Siniperca chuatsi (mandarin fish): 122864444
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Entry
122864444 CDS
T08948
Symbol
cica
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122864444 (cica)
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122864444 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
122864444
NCBI-ProteinID:
XP_044027820
LinkDB
All DBs
Position
LG17:6014069..6051345
Genome browser
AA seq
2533 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGVGDAPEGGEKRDSDENRDRSRSPQNRTPSSSFSSNS
HSESSQADTIRARDTSEGEGLHREGLSDTTVSLVMDSGKISTSSDDRSGRSAVSGSSHSD
SGGSSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSSTTGNHSNPSSSTPPP
LLLSGGVIDHETTGSGSDICVSHPDGNNQSRSLMDNFHSRTTGRDGPQDGSPGPPTLSFG
GERERPGRGEGVRDAERMSPTPLPRCSSTDTASEHSADLEVVGDTHTLTQMSTHAPPTLP
DALSDALAKGLKNQRVLARQLRRSDEEGGSERDEGRSSDLVFRAGVVRKVSGEFGSLEVQ
LNGEKTLCRYPYQHDSPPGVVDIILDAPPPGVHPIPIGTRVCVPFGNEEGSEGQWQWYRE
GVVTQVDTHPAVANRYRVLLSEERSHSVDEEEDGRGAANATQAVWVSRQTLRLLVPPWDL
DLPSVGGRDGEEGVRDKEREREDREEMDVEQEVCRLSRGMTPGVGSVLGRGMPYPGMVPI
SSTSGHNITSPVTPVSVLSLAPGREWEIEKDLERERDLQRKQDRERERERERENSAMQQQ
QQQQQHHPYMPLTPEEDMEVSHFNMVPMGAIIPGVKPIAVPQHRHIVSKPPPGYLNPHLS
VVRGIGIPPAHLALNPHPAPSPVLLGLDPATTAAAAAGAVITTPQLPPLPPISSSTASSS
RVEKASGGGSSSGGAGGGSGSGSGSTSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNG
KQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGSRERGGASSTGTLTPSDLRLSG
GRASSEFDWDETSRESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLGGS
RSGTPSFSPISNQSPFSPTPSPSPSPLFGFRPANFSPITAPASLTPRRPRQLSGTKMGTP
GAERERHLSGIVPTFQTNLTFTVPMSPSKRKLDNHPPPPLPAVQDYQTKPEQQQLVGIGG
GVVGDPTLGHSPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPP
SPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRRERSRSREHSQPQHTAPPGLQ
VPVPINGATTNGAVLLRNPTSTLVLVTSSSSLTPATVGHAALSIPSTPGSMPTSSGSILS
SSSSGGRERERKPEGHQDASEGALPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGRP
GTVWTNVEPRSVPVFPWHSLVPFLEPSQSGVAAQPADGQQLVNQSKEPRCGVALVSDGPS
GPPDLDTGSPSCPPPTNDNPPRDRGGADSETESDTDDPFSPGVTNDPAPSTGPMKRRTQS
LSALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGP
NEKQQYHDLAFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGTTKESRERSMSESIDPHSES
QVLEGKGGSSGWPGGSERRGGLFMGQHPRPRAFSQSAVHTLEQREREGDLEKEDGASLFR
HRPLPQSLYQGGVSEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDE
PDGQHGFQPVARSSLPSSSPSMPHSDSTSAKGNGRGGGGGEEGSERKRKRGTDEGEEGSE
GGSKRDETAASGGEGGGGGGQGVSSLSIAGSTSSTQAPLALAQQGLTQVLGAARMAPTMV
TNVVRPIASTPIPIASKPVEGAVTLSSLPQDKKATLLIGGGGPQQLPITAGGGYLSSSSS
PGPVSVTPLGGSSLVTSLVLGGSFPAAQPVQLLTPPQPHAQTPLPVLQPQLHPTAATSSL
TPPTGPKPLAQVHYILPTESPSSPQLTHQQILSLPTNAALANGVHSGAGIRVASVSPGTR
VQTQSPVLQSKMLVPMATVRTGSTPPHPSISLVAPPLPVQNGPATGNKIIQIAPMPVVQT
NVHPSGAAAVHPGSPFPVSMATVMAPGAAPPQTVLLTSPPTRITYVQSSPGVTTATPQQA
TPAPCPAYLPSSLATLGFTAIAPAGQTLVQPLVGQPPVLAPAPPLSCQSQTPPGQASGTT
