KEGG   Siniperca chuatsi (mandarin fish): 122865394
Entry
122865394         CDS       T08948                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03082  ATP-dependent chromatin remodeling
schu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122865394
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122865394
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:schu01009]
    122865394
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schu03021]
    122865394
   03036 Chromosome and associated proteins [BR:schu03036]
    122865394
Protein phosphatases and associated proteins [BR:schu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122865394
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     122865394
    SWI/SNF complex
     122865394
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    122865394
   PBAF complex
    122865394
   SWI/SNF complex
    122865394
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 122865394
NCBI-ProteinID: XP_044029697
LinkDB
Position
LG18:26115737..26138216
AA seq 368 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcaattggctttaagtaaaacgtttggccagaagccagtaaaatttcagttagaacaa
gatggggacttttacatggttgggtcggaggtgggaaactatctgcgtatgttcagaggc
tctctgtataaaagatatccatctttatggaggaggctggcctcagtggaggagaggaag
aaaatcgtagcatcatcacatgccactagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgagggtaatgatgagaaatacaaggcggtgtccatcagtacagagccccca
gcttacctcagggagcagaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctctcaccatctagatgcagtgccttgctccaccaccatcaaccgcaaccggatgggc
cgtgacaaaaagaggaccttccctttgtgctttgatgaccacgaccctgcagtgatccat
gagaacgcagcccaggtagaggcactggttcccattcgtctagacatggagatagacgga
cagaaactgagagatgcattcacatggaacatgaatgagaaactgatgaccccggagatg
tttgcagagattttatgtgatgacctggacctgaatcctctggcctttgtccccgccatt
gcctcagccattcgtcagcagattgagtcctaccccactgacagcatactagaagagcag
gcagaccagagagtcatcatcaagctgaatatccacgtggggaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactcacccgagtcgtttgcactgaagctg
tgctctgagctgggtctgggcggagagtttgtcaccactatagcctacagcattcgcggt
cagctcagctggcaccagaggacctatgccttcagtgagaacccactccccacagtagag
attgccatccgcaacacgggcgatgcagaccagtggtgccccttgctggagaccctcaca
gatgctgaaatggagaagaagatccgagaccaagataggaacacaaggcgtatgagacga
ctggccaacaccgctccttcctggtag

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