Siniperca chuatsi (mandarin fish): 122864468
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Entry
122864468 CDS
T08948
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122864468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122864468
03016 Transfer RNA biogenesis [BR:
schu03016
]
122864468
03012 Translation factors [BR:
schu03012
]
122864468
04131 Membrane trafficking [BR:
schu04131
]
122864468
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122864468
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122864468
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122864468
Translation factors [BR:
schu03012
]
Eukaryotic type
Elongation factors
122864468
Membrane trafficking [BR:
schu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122864468
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122864468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
122864468
NCBI-ProteinID:
XP_044027863
LinkDB
All DBs
Position
LG17:complement(6650826..6654612)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEGSDKMGWFKGWKIERKEGNASGTTLLEALDAILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPCLTTEVKSVEMHHESLP
EAVPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKGADNFNAQVIILNHPGQINAGYAPV
LDCHTAHIACKFKELIEKIDRRSGKKLEDQPKFVKSGDAAIVNLVPQKPMVVEPFSSYPP
LGRFAVRDMRQTVAVGVIKAVEFKEVSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctctactggccatctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagtttgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgacattgctctgtggaagttt
gagaccagcaagtactacgtgaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgactgcgctgtgctgatcgttgctgctggtgtt
ggtgagttcgaggccggtatctccaagaacggccagacacgtgagcacgccctgctggcc
ttcacccttggcgtgaagcagctcatcgttggagtcaacaagatggactccaccgagccc
ccttacagccaggcccgttttgaggagatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctgggtggcacggagacaac
atgctggagggcagtgacaagatgggctggttcaagggatggaagattgagcgcaaggag
ggtaatgctagtggaaccacactgctggaggctcttgatgccatcctgccacctgcccgc
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaaaatcggcggtattgga
actgtccccgtcggtcgtgtggagaccggtgtcctgaagcccggtatggtcgtcaccttt
gctcccccctgcttgaccactgaggtgaagtctgtcgagatgcaccacgagtctctgccc
gaggctgtccctggtgacaacgtcggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgtcgtggatacgtggctggcgacagcaagaacgacccacccaagggagctgacaacttc
aacgcccaggtcatcatcctgaaccaccctggccagatcaatgcaggttacgcccctgtc
ctggattgccacacagctcacattgcttgcaagttcaaggagctcatcgagaagatcgac
cgtcgttctggcaagaagcttgaggaccaacccaaattcgtcaagtctggagacgccgcc
atcgtcaacctggttccacagaagcccatggttgtggagcccttctccagctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagacggtggccgtcggcgtcatcaaggct
gtggagttcaaggaagtatccggaaagacaaccaaggctgcagagaaggcccagaagaag
aaatga
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