Siniperca chuatsi (mandarin fish): 122864725
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Entry
122864725 CDS
T08948
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122864725 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122864725 (fancd2)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122864725 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
122864725
NCBI-ProteinID:
XP_044028282
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All DBs
Position
LG2:complement(18318007..18333265)
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AA seq
1453 aa
AA seq
DB search
MMRKKRRSSVDKGEGATTTTKAKKSRSTGRQPKEPAPEETNESVFAVFLREAGVTLKQGG
TSNEIAVDQVVFQKRIQQQLQKSPRYPGIVQEFTTGLESHIEDPERFRNCLLPCVPRLSD
GDSSSVSSFQESLLRMLLGIEMLQTFIINTLLEKLPEFMFDGTGDGGLSIPRIVINQLKW
LDRVVDSKELAAKLMELVSVAPVEVQRDIITSLPEILEDSQHNDIARELNSLFQENTQLT
VPILDALSSLNLSSSLLTEVRGAVMVTLAAVQLEDLPVVVKFILHSVSASDAYEVVCNLR
KKLELEQCILPPVLQASQSRMKNNGSVTSAATPAAGSSQDSVVLILDGIKSAVRFQKTIS
EAWLKAIESVDEVEDHKVIDLLVLFILHSTNANQSRRGAERVLKVKVRTGLIQEALLQKT
FRDYSQVMRGYFLSILALAQSLLRSPDPCVVPFGGHMYRLSFTAFDSYCQQEVVGSLVTH
VCSGVGGEVDMALELLCGLVTEKPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSRLA
FGQQQQGSHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMIVGSMGASRLKVKESQNESLP
QEMLRQVTALLELVKSSSESSPEAAALYYDELANLILSCTLDPQVQETIATSVLDDFQDD
FVVDLGPEISGSFPFPACVMYNLDEEESQEGIAINLLPLLAKDIQNKGEQQSQTKKAHKR
VSPLCLSPFFRLLRLCEEKQHQGDLEEIDALLGCPLILTDMDIVEKIESLSKAEREFLCA
LLFHTINWFREVINAFCRQKEIEMKMKVMTRLQNITYLQTLLERALAGTPGYIPPVANFD
GESTDGIILSSTAPVNKAKKDGSGKKRKGPGKNSSESSSQLEEATEADKTQQEQPEKEKE
KEIRQGVSLVSYRQFFRELDMEVLSVLQCGLLSRSLLDSELHTKVREEVLLGPAELVFLL
EDMLRKLEFSLTGAPAKRVSFFKGRTDKSVGFSHLQQRSSKDIASCCVQLLPALCSHLEN
CHNHFQTLLSENNGVVDGPATDVQEHQLMSSGYQLLLQVLNTTFSWSGFNQPGQRSLLKK
ALGVLAGRLKEGGAELTLEQLVKHSFEYLVNFRSTMPSLSTALCLSQLLSTVSEKGGNPA
AYREQTTSLAKRFLSQDWVTASGEKERGNKFNEALHTLLSIYLERVEDVLKAVEEIAGEG
ISELLNASKEESSASWPTLNRQTFLVFYKVLMAELEKAAKKIPAYKISDNSEAQSEKLLT
WNLAVRDFHILVNLVKVFDSRPVLNVCLKYGRLFLESFLKLGMPLLDNSFKRHKENVQSL
LKTFQLSTRQLHHLCGHSKIHQDMSLTNHVPALKKSLELFVYRVKAMLTLNNCQEAFWIG
NLKNRNLKGEEILSQRSQGSEEEEEEEEEEEEQHSLLPQEQSEDEAKETYSEESRTVNRE
EDVDQDDITDDSD
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaaaaagcgacggtcctctgtggataaaggagagggagctactacgaccact
aaggctaaaaagagtcgtagcactggtcgccaaccaaaggaaccagctccagaagagaca
aatgaaagtgtgtttgcagtctttcttcgagaggcaggtgtcaccttgaaacaaggtggc
acatccaatgagattgctgttgaccaagtagttttccaaaaaaggatacagcaacaacta
cagaagagccccaggtaccctgggattgtacaggaattcaccactggtttggagtctcat
attgaggaccctgagcggtttaggaactgcctccttccatgtgtcccacgattgtctgat
ggagactccagtagcgtcagctcattccaggaaagtctgctacgcatgctgttggggatt
gagatgctgcagacttttatcattaacaccttgctcgagaaactccctgaatttatgttt
gatggtactggagatggaggcctcagtattcctcgcatagttattaaccagcttaaatgg
ctggacagagttgtggacagcaaggagttggcagcgaagcttatggagctcgtgtcagta
gcaccagtggaggttcagcgtgacatcatcaccagtctgccagagatactggaagactcc
cagcacaatgatatagccagagagctcaactctttattccaggagaacactcagttgact
gttcccatcctggatgccctgtctagtctgaacctcagttcctcattactgactgaggtt
cgtggagccgttatggtcactttggctgctgtgcaactggaagacctacctgtggtggtc
aagttcatcctgcactctgtctcagcctctgatgcatatgaggtggtgtgtaatcttcgt
aaaaagctggagttggagcagtgcattctccctcctgtgctgcaggcctcccagagccgc
atgaagaacaacggatcagtaacgtccgctgccacaccagcagctggcagcagccaggac
agcgttgtattgatactggacggcatcaagtcagcagtgcgattccagaaaaccatatct
gaggcttggctcaaggcaatcgagtctgtggatgaagtggaggaccataaggtaatagat
