Siniperca chuatsi (mandarin fish): 122864458
Help
Entry
122864458 CDS
T08948
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122864458 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122864458 (sfpq)
03041 Spliceosome [BR:
schu03041
]
122864458 (sfpq)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122864458 (sfpq)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122864458 (sfpq)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122864458 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
122864458
NCBI-ProteinID:
XP_044027847
LinkDB
All DBs
Position
LG17:complement(6517355..6539086)
Genome browser
AA seq
721 aa
AA seq
DB search
MGNLDSSKSHLIRSPTNCLFQKILNFLVTPPAEQRTNERSGAVLTVLEKERPLYAQPLVA
ILRSLTCKYRNRGGVGMNNFQQRRGSGPGGPMRGGLMGNPNFRSHPFQNQNQNRRGPNNN
FNRPPNQGPQLTPQKPQQNQSLPIIPPPSPGPALTMKGPMQQQQPPAQQKQEQQRTPTTP
TPPPKIQSPPPKPNMTSPQPNQANKNQNQNQQLKSPVGNANGQQQKQPPHPSPKPGPQQG
PKPSPQQGPKPGPQPGPQPGPQQGPKPGPQQGPKPQGQRTGPPMMNREVPENRATNSAAA
ESDGSHPKEFRATLSMLLKPGEKSYTQRCRLFIGNLPNDITEEDFKKLFAKYGEPSEVFI
NKGKGFGFIRLESRALAEIAKAELDDIPMKGRPLRVRFATHSAALSVKNLSPFVSNELLE
EAFSQFGMVERAVVIVDDRGRSTGKGIVEFASKPAARKALDRCNEGVFLLTTQPRPVVVE
PLEQFDDEDGLPEKLAQKNPRYQAEREEPPRFARPGTFEFEYSKRWKSLDEMEKQQRQQV
EKNMREAREKLESEMEDAYHEHQANLLRQDLLRRQEELRRMEELHSQEMQKRKEMQLRQE
EERRRREEEMLRKREMEEQMRRQREENYRMGNFMDRDREMRMNPGGAMGMGDMPFGASNQ
KFPMGGLGFEGQQGPSSGGLMGNEMRNERFAQGGPRGMGPGNPGYGRVREEFDGPSKKPR
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatttggatagctcaaagtcacatttaataagaagtccaacgaattgtttgttt
caaaagattctgaacttcctggtgacgcctcctgctgagcagcggaccaatgagcgtagc
ggggcggttctcactgtgctggagaaagaaagacccctctatgcgcaaccgttagtcgcc
attttgaggagtttgacctgcaaatatcgtaatcgcggcggcgttgggatgaataatttc
cagcaacgcagaggcagtgggcccggcggcccaatgcgaggtgggctaatgggaaaccca
aatttcaggagccatcctttccaaaatcagaaccaaaatcggaggggaccaaataataac
ttcaacagaccgccgaatcagggcccacaattgactccccagaagccacaacagaaccag
tcgctgccaatcatccctccgccgagtcccggcccggctctcacaatgaaaggcccgatg
cagcagcagcaaccaccggcacagcaaaagcaggagcagcagcggacaccgacaacccct
acgcctccgccgaagattcagtcacccccgccgaaacctaacatgacctcccctcagcct
aaccaggcaaacaaaaaccagaaccagaaccagcagctgaagtcaccggtgggaaatgct
aacggacagcaacagaagcagcctccacacccgagcccgaagccaggtccacagcaaggc
ccgaagccaagtccacagcaaggcccgaagccaggtccacagccaggtccacagccaggt
ccacagcaaggcccgaagccaggtccacagcaaggcccgaagccacaaggccagaggaca
gggccaccgatgatgaaccgggaggttccggagaatagggccacaaacagcgctgcagcc
gagtcagacgggagccatccaaaggagtttagggcaacactgtccatgctgctgaaaccc
ggtgagaagtcgtacacacagcggtgccgtctgttcattggcaacctgcccaatgacata
acggaggaagatttcaagaaactgttcgcgaaatatggggagcccagcgaggtcttcatc
aacaaaggcaaaggctttggtttcatccgattggagtcccgtgcacttgcagagatagca
aaagcagagttggatgacatacccatgaaaggcagacccctgcgtgtccgatttgccaca
cactccgcagctttgtctgtgaagaatctgtcgccgttcgtttccaatgagctcctggaa
gaagctttctcacagtttggaatggtcgagagggctgttgtcattgtagatgaccgtggg
cgctccacaggcaagggcattgtcgagtttgcctccaaacctgctgctagaaaggcactg
gatcgttgcaatgagggtgtctttctgctcaccacgcaaccccggcctgtcgttgtcgag
cccctggagcagtttgatgatgaagatggtcttccagagaaattggcacagaagaacccc
agatatcaagcagagcgcgaggaacctcctcgttttgctcgtccaggcacttttgaattt
gagtactccaagcgctggaagtccctggatgaaatggagaagcagcagaggcagcaggtg
gagaagaacatgcgtgaggcccgtgagaagctggagagtgagatggaggacgcttaccat
gagcaccaggctaacctgctccgacaagatctgctgagacgacaggaggaactgcggcgc
atggaggagttgcacagtcaggagatgcaaaagaggaaggagatgcagctcagacaagaa
gaagagcgacgcaggcgggaggaggagatgcttcgcaagagggagatggaagaacagatg
cgccgccagcgtgaagagaactacaggatgggcaacttcatggatagggacagggaaatg
agaatgaatccgggtggagctatgggcatgggtgatatgccctttggtgcatccaaccag
aagttccccatgggtggactgggctttgagggacagcagggaccatcatcaggaggcttg
atgggcaacgaaatgcgcaacgagcgcttcgcccagggcggtcctaggggaatgggtcct
ggtaaccccgggtacgggagggtccgcgaggagtttgatggtccttctaagaaaccccgt
ttttaa
DBGET
integrated database retrieval system
