
All DBs
Position
LG17:complement(4258254..4533732)
Genome browser
AA seq
1987 aa
AA seq
DB search
MVVPRPALSLLLAVLACTGPARPSPPLLLRPRERERDSGGVNIAVVHSGSSLFPETAVVG
GAGVSEPGPGLGNGPGGGGGGGGGKGVTDTALLEGVAAMASFSSSSSSTLSLAALVGETV
MTPSGQANVIYLAVNESSPGSLLLQLCELLATTPLQGLVFEEERPPPPNRAPLAPMLEFV
SAQTGVPVVAVGGGASLGREPQESGSIYLQFTCSTSLQLEVIFEVLEEYDWTSFSVVTTR
HHGYEDFLAMVEGMTDGSFIGWEKKSVVILNVTDDPGGARTKRLLKDNEAQVRLLYCSLE
EAELVFRAAWAAGQDGPSHMWFAVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGV
SVLTHGAMALRRDQGSTSRSQYAGNCQSDGNQTHRIPDRIRYFSNISIGGRDYSFNSDGY
LSKPLLDVISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFLKPLDDSQHLRVVTLEERP
FVIVEPADPGTSSCIRDSVPCRMPINTSLVVDGTGPMKHCCKGFCIDVLKRLAKIVGFTY
DLYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEERSEVVEFSVPFVETGISV
MVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKSG
GSKFTIGKSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQ
EEYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNNQKGVEE
AIENLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPL
DLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVF
AWEHLVYWKLRHCVKRSGGMDFLLALSRGMYSCCQFEDETAPGGSKSSLPQYHTMTTMPT
AAQQHLVTATINNTTAIAMVQQHQQQKHHQQQQQGQTYTTMLPGSPPTTGHSAMALGPSN
SPLMEGPMPCSTFLPRHDRRLAVVDRWNRPKPEKVMSGGSGGGVGVGGIAGGISELQAQQ
QYQQNLGQHWNLQGGVAGGGGDTGLDEYKRYYGPIDPEGLGANSDQQVGGPQQTPKANPR
GPKASGMPRQPPKGPQQGPGHLISKPPPPIPSSPRRPPFWRRGSLAQARRKGSGGPLYEN
ILPLGRRGGGRYGASDGGGRRGRRPPPPPPLPVPLSSPTHTPTTPSSPCRFYSSCSSASS
SSTSSTSSSSSSSSSVSLSRSNSPSSCSSDSSYNSSLSFRYRAGDRDFMVDDDYDSDLLT
EESSLLLGSRRKSRSRRMSSRSLPCSPPPPPIPPRKPRPQRDYGRERTGSQLAQLQEWWA
SWGDRERGRGGTTSRGDGGVGREEKRHHKEREHERKRRKKGRKKKKREERERERERKRRK
TKKKRKKEDKIRKRERKRSEQEGGDAEKREELKSGTPDYPSYPPLRRESFRKKSESSIRS
YGWNIPGEDERKEREEKERDDGEDSRGKERHHKRRNSKHYQSSSSKPSSSVKFWGGGNPS
SDTIPSAFLPLLPVSSKRRKSKSSDRDAVGMEGERRPLLGRNGRGEMHTKEGLSFHEWES
EVEREEEDSELERRKAERGKRRRGARTMSDEERERDKVVGIYSDDDGSSGEFGKFERYWE
DHEGRAVGGIGGGGWFFSTYPSRDKIGSINSRDDLFLERGERWGTAESGWGSSGGGGGGG
GGDGRERGWGSGSHWPPPPLTPPPPRRYWSVDKLHIQDEKKSKRKSKDKGRDHAACSSCH
SPRHHPHSHSSKWARITSRSQEELYHHCQSFGGPLKPKHDSSSSSKPDRSQNPSKSGSQS
NLSIQQRTQRTDRDRDRGRQPSPPPTLIPNLAPPLPALPAPPSSSHPIHIPPPTSSSSVS
SPSVVSSTPGAPQPSSMASASAKLQYQRLRSVPQPQRFPQSPHLPLKAKSLCSRRGSAHF
SSVESEV
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcccaaggcccgccctctcactgctattggctgtcctggcctgcacggggcca
gcgcgcccctcgccccccctgctgctccggccccgggagagagagagggactcgggtggc
gtcaacatcgccgtggtccactcgggctcctccctgttcccggagacggcggtggtggga
ggtgcgggggtcagcgagccggggccggggctgggaaacggtccaggaggaggaggagga
ggaggaggaggaaagggagtaacggatacagctctgttggaaggagtggctgcgatggcc
tcattttcctcctcctcctcgtcaaccctgtcgctggctgcgctcgtgggggaaacggtg
atgacgccatcgggtcaggccaacgtcatctacctggctgtgaatgagagcagcccaggc
agcctgctgctgcagctgtgtgagctgctggccaccacaccactgcagggtttggtgttt
gaggaggaaagaccgccgccgccgaatcgcgcccctctggcccccatgctggagtttgtc