ctgctggtgctgttcatcctccactcaaccaatgccaaccagagccggcggggggcagag
agggtgctgaaggtgaaagtgaggactggactgatccaggaggctctgctccagaagacc
ttcagggactattctcaggtcatgcgagggtatttcctctccatcctggctctggctcag
agtttgttgcgctcccctgacccctgtgtggtgccttttggtggacacatgtaccgactc
tcattcactgcttttgactcttactgccaacaggaagtggtgggctctttagtgacccat
gtgtgcagtggtgtgggtggggaggtggacatggctctggagctgctctgcggcctagtt
acagaaaagccctcagaaatggccctgtatgctgtttttgtcaagggtatcttggactac
atggacaacctcacaccccagcagatccgcagactcttccaccttctgagcagactggcc
tttgggcaacagcagcagggatcacacatccaggatgacatgcacatagtgatccgcaaa
cagctctccagcactgtacccaagtacaaacgtattggcatcattggtgctgtcatgatt
gtaggcagcatgggggcctccaggctcaaggtgaaggagtcacagaatgagtcgctaccc
caagagatgttaagacaggtgacagccctgttggagcttgtgaagtcgagcagtgaaagc
tcacctgaggctgcagctctgtactatgatgaactggccaacctgatcttgagctgtacc
ctggacccacaggtgcaggaaacgatcgcaacgagtgtcctagatgacttccaggatgac
tttgtggtggacctagggcctgaaatatctggttcctttccctttccggcctgtgtgatg
tacaacctggatgaggaggagagtcaggaaggcattgccatcaacctgctgcctctactg
gccaaagacatccagaacaaaggagagcagcagagtcaaaccaagaaggcacacaagcga
gtgtctcctctctgtctgtctccattttttcgcctcctgagactctgtgaggagaaacag
caccaaggagaccttgaggagattgacgccttgctgggctgccctctgatcttaacagac
atggacatagtagagaaaatagagagcctgtcaaaagctgagagggagttcctctgtgct
ttgctgtttcacaccatcaactggttcagagaggtcataaatgcattctgtagacaaaaa
gaaattgagatgaagatgaaagtgatgactcgcctgcagaacatcacctaccttcagaca
ctgttggagagggctttggcaggaacacctggctatattccacctgtcgccaactttgat
ggagaaagcacagatgggattatacttagttccactgctcctgtgaataaggcaaagaaa
gatggctcaggaaagaagaggaagggccctggtaagaattcctcagagagcagctctcag
cttgaggaggcgactgaagcagacaaaactcagcaggaacaaccggagaaggagaaagaa
aaagagatccggcaaggtgtcagtctggtgtcctacagacagtttttcagggagctggac
atggaggtgcttagtgtgctgcagtgtggcttgctgtcccgctcactgctggactctgag
ctccacaccaaggtgcgagaggaggttctgctaggtcctgctgagctggtgttcctgctg
gaggatatgcttcgcaaactggagttcagtcttacaggtgcccctgctaagagagtttct
ttctttaagggaaggactgataagagtgtgggcttctcccatctacaacagaggagctcc
aaggatattgcttcctgctgtgtccagctgctgcccgccctctgctcacacctggagaac
tgccacaaccattttcagacactgctgtctgagaacaatggtgttgtggatgggcctgcc
acagatgttcaggagcatcagctgatgtcatcaggctaccagctgctcctgcaggtcctg
aacaccaccttcagctggtctggattcaaccagccaggacagcggagcttactgaagaag
gctctgggagttttggctggacgactgaaagagggaggtgctgagttgaccctggagcag
cttgtaaaacacagctttgagtacctggtgaacttccgcagcacaatgccaagtctcagc
acagccctgtgtctctcccagcttctgtccactgtgtcggagaaaggagggaaccctgct
gcctacagagagcagaccacttccctagcaaaacgtttcctgagccaagactgggtgaca
gccagcggagagaaggagcgagggaacaaattcaacgaagcacttcacactctcctaagc
atctacctggagcgtgttgaagatgttctgaaggcagtggaggaaatagctggagaagga
atctctgagctcctcaatgcatcaaaagaggagagctctgcatcatggcccacgctcaac
aggcaaacattcctggtgttctataaagtgttgatggcagagctggaaaaggctgccaag
aagattcctgcttacaaaatcagtgacaacagtgaggctcagagtgagaagctgctgaca
tggaacctggctgtcagagattttcatatcctggtcaacttagttaaggtgtttgattct
aggccggtgctcaatgtgtgcctaaagtatggccgccttttcctggagtcattcctgaag
ttggggatgccactactggacaacagtttcaaaaggcacaaggagaatgtccagagcctg
ctaaagaccttccagctcagcacccggcagctccatcacttgtgtggacattctaagatt
caccaggatatgagcctgaccaaccatgtaccagccttgaagaagagcctggagttgttt
gtttacagagtgaaggccatgctgacactcaacaactgtcaggaggcattttggattggc
aacctgaagaatcgcaacctgaagggtgaagagattctttctcagaggtcacaaggaagt
gaggaggaggaggaggaggaggaggaggaggaggagcaacattcactgctgcctcaggaa
cagtcagaggatgaggcaaaggagacttactccgaggaaagtaggacggtcaacagagag
gaagatgtggatcaagatgatattacagatgactctgactaa
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