Siniperca chuatsi (mandarin fish): 122865553
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Entry
122865553 CDS
T08948
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
schu03012
]
122865553 (dhx29)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122865553 (dhx29)
Translation factors [BR:
schu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122865553 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
Helicase_C
OB_NTP_bind
DEAD
HA2_C
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
AAA_16
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122865553
NCBI-ProteinID:
XP_044030084
LinkDB
All DBs
Position
LG18:complement(8793992..8804744)
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AA seq
1384 aa
AA seq
DB search
MGGKKKKSAAQAATPVAPAGAAGRTAAAAAGNSVAEEPKKQPASNKLAKPSKENKSKAPK
TYSLANTAQVDTGGVSDKSILKVSIQADLEKKIIKLINDFREENGDKGPISGRLTNKKLL
DLYTALEKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDDELPEGFTQQMQEESQK
SRPKFQPPALQKPATPSPKAPNNTCKETTKATEKDEAMSMKDWILRYAEQSSDDDDEEEE
EGGKKTARNPELDVKFDPNDRYLVLTAQLYDTKEMAAVAKTKGDKAGQRMAQDRIRIIQQ
EMKQLESHPMFNPAIKVVDVPQKEKKILPARDDKEDLSFSLFEQAEKAPPAEKVVKKNEP
KDIRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPAPAFHKIAAGRYWKCKVRVQRPDDAL
EVCPTILTEDSMQAQHLAATLALYTLVKGQSVHQLLPPTYRDVWLEWRDSEQQQQEESRT
AANKPRDQFISRLLTRLKQQQNQNRVQESGSQDQLGLGRAGDEEPEESWENLAGLDIGEG
GEEVDDMSEERGGRKERAGALEASAELLKKLKKSSLALKLQAEREQLPVFQHRHRVLEAL
QRHPVVVVAGETGSGKSTQIPQFLLEELLIGGKAAQPCNIVVTQPRRISAMSLACRVSQE
LGCEDGPGSKSSLCGYQIRMENQSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVH
ERSVQSDFLLTILKDVVMRRSDLQLILMSATVDCGKFSNYFNRCPVITIPGRTFPVEVSH
LEDIVEQTGYILEKDSEYCQKILEEEEEVSISVTQKGGKTLQHQEVILRDSSSGWDLGPD
LDHFSSRTRQVLQYMNPNKINMDLLVDLIDYLDKSPQFAEVDGAVLVFLPGLAHIQQLYD
LLSSDKRFRDKNRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVF
VIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRNGFCFRLYPKYRFDSFMD
YSIPEILRVPLEELCLHIMKCQYGSPEDFLSRALDPPLPQSVSNAVNLLRKIGACHPNNH
LLTPLGQHLASLPVNVKIGKMLIYGAILGCLEPIATIAAAITEKSPFSTPMNRKEEANLA
KAALALANSDHLTIYNAYLGWKNSQTEGQRAEMSYCRKHFLNRTALITIQDVKHELMRMM
EQAGFWSSRSSSSHSNQQAAALSKQQITVLNAVLTAGLYDSVARVLCTPSVDVLERVVCT
VETPQGKAQVHPSSVNRNLQTHGWLLYQEKVKYAKIYLRDTTLIPPFPMLLFGGDIDIQH
RERLITLDGWIHFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMNLEGERTIQMILDLIKS
EHTV
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaagaagaagaaatcggcggcgcaagcggctactccggtagccccggcagga
gcagcgggtaggactgctgccgctgcagcggggaacagcgtggcggaggagccgaagaaa
cagcctgccagcaacaagctggctaaaccatccaaagagaacaagtcaaaagctccaaag
acctacagtcttgccaacaccgcccaggttgacacaggtggagtctcggacaagtcgatt
cttaaagtttctatccaagctgacctggagaagaagatcatcaagctgatcaatgacttc
agagaggagaatggggacaaagggcccatatcaggcagacttacgaacaagaagttgctg
gacctgtacaccgctctggagaagttcaactttaagagagaacatattgaggaggcgatg
aagagtagtgtgctgtacggaggggatctccactctgctctcgactggctctgcctcaac
ctcaaagatgatgagctgccagaaggttttacccagcagatgcaggaggagagtcagaag
agcaggccaaagttccagcctcctgctctgcagaaacctgcaaccccaagccccaaagca
cccaacaacacctgcaaagagaccaccaaggccacagagaaggatgaagctatgagcatg
aaggattggatcttaaggtacgcagagcagagcagtgatgatgatgatgaggaggaagag
gaaggagggaagaagactgcacgcaatcctgaactggatgtaaagtttgatccaaatgac
aggtatttggtccttactgctcaactgtatgacacaaaagaaatggcagctgttgccaag
acaaaaggagacaaggcgggtcagaggatggcacaggacaggatacgcatcatacagcaa
gaaatgaagcagctggagtcccaccccatgttcaatccagctataaaagtggtagacgtg
