Siniperca chuatsi (mandarin fish): 122865182
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Entry
122865182 CDS
T08948
Symbol
cacna1bb
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122865182 (cacna1bb)
04020 Calcium signaling pathway
122865182 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122865182 (cacna1bb)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122865182 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122865182
NCBI-ProteinID:
XP_044029189
LinkDB
All DBs
Position
LG18:complement(21268854..21447625)
Genome browser
AA seq
2555 aa
AA seq
DB search
MKRTVPLNSRWAERRSTVVYAVRAATLGSWRMLTLGAEYEDTWAPSPDRSRPPGQRVEKE
PGPAEGADACAGDPEETSWRAVDTVQKYDTVLHLDGLSRAGRRDGVRQIVRKHDTLNSTP
WPRGMARFAEDLPTRYGGSAGGGGRGGPGAGRGGARGGGAPGGQRVYKQSMAQRARTMAI
YNPNPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHL
PASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGI
LATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFA
IIGVEFYMGKFHTTCFKIDTGERAVDWPCGLEPPARTCPNGTQCREYWTGPNFGITNFDN
ILFAVLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEF
AKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYK
RKQNLPVLKRGKVKKGKNDLIGAEEGEDHFADISSVPPPGSPFGRASVKSSSKMDSSSYF
RRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTRALYTAEFVFLGL
FLTEMTLKMYGLGARNYFHSSFNCFDFGVIVGSICEVIWDMIKPGASFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGHFKTTDTGFGR
FNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTL
FGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISI
AAFVKQNRDALSRRSSINSIQSLSYTVYSSPARRILSKEQQRSAKAMSVWEQRTNQLRRH
NMRASSEALFNELDPEERLRISSALHLHPDMKTHLDRPLVVEARDGDKPSRPPEGGREEA
GDPQQDGLGDNFHTHSRKHHRHRDKNGESRDGGTAGGGRHHTHHSRNRDHNGDGAQTKEW
RGERSHSRDGGQGHRHHHQAGSPEEEANDVRGGGEERGHRHHHSHRPLKEGNGMIANGAQ
GERRGKGGGGGDSNGERKGRCSRMVRAQSTLDGEDYNRNKNGTKGYRERQPDAEEDGLAS
SPLQPMRSSLSLGEKQEDADNQKNSTRASQAGLNSNAIHIPVTITAPPGETTIIPMNNID
CDNFRLSDEKKDLEEEEEANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYFEMCILMV
ITMSSIALAAEDPVQANAPHNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLD
YDRDDVEAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATYEDQGPSPGF
RMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKP
LTRYMPENKQSFQYKMWKFVVSPPFEYAIMTLIALNTVVLMMKFYGAPDLYESMLKYLNI
VFTALFTLECFLKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEVKTDKMINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELIEE
TAINHHNNFQTFFQALTLLFRSATGEAWHEIMLACLSNRPCDKLSGTVGKECGSDFAYFY
FVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRICYQ
DMYKLLRFISPPLGLGKKCPNRVAYKRLVKMNMPIADDNTVQFTSTLMALIRTALEIKLA
SGVLAQRLCDADLKRELNRVWPNLSQKTVDLLVTPHKYNELTXGKVYAALMIFDYYKQNR
AKRLQQQHSSGGPQSKLGALFRPVLPLTHILEVEPPMSSPKQPLPPYPEPQAKPEALPTT
TTTAITTSVNRDTILNQRSAIKHSQSGDVSQAAQRPKGRRKLQRGQSEDVPYSTRPQELK
QVENISDTEGYPSLEGHCRAASLPRLNAEYYRSHPRHAPGTHLAPIVDLSPIRRSASSLT
