Siniperca chuatsi (mandarin fish): 122865554 Help Entry 122865554         CDS       T08948                                  Symbol itga1 Name (RefSeq) integrin alpha-1 isoform X1   KO K06480   integrin alpha 1 Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04510   Focal adhesion schu04512   ECM-receptor interaction schu04810   Regulation of actin cytoskeleton schu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:schu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122865554 (itga1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122865554 (itga1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122865554 (itga1)    04810 Regulation of actin cytoskeleton     122865554 (itga1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:schu04147]     122865554 (itga1)    04515 Cell adhesion molecules [BR:schu04515]     122865554 (itga1)    04090 CD molecules [BR:schu04090]     122865554 (itga1) Exosome [BR:schu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    122865554 (itga1) Cell adhesion molecules [BR:schu04515]  Integrins   Integrin alpha subunits    122865554 (itga1) CD molecules [BR:schu04090]  Proteins   122865554 (itga1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 Integrin_A_Ig_1 VWA_2 FG-GAP_3 MFS_Mycoplasma Motif Other DBs NCBI-GeneID:  122865554 NCBI-ProteinID:  XP_044030085 LinkDB All DBs Position LG18:complement(8695910..8769239) Genome browser AA seq 1186 aa AA seqDB search MLGISQHVSLTTVAVVVLLACVLSFNVDQKNALSFSGPLEDMFGYTVQQFENSEGKWVLI GSPLSGQPAKRTGDVYKCPVGKGDNTCVKLELPKNTTVPNLHEVKENMTMGTTLVTNPDG GFLACGPQYGYMCGEQQYISGVCANVSSSFQILNSVAPAVQECAKELDIVIVLDGSNSIY PWSSIIDFLRRFIEKIEIGPKLSQVGIVSYGETVTHRVNLSQFDNTPSLLKFVEGLPQQT GFKTMTFLGIDIARKEAFMPERGARPGVKKVMVIVTDGESHDFHNLDKVIGDCDNDDIER FGIAVLGDYNRQNKSAEEVQKFIKEIESISSKPLHEHFFNVSDEVALLTIVDALGSRIFA LEATTGNFTSSFEMEMSQAGFSAHTSKEGVLLGAVGAYDWNGTVVMHTAGGTIVPGKTQF YDPKTEAGYEGLAGYLGYDVQSASTPDGELYITGAPRYNHTGRVVIYRLNEKYNIIVSQI LKGEQIGSYFGSVLQTVDVDGDTYTDLLLVGAPMYMGTERDEQGQVYVYKLNQDGQFEHE FTLKPVNQSCCTAHSASCTNKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPFENDHRGA VYIYHGDKMSLKEKFVQHIAAGGDGEKVKFFGQSIHGVMDLNGDGITDVTIGGLGGASLF WSRDVAELHANMTFNPVKINLQQSQHQCEHGGRKSVCVTTEVCFAYSIKSDQQDSNSAAE IHYNLTLDALRAKARASFIASDDKSDRRITRSFTIKDRERKCVPDTFMMSARPDFRDPLM VSLEFGLADENQGPVLDENLPRSINKTIPLVDCGRDEKCIADLSLKAEPSVKRMMIKANK DKIDVNIIVRNSKDNAYNTKVILSFTPNINYVKVEPEKVCTLNHTKVECAVGYPFLGSNV EEKFNVKFEINPKHVQAVIQINVTATSDSEELASTLHDNTVQISIPVKYEAGLIFSVRPV DEHVVVKEGEQYSTVFNDTRIIGEEVNISYTVEKSGDMVTPPLNLTVTYPHLSPRQNNLL YLTHVTTSPQVKCDAARWINPDKINPGVIKPSPNKETLSVFLLSCENHYCASFSCSIPEA TISQVNVTFRVWKPTFIKGEFSSLYMLVNATLGITNTDLFGLNSSDRTRSVKIQVSKETL GGIPIWIIIISILIGLLILALVIFALWKMGFFKRKSRDYSKEEMMD NT seq 3561 nt NT seq  +upstreamnt  +downstreamnt atgctcgggataagtcaacatgtctctttgacaacagtggcagttgttgtgctgctggcg tgcgtgttgtccttcaatgtggaccagaaaaatgccttgtcattcagcggtccactggag gacatgttcggctacactgtccagcagtttgagaacagcgaggggaaatgggttctgatt ggatcgccgctgtcaggccagccagctaaacggacaggagacgtctacaagtgtcctgtg gggaagggggacaacacatgtgttaaactggagctgcctaaaaacacaacagttcccaac ttacatgaagtcaaggagaacatgaccatgggaaccacactggtgaccaatcccgacgga ggatttctggcctgtggtcctcagtatggctacatgtgcggagagcagcagtacatctca ggagtttgtgcgaatgtcagctcttccttccagatcctcaactcggtggcaccggccgtg