cctcaaaaggaaaagaaaatacttcctgcccgtgatgacaaagaggacctcagcttcagc
ttatttgaacaagctgaaaaggcccctcctgcagagaaagttgtgaaaaagaacgagcca
aaggacattcgcaattttgactacacagctcgcagctggacaggaaagtctcccaaacag
ttcctcattgactgggtccgaaaaaacctgcccaagagtccagcaccggcttttcacaag
attgctgctggtagatactggaaatgcaaggtgcgtgttcagaggccagatgatgctctt
gaagtttgcccaaccatcctgactgaggacagcatgcaggctcaacatctggcagccaca
ctggcactctacaccctggttaaaggacagtcagtgcaccagctccttcctccaacctac
agagatgtgtggttggagtggagagacagcgagcagcagcaacaggaagagagccgcact
gctgccaacaaacctcgagaccagttcatctcccgccttttgaccagactcaaacagcag
cagaaccagaaccgagtgcaggaatctggatcccaagaccagctggggctgggcagggct
ggggatgaagagcctgaagagtcctgggagaacctggctggtcttgatattggggaggga
ggagaagaagtggatgacatgagtgaggaaagaggagggaggaaggagcgagcgggagca
cttgaggcgtccgcagagctcttaaaaaagctgaagaagtcctcactggccctcaaactg
caggcagagcgagagcagcttcctgtcttccaacaccggcatcgggtcctggaggctctg
cagcgccaccctgtggtggtggtggccggtgagacgggcagcggaaagagtactcagatt
cctcagttcctcttggaggagctgttaataggaggcaaagcagcgcagccctgcaacatc
gtggtgacccagccccgcaggatctctgccatgagcctggcctgcagagtcagccaggag
cttggctgcgaggatggaccgggatcgaagtcgtcgttgtgtggataccagattcggatg
gagaatcagtctggggagtggacccgcctgctgtactgtactactggagttctgcttagg
aaactacagcatgacagacacctcagctccctgacacacatcatcgtagacgaggtccat
gagcgcagtgtccagtcggacttcctgttaaccatcctgaaagatgttgttatgaggaga
tcagacctgcagctgatccttatgagcgccacagtggactgtggcaagttctccaactac
ttcaaccgctgcccagtgatcaccatccccggcaggactttcccagtggaggtatcccac
ttagaagacatagtggaacagacggggtacatcctggagaaggactcggagtactgccag
aaaatccttgaagaagaagaggaagttagcatttctgtcacacaaaaaggtggcaagacg
ttacagcaccaggaggtgatactgagggactcctcctccggctgggacctgggtccagat
cttgaccacttcagcagcaggactcggcaggtgctgcagtacatgaaccctaataagatc
aacatggacttactggttgatctcatcgactacctggacaaatcgccacaatttgcggag
gtggatggtgccgttctcgtgttcctcccaggtctggctcacatccagcagctctatgac
ctgctctcctcagacaagaggttcagggacaaaaacaggtacaggattgttgctctccac
tcgactctctcatcaaaggaccaggctgctgcctttacagtgccacctgctggagttaga
aagattgtcttgtcgactaacattgctgagacaggtgtgactattcctgacgtcgtgttt
gtcatcgacactggaaagactaaagaaaataagtaccatgagagcagccagatgagttct
ttggtggaaacttttgtttccaaagccagcgccctccagaggcaggggagagcaggacgt
gtccgaaacggcttctgctttagactctaccccaagtacaggtttgactccttcatggat
tactccattccagagatactacgagtcccactggaggagctctgccttcatattatgaaa
tgtcagtacggctccccggaggactttctgagccgggccctggatcctcctctgccccag
tcggtcagtaacgccgtcaacctgctgaggaagatcggtgcgtgtcatcccaacaatcat
ctcctcacccctctgggacaacacctggcgagtctgcctgtcaatgtgaagattggcaag
atgctcatctatggagccatcctcggctgcctggagcccatagcaaccattgcagcagcc
atcacggagaagtctcccttctccacaccgatgaataggaaggaagaagccaacctggcc
aaagctgccctggcattagccaactctgatcaccttacgatatacaatgcatatctgggg
tggaagaattcacaaactgagggacagagagcagaaatgtcctactgtaggaaacacttc
ctcaatcgtacagctctcattacaatacaggatgtgaagcacgagctaatgaggatgatg
gagcaggcaggtttctggtcgtctcgctcctcctcttctcactccaaccagcaggcggcg
gcgctgtccaagcagcagatcaccgtcctgaacgcagtgctgacagcggggctctacgac
agcgtggcccgggtcttgtgcaccccctctgtggatgtgctggagcgagtcgtgtgcaca
gtggagacgccccagggcaaggctcaggtccacccttcatccgttaaccgcaacctgcag
acacacggctggcttctgtaccaggagaaggtgaagtacgctaagatctacctacgagac
accactctgatacctccgttccccatgctgctgttcggaggtgacatcgatattcagcac
agagaaaggctcatcacactagacgggtggatccacttccaggctcctgtacggattggt
gtgatcttcaaacacctgaggaaactaatggactctttgcttgaaaagaagctggagaac
cccaggatgaatctggaaggtgagaggaccatccagatgattctggatctgatcaaatca
gagcatactgtgtga
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integrated database retrieval system
