Siniperca chuatsi (mandarin fish): 122865457
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Entry
122865457 CDS
T08948
Symbol
myo5b
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb
KO
K10357
myosin V
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122865457 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122865457 (myo5b)
04131 Membrane trafficking [BR:
schu04131
]
122865457 (myo5b)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122865457 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122865457 (myo5b)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122865457 (myo5b)
mRNA cycle factors
P-body specific factors
122865457 (myo5b)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Myosins
122865457 (myo5b)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122865457 (myo5b)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122865457 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
Ac76
nSTAND3
AAA_16
INTS5_N
Motif
Other DBs
NCBI-GeneID:
122865457
NCBI-ProteinID:
XP_044029839
LinkDB
All DBs
Position
LG18:complement(613821..658710)
Genome browser
AA seq
1848 aa
AA seq
DB search
MTSDYYPYSKYTRVWIPDPEDVWKAAEIVRDYKEGDPVLHLQLEDETPLEYPVGPKSNAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYDQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLGLTSAEDFTFTSLGENIFIEGV
NDAEDFKKTREAFTLLGIKDSSQSSIFKVVASILHLGNIEICSERDGESCHIARDDLHLQ
HFCRLLGVELQQMEHWLCHRKLVTASETYVKNMSSKQATNARDALAKHIYAXMFDWIVEH
INKALHTTSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQNSSSAHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFNEKEDVA
SSKSSRVNVRAARSTPKAPNKEHRKTVGHQFRRSLQLLMETLNATTPHYVRCIKPNDAKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLLKKSDMMSADKKLVC
KNLLETLIKDADMFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRGWLQRVRYR
KIRRSAITLQRYGRGYLARRYADVLRRTRAALVCQKQYRMVRERRAYRRVRQAVVTIQAF
ARGMFTRKVYWEFLLHHKAMIIQKSVRGWLQRRKFRRARDAAITIQCAFRRTRAKRQLQQ
LKIEARSAEHLKKLNSGMENKIVQLQRKMDDQSKEYRTQNEQLLLVNTSLGSEVSKLQKQ
LEQVRSQQGEGGQLTSLQEELERLREELQEASAQRKRLEEEHSSEKEGLQQRVEELEREN
SLLKSEKEEMNQRILQHSKSIEEDDSSVSQRTSSLQTELDEERQRYQNLLKEFSRLEQRY
DNLKEEVSLAKFHPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDSIQLVEEVGVEKAAM
DISLFMKLQKRVRELEQERKRLQANLDKMEELAKHKGSESRSPTSEQETADLAYNNLKRQ
ELESENKKLKNDLNELRKTVAERASQNNSSSELQDSYNLLLSQLKAANEELDARKEEVLI
LRTQILSTAQLREKNDHIQESNNVPELSNSKEPMDKEEALKAYHGLCESKNTQQDWCYLN
EDGELGLAYQGLKQVARLLEAQLQSQSRQHKDELEALHTQIELLKDDIEKKQEILSYTAS
LSPEAQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEVSQVDA
AQTSRSRPELSRQVTVQRKEKDFEGMLEYYKEDEALLLKTLIADIRPSTVSATVPCLPAY
ILFMCIRHADYINDDQKVESLLTSTINAIKKVLKKNNEDFEMTSFWLANTSRLLHCLKQY
SGDEVFMTQNSAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLE
SESIPSLAGVKPMGYRNRSSSMDTDAGGPSSYTLEALIRQLGQFHSIMRDHGLDPEIVGQ
VVRQLFHCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWLRGNNLYQSKAAATLEPI
IQAAQLLQVKKKTSQDAEAICSLCSALSTQQIVKILNLYTPLNEFEERVTVSFIRNIQNR
LQGSNDPPQLLVDTKQTFPVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgattattacccttattccaagtacacccgggtctggatccccgaccccgag
gatgtgtggaaggctgcggagatcgtcagagactacaaggaaggagacccggtccttcac
ctccaactggaggacgagacgcctctggagtatcctgtgggtccaaagagcaatgctctt
cctttcctgcgtaaccccgacatcctggtcggggagaatgacctcactgctctcagttac
ctgcatgaacctgcagtcctgcacaacctcaaagtccgcttcctggagtccaaccacatc
tacacgtactgcgggattgtgctggtggccatcaacccgtatgaccagctgcagatctac
ggagaggaggtcatcaccgcctacagcgggcagaacatgggggacatggaccctcatata
tttgctgtggctgaagaggcgtacaagcagatggccagagatgagaggaatcagtccatc
atagtgagcggagaatccggagctggaaagacggtttctgcaaagtacgccatgcgtttc
ttcgccacagtgggcggctcagctaatgacacgaatgtggaggagaaagtgctcgcctcc
agtcccatcatggaggctattggaaatgcaaaaaccactcgaaacgacaacagcagtcgg
tttggaaagtacattcagatcggtttcagccggcgttaccacatcatcggtgccaacatg
cgaacatacctgctggagaagtctcgcgttgtttttcaggctgaggatgagaggaattat
cacatattctaccagctgtgtgcctcggccagtttaccagagttcaaagacctcggcctc
accagcgcagaagatttcaccttcacgtctttaggggagaacatcttcatcgagggagtg
aacgatgctgaagactttaaaaagaccagagaggccttcacactgctgggtataaaggac
agcagtcagagcagcattttcaaagttgttgcctccatccttcatctgggcaacatcgag
atctgctccgagcgagacggagagtcctgtcacatcgcaagggacgacctccacctgcaa
cacttctgcaggctgctgggggtggagctgcagcagatggagcactggctctgtcacagg
aagttggtcactgcgtccgagacgtacgtgaagaacatgtccagcaaacaggcgaccaac
gcccgcgatgcgctcgccaaacacatctacgccngcatgtttgactggatcgtggagcac
attaacaaggccctgcacaccacctccaaacagcactccttcatcggagtcctggacatc
tacgggtttgagacgtttgaggtgaacagttttgagcagttctgcatcaactacgccaac
gagaaacttcagcagcagttcaactctcatgtgtttaagttggagcaggaggagtacatg
aaggagcagatcccctggactctgatagacttctatgataaccagccctgcatcgacctg
atcgaggctcgactcggcatcctggacctgctggatgaagagtgtaaagtgccaaaggga
acggatcagaactgggcccagaagctctacaaacagaactccagcagcgctcactttcag
aagcctcgcatgtccaacacctccttcatcatcatacacttcgccgataaggtggaatat
cagtgtgaaggctttctggagaagaacagagacaccgtctacgaggagcagatcaacatc
ctgaaagccagtcagtttcagctggtagcagatctgttcaacgagaaagaagatgtcgcc
tcctccaagtcctccagagtgaacgtccgagcagcgaggtcgactcccaaagctcccaac
aaggagcacaggaagaccgtgggccatcagttccgcaggtctcttcagcttctcatggag
actctgaacgctacgactcctcattatgttcgctgcatcaaacccaacgatgccaaagag
gccttctcgttcgactcgaggcgagcggtgcagcagctccgagcctgtggagttctggag
acgatccggatcagtgcagccggatacccgtccaggtggacgtacccagatttcttcagc
aggtatcgcgtgttgctgaagaagtccgacatgatgtcagcagacaagaagctggtgtgt
aaaaacctgctggagactctgatcaaggatgcggacatgttccagttcggaaagacaaag
atcttcttccgggcgggtcaggtagcgtacctggagaagctcagggcggacaagttccgc
tcggcctgtatcaagatccagaagacggttcgaggctggctgcagagagttcgataccgc
aagatccgcaggtctgccatcacgctgcagagatacggccgaggatacctggcccgcaga
tatgccgacgtcctgcgtcggactcgggctgccctcgtctgtcagaagcagtatcgtatg
gtgagagagcgacgggcctatcggagggtgagacaggctgtcgtcaccatccaggccttc
gccagagggatgttcacccgcaaggtttactgggagttcctcctgcaccacaaggccatg
atcatccagaagagcgtccgcggctggctgcagaggaggaagttcagacgagcgcgcgac
gccgccatcaccatccagtgtgcgttcagacgcacgcgcgctaaacggcagctgcagcag
ctgaagatcgaagcgcgctccgctgaacatctgaagaagctcaacagcggcatggagaac
aagatcgtccagctgcagaggaagatggacgatcagtccaaagagtacaggactcagaat