GRQVLTAIYPAPTIALATGVVSVTTMPPTVAAPAQDIINPSSPLATGVQGSAVATPQANL
AEEVEPKVEVKRESQVDEDGGHGLSSCAVSSSFATCMSNATAVKKEEDISLHIKEENLRD
GHSRETRSEMDRERGMKENNEKKRGRETDRQDHSMGDSSKEAGPRSPPPPPSGLDPPPPP
PAEREPPSSSKKTKFRPPPLKKTPDSLDKVLSETYFEERFAELPEFNPEEVLPSPTLQSL
ATSPRAILGSYRRKRRNSTELELTAEDPSSPRRKTRRLSSCSSEPNTPKSAVKCEGDIFT
FDRPGTEGEDLLGDLDRVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDT
FPTKVCLQLKIREVRQKIMQTATPGTLELGGSAEANLAPPHSSSFNQSAREDGGAEQQGD
KGRSPEEPKSEGS
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaaaaagcagggccggcggtctcctccctccacccgggccaaagggggg
aagcgtcgcggagtgggggatgccccagaaggaggggagaagagagactcagatgagaac
agagacagaagcagatccccacaaaatcgaacaccctcctcttctttctcttctaattca
cactcggagtcctcccaggcagacacaatcagagcacgtgacacttcagagggggagggg
cttcacagagaagggctgtcagacacgacagtatcacttgtaatggattctgggaaaatt
tcgacatcctcggatgatagatcagggaggtcagctgtgagcggcagcagccacagtgac
agtggtggtagcagttgtagtaacagtagtacaccaagcgccaacaacagcccaaacccc
gcctcaagccggaaaacagccaccttcaaggcccgcgttcccaagaagaagtacacctct
gaacactgctcgtctactactggtaaccatagcaacccttcctccagcacgccccctcca
cttcttcttagtggtggggtcatcgaccatgagacaacgggttcaggaagtgacatctgt
gtctcacaccctgatggcaacaatcagagtcggagcctgatggacaatttccacagtagg
accactggcagggatgggcctcaggacggctccccaggaccccctaccctgtcgtttgga
ggggagagggaaaggcctggaagaggtgaaggggtgagagatgcagagcgaatgtcgccc
acccccctgccccgctgctcctcaacagacactgccagcgagcactcagctgacctagag
gtagtcggcgacacacacaccctcacacagatgtctacacacgcaccgcccactctccct
gatgcactgtctgacgccctggccaaagggctgaagaatcagcgtgtcctcgcccgccag
ctcaggagaagtgacgaggagggaggaagcgaaagggatgaagggaggagttcagacttg
gtgttccgggctggagtggttcgtaaggtcagcggtgaatttggaagcctggaggtgcaa
ctgaatggggagaagacgctgtgccgttatccgtatcaacatgatagtcccccaggggtg
gtggacattatcttagatgccccgcctcctggtgtccatccaatacctattggcacccgt
gtctgtgtaccatttggcaatgaggagggcagcgagggccagtggcagtggtaccgagaa
ggtgtggttacccaggtggacacacaccctgcagtggccaaccgctaccgtgtcctgctg
tctgaggaaagatctcactctgttgacgaggaagaggatggcagaggggcagctaatgct
acccaggcagtgtgggtctcccgacaaacactccggcttctggtgccaccttgggacctg
gatctgccgtctgtaggaggacgagatggagaagagggggtgagagacaaggaaagggag
cgggaggacagggaggagatggacgtggaacaggaggtgtgtcgtttgagccgggggatg
acacccggggtggggtcagtgttgggaagaggaatgccctacccaggtatggtccctatt
tcctccacgtcgggccacaacattacctccccagtaaccccagtgtcagtcctcagcctt
gctcctggccgagagtgggaaattgagaaagacttggagagggagagggacctccagaga
aaacaggatagagagagggaaagagagcgagaaagggagaacagtgcaatgcagcagcag
cagcaacagcagcaacaccacccgtatatgccactcacccccgaagaagacatggaggtg
tcccactttaacatggtcccaatgggggcgatcatacctggggtcaaaccaatagcagtt
ccccaacaccgccacattgtctctaagcccccacctggctacctcaatccccacctgtct
gtggtgcggggcatcgggatcccccctgcgcacctggccttgaacccccaccccgctcct
tcacctgtcctgttaggccttgacccagcaaccacagcagctgcagcagctggtgctgtc
attaccaccccccagctccctcctctccctccaatctcctcttccacagcgtcctcctcc
agagtagagaaggcctcaggaggagggtcttccagtggaggagcaggtggtggcagtgga
tccggatcaggttcgacctcctcctcacgttcccgcacaccactgacagctgcccaacaa
