Siniperca chuatsi (mandarin fish): 122864983
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Entry
122864983 CDS
T08948
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122864983
Membrane trafficking [BR:
schu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122864983
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_EndoS
V-set
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
122864983
NCBI-ProteinID:
XP_044028774
LinkDB
All DBs
Position
LG17:complement(13243402..13248663)
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AA seq
699 aa
AA seq
DB search
MDDTAAVTSVSYHLGLLQHCKQHKYKLKIVDIHSLTKMIQHHHLTTFGHILLCFLSYFFF
SICKSTKTGPSISSCLVMKIYFLLSKAGHQMFEGIAVHQWLCWGALYLLAAGVALTSETR
RPCPQPCRCNTVLLEVNCSDSQFTTVPDSLPQDTKLLNLTHNKIKTLVHQQFKTLTRLLQ
LDLSDNIMVIIEVEAFLGLQSLTTLRLARNHLKIIPVGAFAGLPKLKLLDVSGNEILVLL
DFTFRGLAALQFIKAADNDLVFISHQAFTGLTSLQELHLDGCNLTAVPTEALTQLGGLRS
LYFHRLGLTTLPNYSFRHLEHLKELVISHCPWLETLSGNSLFGLNLTSLTIRHCNLSAVP
YIPLHHLVYLVYLDLSFNPITYIHGNRLGDLLRLQELRLVQGSLLRIEIGAFRGLAHFKL
LNVSRNLLTTLEVGAFHSVDTLKTLGLDNNPIACDCRLLWVVQRRLHLDFGGNPPTCSTS
VQLQGWNFLDFTEAELPGLLTCRPPRILNRKPQEVRVDQGHTVVFYCNAEGDPLPSVTWL
NPQLKPLSPIGRIRALSNGSLEVRYAQPQDSGTYLCVASNAAGNGSLPVSLHVRAFPSSS
KNPFRLKGWFAFPSASPGVNGNQKLPFDVKTLLIAATIGFLSFFGSVSVCFIFMFFWSKS
KGQIKHTATIAYVPRSAISSSNGGTGNYMETSRFTMKLI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacagcagctgttacctctgtctcttatcatcttggattattgcagcactgt
aaacaacataaatataaactgaaaatcgttgacattcacagtttgacaaagatgattcag
catcaccatctgacaacatttggccacatcttactttgctttctttcttattttttcttc
agtatctgtaagtcaacgaagacaggaccctccatcagcagctgtctggttatgaaaatc
tacttcctgttatccaaagcaggccaccagatgtttgaggggattgctgtccaccaatgg
ctgtgctggggagctctttacctgttggcagcgggggtagcattaacatctgaaactcgt
cggccgtgcccacagccctgccgctgcaacaccgtgctgctggaagtgaactgctctgac
agccaattcaccacagtgcccgacagtctcccacaagacaccaaactgctaaacttaaca
cataataagatcaagactctggtgcatcagcagttcaagactttgacacgacttttacag
ttggatttgagtgacaatattatggtaataattgaagtggaagcctttctcggcttgcaa
agtctgacaactctgcgtcttgctcgcaaccacctgaagattattcctgtaggagcattt
gctggtttgccaaaactgaagttactggatgtaagcggcaatgagatccttgttttgcta
gattttactttccgtggcttggctgccctgcagtttattaaagcagcggataatgactta
gtttttatctctcatcaagctttcactggcttaaccagtctgcaagagctgcaccttgat
ggctgcaacctcacagctgtgccgacagaggcgctcacacagcttggtgggctgagaagt
ctttattttcaccgactgggcctcaccacgctgccaaactactctttccgtcatctagag
catctcaaggaacttgtcatttctcattgtccctggctggagaccctgtcaggaaacagt
ctcttcggcctaaatcttacatccctcaccatcagacactgtaacctcagtgctgtccca
tacatcccgttgcatcatcttgtatatcttgtataccttgacctttcttttaatccaatc
acctacattcatgggaaccggcttggagacttgctccggctccaagagcttcgtctggtg
cagggatcattgcttcgcatcgaaatcggagcattcaggggtttagcacatttcaaattg
ctgaatgtatctagaaaccttctcaccacccttgaggtgggagcttttcattcagtggac
accctaaaaactctgggacttgataacaacccaatagcgtgtgactgccgtttgctgtgg
gtggtgcaaagacgactacatctggactttggtggaaatccaccgacttgcagtacgtca
gtccaattgcagggctggaattttctagactttactgaagctgagctcccaggcctgctc
acatgtcggccgcctcgcattctgaaccgcaaacctcaagaagtgagagtagatcaggga
cacacggtggtgttttattgcaatgcagaaggtgaccctctgccatctgtcacctggcta
aacccacagctaaaacctctatcacccattggtagaatacgggctctctctaatggctcg
ctggaggttcgctatgctcaacctcaagatagtggcacttatctctgtgtggcatccaac
gcagcaggaaatggcagcctgcctgtcagccttcatgtccgagcctttccatcatcttct
aaaaacccctttcgtcttaaaggttggtttgcctttccctctgcctctccaggtgtgaat
ggtaatcagaaactcccatttgatgtcaagacgttgctgatagcagcaaccattgggttt
ctctcatttttcggctctgtgagcgtatgcttcatctttatgttcttctggagtaagagt
aaagggcaaataaagcacacagccacaatagcatatgtgccacgaagcgccatttcaagt
agtaacggagggacaggcaactatatggaaacaagcagattcaccatgaaactaatatga
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