QQGYREVGLREYDLERPGLVQPSARPGQVQGQDRVHHHHHHHRCHRRRDKDKDKKQKSLD
RSTSVQPSSTVGSFTDPSAEGLSRERARERDRSRPHERRHHSSAGEKQRYYSCERYGSRE
QCHTKSAGPSRSTSPAEGQDTGLLKQHGSSVVRAGLVTLPSGSSTPGRGRRQLPQTPLTP
RPAVAYKTTNSSPLPPGASTATMGHQTRFSRGLSEHDRLFGGHDESLIPVTRIGSDPNLN
RQPQVTSQQALLEEAEDFQDTVSSHGGGRSARIAASTTASASHGTAAVPVTAPTMQGRAG
VVPNGYHFTLGVNSASGPGSRGTGSFREREEEDWC
NT seq
7668 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacagttcctctcaactccagatgggcagagagacgatctactgtggtttat
gcggtacgcgctgccacattgggctcctggaggatgcttacattgggggcagagtacgag
gatacctgggctccgtcacctgacaggagtcgccctcccggtcagcgggtagagaaggag
ccggggcctgcggagggggcagacgcctgcgctggagacccggaggagacgtcatggaga
gccgttgacaccgtgcagaagtatgacacagttttacacctggacgggctgagcagagcc
gggaggagagacggtgtgcgtcagatcgttcgaaagcacgacaccctgaacagcacgccg
tggccccgcggaatggctcgcttcgcagaagatctacccacccgctatggaggaagcgca
ggcggcggagggagaggtggaccgggcgccgggagagggggagcccggggtggtggcgct
ccgggtggccagagggtgtataagcagtcgatggcccagagagcccggacaatggccatt
tacaacccgaaccctgtcaaacaaaactgcttcactgtcaaccgctccctcttcatcttc
cgcgaggacaatctcatcaggaagtatgcaaagcgaataacagagtggcctccatttgag
tacatgatcctggctacaattatcgccaactgcatcgtcttggccctggagcagcatcta
cctgccagcgacaagacacccatgtcagaacgcctggacgacacagagccctactttatt
ggaatattctgtttcgaggctgccattaagatcatcgccctgggctttgcatttcacaaa
ggctcctacctccgcaacggctggaatgtaatggacttcgtggtcgtcctcacgggaatc
ctggccacggtgggttcggactttgacctgcgaacactgcgagcggtgagagtgctgaga
cccctgaaactcgtgtcaggaatccccagtctccaggtggtattgaagtccataatgaaa
gccatggttcctctgcttcagatcggcctgctgcttttcttcgccattgtaatgtttgcc
atcatcggggtggagttttacatgggcaaattccacaccacctgcttcaagatagacact
ggtgaaagagcagtagactggccctgtggtctggaacccccggccaggacatgtcccaat
gggacccagtgcagggagtactggactggacccaactttggtatcaccaacttcgacaac
atcctgtttgcagtgcttactgtgttccagtgcatcactatggagggctgggtggacatc
ctttacagcaccaatgatgtagcaggaaacacctggaactggctctacttcatccctctc
atcatcatcggctccttcttcatgctcaacctagtgcttggtgtcctatcaggagaattt
gccaaagagagagagcgtgtggagaagaggcaggagttcctgaagcttaggaggcagcag
caaatcgagagagagctaaccggatatttggaatggatctgcaaagcagaggaggtgttg
ctagaggaggaggatgagattgcagaggagaagtccccgctggatggtgcgtggtacaag
aggaaacaaaaccttccagtcctgaaacgaggcaaagtcaagaaaggtaaaaacgacctt
atcggtgctgaggaaggggaggatcatttcgcagatatctcctctgttcctcctccgggc
tctccgtttggtcgggccagtgtgaaaagcagcagtaagatggacagctcctcctacttc
cggcgtaaggagaagaggacccggttctttatccgccgcatggtgaaagctcagagcttc
tactggatcgttctgtgtctggtgggcctcaatactctgtgtgtggccatagtccactat
gaccagcctgagtggcttacaagggccctctacacagcagagtttgtgttcctgggtttg
tttctgactgagatgaccttgaagatgtacggccttggagcaaggaattattttcactcc
tcctttaactgctttgattttggggtgattgtgggaagtatttgtgaggtcatctgggac
atgattaaaccaggagcatcgtttggtatcagtgtgctgagagccctgcgacttctcagg
atattcaaagtcaccaaatattggaactcgttgaggaaccttgtggtttccctcctcaat
tccatgaagtccatcatcagcttgctcttcctcctcttcctcttcattgtggtcttcgct
ctgctgggcatgcagctcttcggaggacatttcaagaccacggatacaggttttggcagg