tccgcccagacgggggttcccgtggttgccgtagggggaggggccagcctgggacgagag
ccacaggaaagcggctccatctacctccaattcacctgctccacctcactccagctcgag
gtcatcttcgaggtgcttgaagagtacgactggacctccttctctgtggtgaccacccgt
caccacggctacgaggacttcctggccatggtggagggtatgacggacggttcattcatc
ggctgggaaaagaagagtgtggtgattcttaacgtgacagatgaccccggcggagcccga
accaaacggctgctcaaagacaacgaagcccaggtccgtctgctgtactgctccctggaa
gaggctgagctggttttccgggcagcctgggcagcgggtcaggacgggcccagtcacatg
tggttcgccgtgggacctgccctgtccggtttgggcctggaggggctgcccaaggccttg
ttcgcagtccggccgcagggctggagggatgagccacgcaggcgcattgccaaaggcgtt
tcagtgctcacccacggggcaatggctctgcggagggaccaggggtccaccagccggtcg
cagtacgccggcaactgccagagcgacggcaaccagacccaccgaattccagacagaatc
aggtacttcagcaacatatccattggtggacgggactattctttcaacagtgatggctac
ctgtccaaaccgctgcttgatgtcatctcctacaccaatgggagaggctgggaggaggtt
ggctggtgggagaacggccacttgcgtctgcgttaccatccctggtctcgttacggctcc
ttcctgaagcctctggatgactcccagcacctccgagtggtcactttggaggagaggccc
tttgtcatcgtggaaccggctgacccaggcaccagctcctgcatccgagactccgtaccc
tgtcgaatgcccatcaacaccagtttggtggtggatggcaccgggcccatgaagcactgc
tgcaaagggttctgcatcgacgtcctcaagcgactggcaaaaattgtgggtttcacctat
gacctttacctggtgaccaatgggaggcatgggaagaacattgatggggagtggaacggc
atggtcggagaggtggtgtccaacagggctgacatggccatcggttctctcaccattaac
gaagagaggtcagaggtcgtagagttctccgttccattcgtggagactggcatcagtgtc
atggtttctcgcagtaatggcaccgtatcgccttctgctttccttgagccctacagcccg
gcagtgtgggtgatgatgtttgtgatgtgcctgtcggtggtggctgtcaccgtcttcatc
tttgagttcttcagccccgtgggatacaaccgcagcctgcagagcgccaagaagtcagga
ggatctaagttcaccatagggaagtccgtctggctgttgtgggcgctggtcttcaacaac
tctgtgcctgtggagaatcccagaggaaccaccagcaagatcatggtgctggtgtgggcc
ttcttcgctgtcatcttcctggcctcctacactgccaacctggctgccttcatgatccag
gaggagtacattgacacggtgtcagggctgtccgataagaagttccagcacccgacagag
cagtacccaccgctgcgtttcggcacagtgccaaacggcagcacagaggagaacatccgc
tctaactatcccaacatgcaccagtacatgatccgcaacaaccagaagggtgtggaggag
gccattgaaaacctcaagactgggaaactggatgccttcatttatgacgctgcggtgctg
aactatatggccagaaaggacgagggctgcaaggtgatgaccatcggctctggtaaggtg
tttgccactacgggctatggcatcgccctgcacaagaactcccgctggaaacggccacta
gacctggctctgctgcagctggttggagatgatgagattgatatgttggagcgtctctgg
ctgtcgggtatctgccacaatgataagatcgaggtaatgagcagtaaactggacatagac
aacatggcaggggtcttctacatgctgctggtggccatgggcctcagcctcctggtattt
gcctgggagcatctggtgtactggaaactacggcactgtgtaaagcgatctggcgggatg
gacttcctcctggctctcagcagggggatgtacagttgctgccagtttgaggatgagaca
gcaccaggaggcagcaaaagctcgttgccccagtaccacaccatgaccaccatgcctaca
gcagctcaacaacaccttgttacagccacaataaataacacgactgccattgccatggta
cagcagcatcagcagcagaagcaccaccaacaacaacaacaggggcagacctataccacc
atgctacccggatcgccaccaactacaggacactcagcaatggctctgggaccctcaaac
agccccttaatggaaggacccatgccctgctccaccttcctgccacggcatgaccgcaga
cttgctgtggtcgatcgctggaacaggccaaagccagagaaagtcatgagcggaggcagt
ggtggaggagtgggagttggggggatagcaggagggatcagtgaactccaggcccagcag
cagtatcagcagaaccttggacagcactggaacctgcaaggaggagttgcagggggagga