gagcagctgctgctggtgaacaccagcctgggctcggaggtgagcaagctgcagaagcag
ctggagcaggtccggagtcagcagggtgaaggaggtcagctgacgtctctgcaggaggag
ctggagaggctgagagaggagctgcaggaggcgtcggcccagaggaagaggctggaggag
gagcacagcagcgagaaagaggggctccaacagagggtggaggagctggagagagaaaac
tctctgctgaagagtgagaaggaagagatgaaccagaggattctgcagcactcaaagagc
attgaagaggatgacagcagtgtgtcccagaggacgtcgtctctgcagactgagctggat
gaagagaggcagcgctaccagaatctgctcaaagagttttccagactggagcagagatac
gacaacctgaaggaggaggtgtccctggccaagttccaccccggccacaggaggaacccg
tccaatcagagcagcctggagtcggactctaactacccatccatctccacctcagaggtc
ggagacactgaggactccattcagctggtggaggaggtgggagtggagaaggctgcgatg
gacatcagtctgttcatgaagctgcagaagagagtcagagagctggagcaggagaggaag
aggctgcaggccaacttggacaagatggaggagctcgccaagcacaagggctctgagtcg
aggagtcccacctctgagcaggagacggcagatctggcctacaacaacctcaagagacag
gagctggagtcagagaacaagaaactgaagaatgatctgaacgagctgaggaagaccgtc
gctgagcgtgcatctcagaacaattcctccagtgaactgcaggacagctacaacctgctg
ctcagtcagcttaaagcagccaatgaggagctggatgcccgcaaggaggaagtcctaatt
ctgaggactcagatactcagcactgcccagctacgggagaagaacgatcatattcaggaa
agtaataatgttcctgaactgagcaacagcaaagagcccatggacaaagaggaggctctc
aaagcttatcacggactgtgtgagtccaaaaatacgcaacaggactggtgttatttgaat
gaagatggagagctgggtttggcttaccagggcctaaaacaagtggccaggctgctggag
gcccagctgcagtctcagtccaggcagcacaaagacgaactggaagctcttcacactcag
atcgagctgctgaaagacgacatcgagaagaagcaggagatcctcagctacaccgcgtcc
ctgtcgccggaggctcaggtggagtacagcgtccagcaggagatcacgcggctcaccaac
gacaacctggacctcaaggagctggtggagaaactggagaagaacgagaggaagctgaag
aagcagctcaggatctacatgaagaaagtccaggagttagaagtttcgcaggtggatgca
gcccagaccagcaggtccagacctgaactgagccgccaggtgaccgtccagaggaaagag
aaggacttcgaggggatgttggagtactacaaggaggacgaggccctgctgctcaaaact
ctgattgctgacatcaggcccagcacagtgtctgctacggttccctgtctgcccgcatat
atcctcttcatgtgcatccgccacgctgactacatcaacgacgaccagaaggtggagtct
ctgctcacctccaccatcaacgccatcaagaaggtcctcaagaaaaacaacgaggacttt
gagatgacgtccttctggctggccaacaccagccgcctgctgcactgcctgaagcagtac
agcggagatgaggtgtttatgacgcagaactcggccaaacagaacgaacactgtctgaag
aactttgacctggcagagtaccggcaggtgctgagtgacctctccatccagatctaccag
cagctcattaaggtggcagaaggcatcatacagcccatgatcgtgtcggccatgttggag
agcgagagcatccccagcctggcgggggtcaagccgatgggctacaggaaccgttcatcc
agcatggacacggacgccggcggccccagcagctacactctggaggccctgatcagacag
ctgggacagtttcacagcatcatgcgggaccacggtctggaccccgagatcgtgggtcag
gtggtccgacagctcttccactgcatcaacgccgtcaccctcaacaacctgctgctgcgc
aaagacgtgtgctcctggagcaccggcatgcagctcaggtacaacaccagccagatggag
gagtggctgagaggaaacaacttgtaccagagtaaagccgcggccacgctggagcccatc
atccaggccgctcagctgctgcaggtcaagaagaagacgagccaggacgccgaggccatc
tgctcgctctgcagcgccctgtccacgcagcagatcgtgaaaatcctgaacctctacacg
ccgctgaacgagtttgaagaacgagtgactgtgtccttcattagaaacatccagaatcgt
ctccaggggagcaacgatcctcctcagcttctggtggacaccaagcaaacgttccccgtc
ctcttcccgtacaccccctctgctctcagcctggagacgctgcacatccccgcctccctc
ggcctcgacttcctcatcagagtctga
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integrated database retrieval system