tttaactttgaagatgagacgccaacaacaaactttgatacctttccagcagccatcctc
actgtgttccagattctgactggcgaggactggaacgccgtgatgtaccacgggatcgag
tctcaaggaggcgttcgccgcggcatgttctcctccgtctacttcatcgtcctcacgctc
tttggaaactacaccctactgaatgtcttcttggctatcgctgtcgataacctcgcaaat
gcacaggagctgactaaggatgaagaggagcaggaggaggcagccaataagaagcttgcc
ctgcagaaggctttggaggtgaaggaagtcagcccgatgtcagcagccaacatctcaatc
gctgcttttgtaaagcaaaatcgagatgcactctctcgcaggtcgtccatcaacagcatt
cagtcactgagttatactgtctactcctcccccgcccgacgaatcttgagtaaggagcag
cagcggtcagcaaaggccatgtcagtttgggagcagaggaccaatcagctgaggagacac
aacatgagggcgagcagtgaggctttgttcaacgagctcgaccccgaggagcgcctccgg
atctcctccgccctccacctgcatcctgacatgaagactcacctggaccggccgctcgtg
gtggaggccagggacggcgacaaacccagcaggcctcctgaaggaggacgggaggaggcg
ggggatccccagcaggacgggttgggagacaacttccacacgcactccaggaagcatcac
cggcaccgcgacaagaacggggagagcagggatggaggcacggccggaggagggaggcac
cacacccaccacagccggaaccgagatcacaacggcgacggtgcccagacaaaagagtgg
agaggggagagaagccacagccgcgatggagggcagggacacaggcaccaccaccaggcc
ggctcccccgaggaggaggccaatgacgtacgaggaggaggagaagaaagggggcatcgc
caccatcactcccatcgtccactgaaagagggaaacgggatgatagcgaatggtgcacag
ggagaacgcagggggaaggggggaggaggaggggacagtaatggagagaggaagggacgc
tgctctcgaatggtcagagctcagtctacactggatggagaggactacaacaggaacaag
aatggaaccaaaggttacagggagaggcagccagatgccgaggaggacggcctcgcctcc
agtcctctgcagccaatgcggagtagcctgagtcttggagaaaagcaagaggatgctgac
aaccagaagaactccacccgagccagccaggctggcctcaacagcaacgccatccacatc
cctgtcactatcactgctccgcctggagaaactaccatcatacccatgaacaacattgac
tgcgacaacttccgactcagtgatgagaagaaagatctggaggaggaggaggaggctaat
gggcctcggcagatccttccctacagctccatgttcgtcttcgggcaaacaaacccggtg
cggcggctgtgtcattacgtggtcaacctacgctactttgaaatgtgcatcctgatggtg
attaccatgagcagcatcgctctggcagccgaagacccagtgcaagccaacgcaccgcac
aacaacgttctcaagtatctggattatgtctttactggggtcttcacttttgagatggtg
attaagatgattgacttgggactgctcctccaccctggctcttattttcgtgacctgtgg
aacattctggacttcattgtggtcagcggagcactggtggcctttgcctgctcgagcctt
atgggatcgcaacaaagtgtggccagagggacgaaaggcaaggacatcaacaccatcaag
tccctgagggtcctccgagtcctgcggccgctcaagaccattaaacggctgcccaagctg
aaggcggtgttcgactgtgttgtaaactctctgaagaacgttcttaacatcctcatcgtc
tatatgctcttcatgttcatcttcgctgttatcgctgtgcagctctttaagggcaaattc
ttctactgcacagacgagtccaagggtctggagaaagactgcaggggtcaatttctggac
tacgacagggacgacgtggaagctcagcccagagagtggaagaagtacgagttccactac
gataacgttctctgggccttcctaacgctcttcactgtctccaccggagagggctggcca
ttggtactgaagcactccgtggatgccacttatgaggaccagggccccagcccaggcttc
cgcatggagacatccatcttttatgtggtctactttgtggtgttccccttcttctttgtc
aacatatttgtggctttgatcatcatcaccttccaggagcagggagacaaggccatgtcg
gagtgcagcctggagaagaatgagagggcttgtattgactttgccatcaacgccaagccg
ctgacgagatacatgccagagaacaagcagtccttccagtacaagatgtggaaatttgtg
gtgtcgcctccgttcgagtacgccatcatgactttaatcgccctcaacacagtcgtgctg
atgatgaagttctacggcgctccagacctgtacgagtccatgctgaaatacttaaacatc
