Siniperca chuatsi (mandarin fish): 122865443
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Entry
122865443 CDS
T08948
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122865443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122865443
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
122865443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_CCN
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
122865443
NCBI-ProteinID:
XP_044029845
LinkDB
All DBs
Position
LG1:complement(27986468..28028546)
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AA seq
953 aa
AA seq
DB search
MVIRNVSHLKNPGAMQGACVWIVRVSVLLLLLWSDPLDCQHTTDHRKVTQRAEPQQEIRA
EHGEIQGSWGTWGPWSTCSRTCGRGVQEQSRPCLPAYTPSQYHSRRAGVLPQQPGRVISA
LRPTAPLPRDTGRSSNSSSRGEPRQEKETRSGGRRRVTHIIPGRYSYGRAPYVAPLQTDT
GQGSGKARRQRHSAAADTHHQTTRGHGGHRSNSMDLSNIVHHYSRPYMQPRAQQPKNSQV
WAPLYQPGSANQAQVQQELQSGSQTSGPQQHQERPYNPLPTSFCIGEHARYSICNNNACP
PSSRHIRAVQCSSYNNQPFMGRLYEWEPFNEVPGDQHCELNCRAIGFRFYVRQSDRVIDG
TPCGQNETSLCVAGKCASLGCDEYLGSGKVMDKCGVCGGDNTTCRLVSGVFKHSLSKVGY
HKIMEIPEGATKINVTEMVKSRNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRP
NEIRSTAGESFVAEGPTNEILDVYMIFQQPNPGVHYEYILPSEKPVDPQQPNHRPDGNDN
QVPVVQPPRRPREYNWKLAGATECSASCGKGFRYSIFHCVSRLNHVQVSDALCDSSSRPT
PQEEACNLQPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQIYANRTLNVHTSRCRHLERP
EIASTCQLKICSEWQIRSEWTACSVPCGLGQRSREVRCVSNVGDFVPDEECNMNLRPIDV
ENCDMGTCAKSWFYTEWGNRCSAECGMGVRTRGILCLTNHISSLPLEGCGSEQPADSQVC
NNGPCENRIEWFTGPWSQCSAECGAGSQQRSVVCLMKSDEGFTIMPLYECSSLERPLSQQ
SCNLKACGAKWYHTDWSVCSKTCGGGFRVREVRCLSDDMQSSEGCEEQLRPAKKEDCNPE
PCIPHIDENCRDKYFNCNVVVQARLCVYDYYKMTCCASCSQVAHRQSIHRGRS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggtgattagaaatgtgtcccacttgaagaatccaggagccatgcagggagcctgtgtc
tggattgtcagagtttctgtcctcctgctgttgctttggtcagaccccctggactgccaa
cacacaacagaccacaggaaggttactcagagggcagagccccaacaggagatcagggca
gagcatggagaaatccagggctcctggggcacctgggggccgtggtcaacctgctcccgt
acctgtggaagaggggtacaagagcagagcaggccctgcctgcctgcttatactccatcc
caataccactccagaagagctggcgttctcccccagcaaccaggccgtgtcatttcagcc
ctgcggccaacagctcccctgccccgcgacacaggcaggtcctccaacagcagcagtcgt
ggagagccgaggcaggagaaggagactcggtctggtggacgcaggagggtcactcacatc
atcccggggaggtacagctacgggagagctccttacgttgctccattgcagacggataca
ggccagggctctgggaaggctcgcagacagagacactctgctgcggctgatacccatcac
caaaccactagaggccatggtggccacaggtcaaacagcatggacctctccaacatcgtc
catcactacagcagaccctacatgcagcccagggcacagcagcccaaaaatagccaagtc
tgggcccccctctaccagcctggttcggctaaccaggctcaggtccagcaggagctacaa
tcaggcagccagacatctggaccccagcagcaccaagagagaccctacaaccccctgcct
acttccttctgcataggggagcatgctcgctacagcatctgcaacaataatgcttgtcct
ccatccagcagacacatcagggctgttcagtgttcatcatacaacaaccaacctttcatg
ggcagactatatgagtgggaacctttcaatgaggttcccggggatcagcattgtgaactg
aactgccgggccatagggttcaggttctacgtgcggcagtcagacagagtgatcgatggg
acgccatgtgggcagaatgaaacttctctctgtgtggcgggaaagtgtgcgagtctaggc
tgcgatgagtatctgggatcaggaaaggtgatggacaagtgcggtgtgtgtggaggcgac
aacacaacctgcaggctggtctctggagtgtttaaacacagtttgtccaaggtcggctac
cacaagataatggagatcccagagggagccaccaagatcaacgtcacagaaatggtgaag
agcagaaactacctagcgctccggagccgatcagggcgatccatcattaatggaaactgg
gccattgaccgaccagggaagtatgagggaggggggaccatgttcacctaccgccgaccc
aacgaaatccgtagcacagctggggagtcctttgttgctgaagggcccaccaatgagatc
ctggacgtttatatgatcttccagcagccaaaccctggtgttcactatgagtacattctc
ccctctgagaaaccagttgaccctcagcaaccaaaccacagaccagatgggaacgacaac
caggttcccgtcgtgcagccacccagacgcccgagagagtacaactggaaactggctggt
gctacagagtgcagcgcctcctgtggtaaaggattcagatactccatctttcactgtgtc
tcccggctgaaccatgtccaggtatcagatgctttgtgtgacagcagcagcagaccgact
ccgcaggaagaggcctgcaacctgcagccctgcccagccttctgggatattggagagtgg
tcagaatgcagtaagacctgcggcctgggcatgcagcaccggcaggtcctgtgtcgccag
atttacgccaaccgcaccctcaatgtccacacgagccgctgtcgccacttggagcggccc
gaaatcgccagtacctgccagctgaagatctgcagtgagtggcagatccgctccgagtgg
accgcttgctcggtgccgtgtgggctgggtcagaggtcacgagaggtacgctgtgtcagc
aacgtgggcgactttgttcctgatgaggagtgcaacatgaatctgcggcccatcgatgta
gagaactgtgacatgggaacctgtgccaagagctggttctacaccgagtggggcaatagg
tgctcagctgaatgtgggatgggtgtacgaacccggggaatcctctgcctgaccaaccac
atcagcagccttcctctggagggctgtggcagcgagcagcccgcagactctcaggtctgc
aacaacggcccctgtgagaatcgcatcgagtggttcacaggcccctggagccagtgctct
gcagagtgtggcgcaggcagccagcagaggtcagtggtgtgcctgatgaagtcagatgaa
ggattcaccatcatgccactgtatgagtgctcctccctggagcggcccctcagccagcag
agctgcaacctcaaggcctgtggagcaaagtggtaccacactgactggagtgtgtgttca
aaaacatgtgggggaggtttccgtgtgcgggaggtgcgctgcctgtctgacgacatgcag
tccagcgagggatgcgaagagcagttgagaccagcaaagaaggaggactgcaacccagag
ccctgcatacctcacatagatgagaactgcagagacaaatactttaactgcaatgtggtg
gtccaggctcgcctctgcgtgtacgattactacaagatgacgtgctgtgcttcgtgttca
caagtggcccacagacagtcgattcatcggggccgcagctag
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