ggtgacacggggctagatgaatataagcgctactatggtcctatagatccagaggggcta
ggagctaattcggaccaacaggtaggtgggccccagcagactcccaaagctaatcctcga
ggccccaaagcctctgggatgccacgtcagcctcctaaaggcccccaacaaggcccaggg
cacttaatctccaagccacctccaccaattccatcttccccacgaaggcctcctttctgg
cgacgaggaagcctagctcaggcaaggagaaaaggctcaggaggtcccctgtatgagaat
atactccctctggggaggcgaggaggtggtaggtatggagcaagtgatggaggtggaagg
agagggcgacgtcctcctccacctcctcctctgcctgtccccctttcctccccaacacac
acccctaccactccctcctccccatgccgtttctactcctcttgctccagtgcctcgtcc
tcctccacttcctctacatcatcttcatcctcttcttcatcctctgtctcactctctagg
tcaaattccccctcctcttgctccagtgacagctcctacaactcctcactgagtttcagg
tatcgagcaggtgaccgggactttatggtggatgacgattatgactcagatctgcttaca
gaggagtccagtctcctcctggggtcacggaggaagagtcgttcacgccgcatgtcatca
cgctcactgccgtgcagccctccacctccaccaatcccgccccggaagccacgccctcag
agagattatggcagagagagaacaggcagtcagctggcccaattacaagagtggtgggca
tcgtggggtgacagagagcgagggaggggaggaacaacaagccggggagatggaggagtg
ggtagagaggagaagaggcaccacaaagagagggagcatgagagaaagaggaggaagaag
ggcagaaagaagaagaagagggaggagagggaaagagaaagggagcgaaagcggcgcaaa
acaaagaagaagaggaagaaagaggataagataaggaagagagagcggaagaggtccgaa
caggagggaggagatgctgaaaaaagagaggaactcaaatcagggacaccagactaccca
tcatacccacccctaagacgggagtcttttcggaagaaaagtgaaagctcaatcaggagc
tatggatggaacatcccaggtgaagatgagaggaaggaaagagaagagaaagagagggat
gatggggaagacagcagagggaaagaaagacaccacaagcgaaggaacagcaagcactat
caaagctctagcagtaagccttcttcatctgttaagttttggggagggggcaacccatcc
tctgacaccattccatctgcctttctgcccttgttgcctgtctcctctaaaaggaggaag
agtaaaagttcagacagggatgctgtaggaatggaaggagagaggaggccattgctggga
cggaacggaagaggtgagatgcacaccaaggaggggttgtccttccacgagtgggagtcc
gaagtagagcgtgaggaagaagattctgagctagagaggaggaaagcagagcgtggaaag
aggcgtagaggagcaaggacaatgtccgatgaggagcgggaacgtgataaggtagtcggg
atatattctgatgatgatggttcttcaggagagtttggtaagtttgagaggtactgggag
gatcatgaaggcagggcagtaggagggattggagggggaggttggtttttcagcacctac
ccctccagggataaaatcggcagcatcaacagtagagatgacctgttcctggagcgagga
gagaggtgggggacggcagaaagtggatgggggtctagtggaggtggcggtggtggagga
ggaggagatggaagagagagagggtggggatcgggatcacactggcccccgccccctctc
acgccaccacctcctcgacgatactggtcagtggacaaactccacatacaggatgagaag
aagagtaaacgcaagtcaaaggacaagggaagggaccacgcagcttgttcctcctgtcat
tccccccgacaccatccgcactcccattcctccaaatgggcccgcataacctcacgaagc
caggaagagctgtaccaccactgtcagagttttggaggtcccctgaagcccaaacatgac
tcatcatcctcctccaaacctgatcgctcacaaaatccatccaaatctggcagccagtca
aaccttagtatccaacagcggacacagagaacagatagggatcgagatcgaggacggcaa
ccatccccacctccgacactcatacctaacttggcacccccactccctgcccttccagct
cctccgtcctcatctcaccctatccacattcctccccctacctcttcctcttctgtatcc
tctccctctgtggtctcatctaccccaggagcaccccagccctcctccatggcttcggca
agtgctaaactacagtaccagagattgcgctctgtacctcagccccagaggtttccacag
tctcctcacttacccctcaaagccaagagcctttgctcacgaaggggctcagcccatttc
tccagcgtggagagtgaggtctga
DBGET
integrated database retrieval system