aagtacaagaagggagatgtggtgtgcacgccaacaggcatccgtaagaagttcaatggg
aagcagtggaggagactgtgctccagggagggctgctctaaagagtcccagcgcagagga
tactgctcaagacacctctcaatgaggaccaaggagatggaagccagtggaggcagccgg
gaacggggtggagccagcagcacaggaaccctgacgccgtctgatctccgactgagcggt
gggagagccagctctgagtttgactgggatgagacgtcacgggaaagcagcgaggccagc
agccgtggaggagactcccgcccccgcttggtccttccctctctgctccctcaggacctc
tctcgtttcgactttgatgagtgtgaggcagcgaccatgctggtctccctggggggctcc
cgctcaggcacaccatcattctcccctatttccaaccagtcgcccttctcccctacccca
tcaccctcaccctctccgctctttggctttcgccctgctaatttcagccccattactgct
cctgcctcacttactccacgccgccctcggcagcttagcggcactaagatgggcacgcca
ggtgctgagcgagagcgccacctctcggggattgtgcccacttttcagaccaacctcact
ttcacagtccccatgagccccagcaagaggaagctcgacaaccatccgccccctccgctg
cctgcagtccaggactaccagaccaaacctgagcaacagcagctggtgggcataggggga
ggggtggtgggagacccaaccctgggccacagccctgccgccttcagagtcctctccccc
cagagtcagcccacaaccccctcctcactttccttcccccggccccgtagcgccaccagc
aggccaccatcctccgctgcctccacacctccacccatgctggtctctcccactcctccc
tccccgctgccccaggaaccctccccacgccgcattgtgcccctccgcgattccccagtc
attgtccgcaacccagatgtccccctggccaagttctctgatggcccgttaggaaggaga
gagagaagccggtccagagagcacagccagccccaacacacagctcccccaggcctgcag
gtccccgtccccatcaacggggccaccactaacggtgcagttctcctgcgcaaccctaca
tccacacttgtcctggtcacctccagctcgtccctgactccagccacagtgggccatgcc
gccctgtccatcccatccacccccgggtcgatgcccacttcatcaggctcaatcctgtcc
tcctctagttctggaggcagggagagggagaggaaacctgagggacaccaggatgcctct
gaaggggcgctaccacagccggtagcctgtcacccaacgccgactgccctgctgccactg
atactgccagctgagtcgcctcaccctgctccacgcaagcaaatcatcatgggacgccca
gggactgtttggaccaacgtggagcctcgatcggtgccagtgttcccttggcattcactt
gtccctttcctggagcccagccaatcaggagtggctgcccagcctgctgatggccaacag
cttgtcaatcagagcaaagagcctcgttgcggtgtggccctggtgagcgacgggccgtcc
ggtcctccagacctagacacgggatcaccgtcatgccctcccccgaccaatgacaatcct
cctagagacaggggcggggctgacagcgagacagagagtgatacagatgacccgttctcc
ccgggtgtgaccaacgatccggcgccctccactggccccatgaagagacgcacgcagtcc
ctcagcgccctgcccaaggatggagacaggaagagggagaaggaccatatccgccgtccc
atgaatgcattcatgatcttcagtaaacgccaccgggccctggtgcaccagcgacacccc
aaccaggacaaccggacagtcagcaagatcctgggggagtggtggtacgctctggggccc
aacgagaagcagcagtaccacgatctggccttccaggtgaaagaggcccacttcagagcc
cacccagactggaagtggtgcaacaaggaccgcaggaagtcgctgtcagagggccgtggg
acaacaaaggagtcacgggagaggagcatgtcagagagcatagatccccattcggagtcc
caggtgctggaggggaagggaggaagctcaggctggccagggggatcagagcgtcgaggg
gggctgtttatggggcagcacccccgtccccgagccttttcccagagtgccgtgcacacc
ctggagcagagggagagagagggagacctggagaaggaggatggggcgagtttgtttcgc
caccggcccctgcctcagtccctgtaccagggtggggtcagtgaggacgtgaccagtgac
gaagagcgcatggtcatctgtgaggaagagggggacgatgatgtcatggaggattcctgt
cctgaaggctccattgacctcaagtgtaaagagagagtgacggacagtgatgaggacgaa
ccagatggacagcatggcttccagccagtggctcgctcctctctcccctcttcctctccc
tccatgcctcactctgactccacctcagctaaagggaatggaagaggaggaggaggtggt