caagagtgtgcgaaggagctggacattgtgatagttctggatggatctaacagtatctac ccctggtccagtatcattgattttctgcgacgtttcatcgagaagatagagatcggacct aaactctcacaggtgggcatagtgtcctatggtgaaactgtgactcaccgtgtcaacctg agccagtttgacaacactccttctttgctgaagttcgtcgaagggcttcctcagcaaact ggcttcaagaccatgactttcctgggcattgatattgccaggaaggaggccttcatgcca gagcgtggtgcacgacctggggtgaagaaagtcatggtgattgtgactgacggagagtca catgacttccataatctagacaaggtcataggagactgtgacaacgatgacatcgagagg tttggcattgctgttttgggagactacaatcgtcagaacaaaagtgcagaagaagtgcag aagtttatcaaggagattgagtccatctccagtaagccgctacacgaacacttcttcaac gtgtctgatgaggtggcattgttgaccattgtggatgctctgggaagcaggatttttgca ttggaagctacaactggcaatttcacctcctcctttgagatggagatgtcccaagctggg tttagtgcacatacttctaaagaaggtgtgttactgggagcagtgggagcgtatgactgg aacgggactgtggtaatgcatactgctggaggaacaatcgttccagggaagacccagttc tacgacccaaagactgaggctgggtacgaaggacttgctgggtacctcggctatgatgtt cagtcagcatccacccctgatggagaactgtacatcacaggtgcaccacggtacaaccac acaggccgggttgttatctatcgtctgaatgaaaagtacaacattattgtctcacagata ctgaaaggagaacagattggttcctacttcggcagcgtcctgcagactgtggatgtggat ggggatacctacacggatctcctcttggtcggagctccaatgtacatgggcacagaacga gatgagcagggacaagtctacgtctacaaacttaaccaggacggccagtttgagcacgag ttcactttaaagcctgtcaatcagtcctgttgtactgcccactcagccagctgcactaat aaaaatgagccatgtggtgcccggtttggtacagccattgcagcagtatcagatctcaat cttgacgggtttaatgatgtggcaatcggtgcaccttttgagaacgaccaccgaggggcc gtctacatctatcatggagataagatgtcactgaaagagaaatttgtacagcatattgct gcaggtggggatggtgaaaaggtgaaattctttggtcagtccatacatggagtcatggat ctaaatggagatggaatcactgatgttaccataggaggcctgggaggggcttcactattc tggtccagagatgtcgcagagctccatgccaacatgacttttaaccctgttaaaattaat ctgcagcagtctcagcatcagtgtgaacatggtggacgcaaatctgtgtgtgtgacaact gaggtgtgtttcgcctacagtatcaaatctgaccagcaggactcaaactctgctgcagag atccactacaatctgactctggatgctctgcgtgcaaaagccagggcttcatttattgcc tcggacgataaaagtgatcgtaggattaccaggagcttcaccatcaaagacagagagaga aaatgtgtgccagataccttcatgatgtcggcccggcctgacttccgagaccctctcatg gtgtctttggagtttggactagctgatgagaaccaaggccctgtcctggatgaaaacctt cccagatccatcaataagacaattcccttagtggactgtggcagagatgagaaatgcatt gctgacctctctctcaaagcagagcctagtgtaaaaagaatgatgatcaaagcaaacaaa gacaagattgatgtcaacatcatcgttagaaacagcaaagacaacgcatacaacactaaa gtcatcctcagcttcacaccgaacatcaactatgttaaagtagagccagagaaggtatgc actctaaatcacacaaaagtggagtgtgcggttggataccccttcttgggaagcaatgta gaggaaaaattcaatgtgaaatttgagataaatcccaaacatgttcaggcggtaattcag atcaatgtgacagctacaagtgacagtgaagagctggcttctaccctgcatgacaacaca gtgcaaatctccatccctgtgaagtatgaggctggactcatattctcagtgcggcctgtg gatgaacacgttgtagtaaaagagggtgaacagtattccactgtattcaatgacaccagg atcattggagaggaggtcaacatcagctacacggtggagaagtcaggtgatatggtgact ccgccccttaaccttacagtgacatatcctcatctgtctcctcggcagaacaacttactt tacctgacacatgtcaccaccagcccacaggtgaaatgtgacgcagcacgttggatcaac cctgacaaaattaacccgggcgttataaagcccagtccaaataaagaaacactcagtgtc ttcctactgagctgtgaaaaccactactgtgcatcatttagctgctccatccccgaggct acgatcagtcaggtcaacgtcacattcagagtgtggaaacctacgttcatcaagggcgag ttttccagtctgtacatgttggtgaatgccacactggggatcacaaacacagacctgttt ggactgaacagcagtgacaggaccagaagtgtgaagatccaggtttcaaaggagacctta gggggaatccctatttggatcatcatcatcagcatcctgataggactgctgatcttagca cttgtcatcttcgctctctggaagatgggcttcttcaagagaaaatccagggactactca aaggaggaaatgatggactga

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