Siniperca chuatsi (mandarin fish): 122865494
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Entry
122865494 CDS
T08948
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122865494
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122865494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
dsrm
DZF_N
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
122865494
NCBI-ProteinID:
XP_044029923
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All DBs
Position
LG18:complement(14908672..14991003)
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AA seq
733 aa
AA seq
DB search
MRSFRSFSNDDRHVMAKHSTIYPSSQELEAVQTLVSTVECALKHVSDWLDQSSSDINSQV
DSQPADSTEEDDPGDEPSEKTEDSIDSYREPSSGGVLCGVMRIGLVAKGLLIKGDMDLEL
VLICRDKPTQTLLDTVCHNLPTQIEKLTEEKYEVTSSLPEAAILVQTTTEPKLTLTITLT
SPAMREDEEEEEEEEEELENGEEGEEEEGVEVEEEEEEQEKNNGQVLGAAAQRVDAVEEE
GEVLDRHRCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHPAWEPLKGWPLELI
CEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKEPTNTLANMTDQQAEAI
TYSAQRALRLMAFGQIYKVLEMEPLPSNKPSQKYPWSDKEGLGLKRPYDDGPMDDKDLIK
KMKRNLRKVLDSKAIDSNQPMNALMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDLDGTI
YEASGSSKKTAKLHVAVKVLQAMGYPTGFDTDLDPMSSDEKSDGEGKSETSSHTSNNPTH
STDNSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRFVMEVEVDGQ
KFRGAGPNKKVAKASAALAALEKLFSGPNAAANKKKKILPQTKGALAVAAAASAVAAQVA
RGRGRAALARGAFVSAAAPGYVTPGFGTPYGYSPAAAAAPAYGGLFIDNPFYQPRTIAPF
IIHLGPQDLFSDF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttccgctccttcagtaacgatgaccgccacgtcatggcgaaacactccacc
atctacccctcctctcaggagctggaagccgttcagacgctggtgtccactgtcgagtgc
gccctcaaacacgtctctgattggctggatcagagcagcagcgacatcaacagccaggtt
gacagccaaccagcagacagcacagaggaggatgatcctggagatgagcccagtgagaaa
actgaggattccattgacagctacagagagcccagcagtggtggcgtgctgtgtggagtg
atgaggatcggcctggtggccaaaggccttctgatcaaaggcgacatggacctggagctc
gtgctgatatgtagagacaaacccacacagacactgctggacactgtctgtcacaattta
cccacacagatagagaagctgacagaagagaaatatgaggtcacaagctccttgcccgag
gcagccatcttggtacaaactacaacagagcccaaactcacactgacgattaccctcacc
tcaccggccatgagagaagatgaggaagaagaggaggaggaagaggaggagttggagaat
ggggaggaaggagaagaggaggagggcgtggaagtggaggaagaagaggaggagcaggag
aagaacaatgggcaagtgttgggtgctgctgcgcagagagtggatgctgtggaggaggag
ggggaggtgctggatagacacagatgtctgttggccctggcagcgctgagacacgccaag
tggttccaggctcgagtgaacgggctcaagtcctgcgttattgttctcaggatacttaga
gacatgtgcaatagacaccccgcctgggaacctctcaagggatggcccttagagcttatc
tgcgagaaggctattgccacctgcaacagacctctcggggctggagaagccctgcgtcga
gtcatggagtgtctggcctcaggcatactgctaccaggtggtccaggtttacacgaccca
tgtgagaaagagccaacaaacacactagccaacatgaccgaccagcaggctgaggccatt
acctacagcgcgcagcgtgctctcagactcatggcattcggacagatctacaaggtgttg
gagatggagcctcttccctcaaataaaccatcacagaaatacccttggtctgataaagaa
ggcttaggtctgaagaggccatacgatgatggaccgatggatgacaaggatctcatcaag
aagatgaagaggaatctgaggaaagtcctagatagtaaagccatagactccaaccagcca
atgaacgccctgatgcggttgaaccagatccggccaggcctgcagtatcgcttgctgtcc
cagtcgggcccagttcacgctccggtcttcaccatgtctgtggatctggatggaaccatt
tacgaagcatctggctcctccaagaagaccgcaaagctccacgtcgcagtcaaggttctc
caggcgatgggatacccaacaggttttgatacagacctggaccccatgagttcagacgag
aagtcagacggtgaagggaagagcgagacgtcatcacacactagcaataacccaacacac
tccacggacaattccaacacactggaggtgcgaactcagggtcccatactaacagcgagt
gggaagaaccccgtcatggagctaaacgaaaagagacgaggcctcaaatatgaactcatc
tctgaaagtggaggcagccacgacaaacgctttgttatggaggtggaggtcgatgggcag
aagtttcgtggggcaggccccaacaaaaaagtagcaaaggccagtgctgctctagcagct
ctggaaaaactcttctctggtcccaacgcagctgcaaacaagaaaaagaagatactgcct
cagactaaaggagccctggccgtggcagcagcagcctcagcagtagcagctcaggtagcc
agaggaagaggaagagcagccctcgcaagaggagccttcgtcagcgcagccgcacctgga
tatgtcacaccaggctttgggacaccgtatggctacagcccagctgcagcagctgctcct
gcatacggtggtcttttcattgacaatcccttctaccagcctcggaccatcgcacctttt
atcattcatctgggtccccaggatctcttctctgacttctag
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