gaagaggggtctgagaggaagagaaagagaggtacagatgaaggagaggaggggagcgag
ggaggatccaagagagacgaaacagcagcaagtggaggagaaggaggtggaggaggtggg
cagggtgtctcctctttgtccatcgcaggctcaacatccagcacccaggctcccctcgct
ttggcccagcagggtttgacccaggtccttggcgccgcccgcatggctcccactatggtg
accaatgtggtacgacccatcgccagcacgcccatccccattgccagcaagccagtggaa
ggagccgtcaccctcagctccctgccccaggacaagaaagccactctcctgattggagga
ggcggacctcagcaactaccaatcaccgcagggggtgggtacctgtcctcatcctcctcc
cccggtccagtcagtgtaacccctttggggggcagcagcctggtcactagcctagttctg
ggagggtcctttcccgctgcccaaccagtacagctcctcacccccccgcagccacacgca
caaacccccctacctgtcctccagccgcagctccaccccactgccgccacctcctctctc
acacctcccaccggccccaagccgctagcacaggtccactacatcctgcctacagagagc
ccctcctcccctcaactcacccaccagcaaattctctccctgcccaccaatgccgctctg
gccaatggcgtgcactcgggggcaggaatcagagttgcatcagtcagccccgggaccaga
gtccaaacccagtcgcctgtcttgcagagcaagatgttggttcccatggcaacagtgaga
acagggtctactcctcctcatccttccatttccctggtcgcgccgcctcttcctgtgcag
aacggccccgcgacaggaaacaagatcatccagatcgctcccatgcctgtggtccagacc
aacgttcaccctagcggcgcagcagcagtgcatcctgggagcccctttcctgtttccatg
gcaacggtgatggctcccggtgccgcgcccccacagaccgttcttctgacctctccgccc
accaggatcacctatgtccagtctagcccaggagttaccacagcaacgccccaacaggcc
acacccgctccgtgtcctgcatatctcccatcatctctggcaaccctgggcttcaccgcc
attgccccggccgggcaaaccctggttcagccgctcgttggtcaaccgccagtgttagct
ccagccccgcccctgagctgtcaatcacagacccctccaggtcaggcctcaggaaccact
ggtcgtcaggtactaactgccatctaccctgcaccaaccattgcactggctactggcgtg
gtctctgtgacaaccatgccgcccacagtggctgccccagcccaggacattataaacccc
tcctctccattggcgacgggggtgcagggttcagcggtggcgacccctcaggctaacctg
gcagaggaggtggagccgaaggtggaggttaagagggagagccaggtggatgaggatgga
ggacacgggttgtcgagctgtgctgtcagctcctcattcgccacctgtatgagtaatgcc
acagcagttaaaaaagaggaggatatcagtctgcacatcaaagaagaaaatctgagagat
ggacacagcagagagacacgaagcgagatggacagagagagagggatgaaggagaacaat
gaaaagaagagaggcagagagacagacagacaggaccacagcatgggtgacagcagcaaa
gaggctggacctcgttcccctcctccaccaccctcaggtttggacccccctccccctccc
cctgcggaaagagaacctccctcttcctcaaaaaagaccaagtttcgacccccaccgctc
aaaaagacacctgactctctcgacaaggtcttgtcggagacgtactttgaggagcgtttt
gctgagcttccagagtttaacccagaagaggtccttccttcgcccactctgcagagtctg
gccacctcaccaagagccatcctgggaagctaccgcaggaagagacgtaactccaccgag
ctggagctgacagcagaagaccccagctccccaaggaggaagactcgacgtctctccagc
tgcagctcggagcccaacacccccaagagcgctgtcaagtgtgagggagacatcttcacc
ttcgacagaccaggtacagaaggagaggatcttctaggagatttggaccgggtcccctac
tcgtctctgcgtagaactctggatcagcgccgtgccctggtcatgcagctgtttcaggaa
catggcttctttccctcagctcaggccactgctgccttccaggcacgttactcggacacc
ttccccaccaaggtgtgtctgcagctgaagatccgcgaagtccgtcagaagatcatgcag
acggccacgcccggaaccctcgaacttggagggtcagccgaagccaacctcgccccgccc
cacagctcctctttcaatcaatcagcccgggaggacggaggggcggagcagcaaggagac
aaaggccgaagcccagaggagccgaaaagtgaaggatcctaa
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integrated database retrieval system