gttttcacagccctcttcacactggagtgcttcctcaagattattgccttcggtccactg
aactacctgaaagcagcctggaatgtgtttgactttgtgactgtgcttggaagcatcaca
gacatcttggtcacagaggttaagacggacaagatgatcaacctgagtttcctgaggctg
ttcagagcggctcgtctcatcaagctgctgcggcagggctacaccatccgcatcctgctg
tggaccttcgtccagtccttcaaggctctgccgtatgtgtgcctgctcattgccatgctg
ttcttcatctatgccatcattggaatgcaggtgtttggaaacatcgagctgattgaggag
actgcaataaatcaccacaacaacttccagacctttttccaggccttgacccttctcttc
aggagtgcgacaggcgaggcgtggcatgagatcatgttagcatgtctcagtaaccggcct
tgtgataagctctcaggaactgtggggaaggagtgtggaagtgactttgcctacttctac
tttgtctccttcatcttcctctgctccttcctgatgttgaacctatttgtcgctgtcatc
atggacaactttgagtatctgaccagggacgcctccatcctggggcctcatcaccttgat
gaattcatccgcgtgtgggcagagtacgaccctgctgcctgcgggaggatatgctatcag
gatatgtacaaattgttgcgttttatctcgcctcccctgggcctggggaagaagtgccct
aacagggtggcttataagcgattggtgaagatgaacatgcccattgcagatgacaacacg
gtgcaattcacctccacactgatggccctgattcgcacagccctggagatcaaactggca
tctggggtcctggcgcagcgtttgtgcgatgctgacctgaagagggagttaaaccgagtc
tggcccaacctgtcgcagaagactgtcgacctgctggtgacgccacataaatacaatgag
ctgactngtgggaaagtctatgcagctctaatgatctttgactactataagcagaatcgt
gccaagagactccagcagcagcattcttcaggggggcctcagagtaagctgggggcgttg
ttccgtcctgtgctgcccctcactcacatactggaagtagaaccgccgatgtccagcccc
aaacagcccctcccaccctaccctgagccacaggcaaagccagaggcactgcccactacc
accaccaccgccatcaccacctcagttaacagggacacaatactaaaccagaggagtgcc
ataaaacattcccagtccggagacgtttctcaggcagcacagaggcccaaaggccgaagg
aaactacagagaggccagtcagaggatgtgccatattccaccagacctcaggaattgaag
caggtggagaacatttcagacacagagggatatccaagcctggaaggccactgcagagcg
gcttcgctgccccgactcaatgctgagtactaccggagccaccctcgccacgcccctggg
acccacctggcaccgatcgtcgacctgagtcctataagacgctcagcgtcctcgctgacg
cagcaaggctaccgggaggttgggctgagggagtatgacctggaacgacccggcttggtc
cagccatcagccaggccagggcaagtccagggccaggacagagtccaccaccatcaccac
caccaccgctgccatcgacgcagggacaaggacaaagacaagaagcagaagtccctggat
agatctacatcagtgcaaccgtccagcactgttggttcgttcaccgacccttcagctgaa
ggtttgtccagagagcgagcgagggagcgggaccgcagccggcctcatgagaggaggcac
cactcctcagcaggagagaagcagcgctactactcctgtgagcgttacggcagcagggag
cagtgtcacaccaagtctgccggtcccagtcgatccacgtctcccgcagagggacaggac
actggtttgctcaaacagcatggtagcagtgtggttagagccggccttgtaacgctcccc
tctggctcgagcactccgggccgtggtcgcaggcagctcccacagacgcccctcacccct
cgtcctgccgtggcctacaagaccaccaactcctcgcctctcccacccggtgccagcact
gctacgatggggcaccagactcgctttagccgtggcctttcagagcatgatcgcttattc
gggggccacgacgagtccctgataccggtcacccgcatcggttcggaccctaatttaaac
cggcagccgcaggtcacttctcaacaggccctccttgaagaggcagaggacttccaggac
actgtgagcagccacggagggggacgctctgccagaatcgctgcctccaccacagcctca
gcttcacacggaactgctgctgtgcccgtcacagcgcccaccatgcagggccgggcgggg
gtggtgcctaatgggtaccacttcaccctcggggtcaactctgcgtctgggcctgggagc
cgaggaacaggaagtttcagggagagggaggaagaggactggtgctaa
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integrated database retrieval system
