Siniperca chuatsi (mandarin fish): 122865682
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Entry
122865682 CDS
T08948
Symbol
rapgef1b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122865682 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
122865682 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
122865682
NCBI-ProteinID:
XP_044030405
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Position
LG18:7976094..8015284
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AA seq
1221 aa
AA seq
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MGNINWRSQASSEDTDSSLQGDLDEDTDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQ
LQPEPAAKSTEKPANKKVSRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVL
EAILPLVQVEARIQHSSALSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTNVI
KAVLDGVKELVKLTIEKQEQPSPTTPNKPAPPATTAESSVSSEMPLIDREKEVSKKTAPA
APPAEAASDIPDEDVAPPKPPXPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQS
APSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMG
KLSKSDEQLSSMEQDSGQCSRNTSCETLDNTENYDPDYDFLHQDLSAGDNLPPIPVGGCL
SPLPESHSESSSPVPGQHPSHPRFSAPPPQQPPEYWTPQPNQTNPLQSSRISAPPALPQK
KRRSTQTSPFPDGGSRVLYERYPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVTQ
YIASENADVPASPPPLPEKKSRHILQYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQ
EVYGFNDSFSSTDSVHEPLQPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEA
GSGLGLSMSVSNSYLIGQASLTTPTSLDQVALTNATILDGSGGGPNGSLAGSMGSVAVCL
PSESSLTDSLHTSASECANDEGGEGEYVNLYSSSQANGELPLSLRETITADDVLQDPTPQ
MASTNSKEALDKERRQKSTESAGSDEEDVDELSLIDHKEIMNRITLKQENDDGPDVRAGS
GDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSK
NTFFVLVRVVDELCLVELTEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQKKLLR
YTNSLKPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKS
PNLTQFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSAL
DSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVH
LGNPDLIDGKVNFSKRWQQFNILDSMRRFQQVHYELKRNEDIVSFFNDFSDHLAEEALWE
LSLKIKPRNITRRKTDREEKT
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatataaactggaggagccaggcctcctcagaggacacagattcctctctacag
ggggatctagatgaggacacagactcgcaacggtcccatctgtcctctttcaccatgaaa
ctgatggacaagttccattctcccaagatcaagaggactccatccaagaagggcaagcaa
ctgcagcccgagccagcagccaagagtactgagaaacctgctaataagaaggttagtcgg
ctcgaggagcatgagaaggaggtggtcagtgccctgcgctactttaagacaattgtggac
aaaatggtcgtggagaagaaggtcctggagatgcttccaggctcggccagcaaagtgctt
gaagccatcctgcctctggttcaggtagaggcccggatacagcacagttcggcgctgtct
tcctgccataaccgtgtgtatcagagtctggccaaccttatccgttgggcagaccaggta
atgctggatggcatcgacttggaggacaaggaaaatgtggcatctgtcaccaatgtcatc
aaagcagtgctggatggagtaaaggaattggtgaagctgaccatagagaaacaggagcag
ccgtcacccaccacccctaacaaaccagcaccacctgcaaccacagcagagagcagcgtg
tcatcggagatgcccttgatagatcgggagaaggaggtctcgaagaagacggctccggca
gctcctcccgcagaggctgcctctgacataccagatgaggacgtagcccctcccaaaccc
cctnntcctgaagccaaaatggcagagctcagagcacagttgagtgctgacgctggccaa
aggagaccctctcagaaggagaaccctccaccagctcttccccctaagaagcgtcagtca
gccccttcgcctacacgggttgcagtggttgccccaatgagccgcggttccagcctgccc
tgcagcgtccacagacagcaacaggactatgagcaggagttccttcagaggcgtttctcc
ggggggagccagtcctatgggggcgactctccacgcctgtcaccatgcagcagcatgggg
aaacttagcaagtctgatgaacagctctcctccatggagcaagacagtggtcagtgctct
cgtaacaccagctgtgagacgcttgacaacacagagaattacgacccagattatgacttc
ctccaccaggacttgtcagctggggataacctgcccccaataccggtaggagggtgcctg
agccccctgcctgagtctcacagcgagtcttcttccccagtccctggtcagcatccctca
catccccgcttcagtgctcctccaccacagcagccaccagaatactggaccccgcaaccc
aatcaaaccaatcccttacagtcctcccgcatcagcgcgccccctgccctgccccagaag
aagagacgcagcacccaaacatcgccttttccggacggcgggtccagggtgctgtatgag
cgctacccctcccaatatgacaacttgtctgaagaggagctgcaccctacaccgccattc
ccccttttcacacccatctcacccatgccccagacaaatgggggtgtgtttgtcacccaa
tacatagccagcgagaatgcagatgtccccgccagcccaccaccactgccagaaaagaaa
agcagacacatcctccagtacatgcagtttgtagaagactactccgagccgcagccctct
gtgttctaccagatgccacagagcgagagcatctacgagcagcgcaacaagcgcttccag
gaggtctacggcttcaacgactccttcagcagcaccgactcagtccacgagccgctgcag
cctccagcattgcccccaaaacaaaggcaactggcctcccactcttcctccccctcttcc
tcctcctcctcttctctctcctgccacctccagccgtctgtagcggccatggaggaggca
ggctctgggctgggcctcagcatgtctgtttctaactcctacctgattggccaagcatcc
ttgaccacacccacgagcttggaccaggttgccttgaccaatgccaccattctggatggt
agcgggggtgggcccaacggttccctggctggctcaatgggctctgtggctgtctgtctt
ccttctgagtcttctctcactgactctctccacacctcagcgagcgagtgcgcaaatgac
gagggcggggagggggagtacgtcaacttgtactcgtccagccaggccaatggggagctg
cctctctccctcagagaaacaatcacagctgacgatgtacttcaagaccccacccctcag
atggcatccaccaacagcaaagaggctttggacaaggaaaggaggcagaagtcaacagag
tcggctggcagtgatgaggaagacgtggacgagctctccctcatagaccacaaggagata
atgaacaggataacactaaaacaagaaaatgatgatgggccagacgttcgtgctggatca
ggagatattctattagtccacgctacagaaacagaccgcaaagatcttgttttgtactgt
gaagcctttctgactacatataggacttttataaccccagaggacctcattaagaaacta
cactacagatacaccaggttctgccacagtccggacaccttcaagaagcgagtcagcaag
aacacattctttgtgctggttcgtgtggtggatgagctgtgcttggtggagctgacagag
gacatcttgaaacagctgatggacctggtgttcacgctcgtgtgcaatggcgagctcagc
ctcgcccgtgtgctccgcaagaacattctggataaggtggagcagaagaagctgctgcgc
tacacaaactccctcaagccgctcgctgcccgaggggtctctgcaaggcctggaactctc
catgactttcgcagtcacgagattgccgatcagctcactcttcttgatgctgagctcttc
tataaaattgagattcccgaggtgctgctttgggccaaggagcagaatgaggagaagagt
ccaaacctgactcagttcacagagcactttaacaacatgagctattgggtccgctctttg
ataatccagcaggagaaagcccaagacagagagaagctgcttctcaagttcatcaaaata
atgaagcacttaagaaagttgaataatttcaactcctacctggcgatattgtccgcccta
gactctgcccccatcaggagattggagtggcagaaacagacgtcggagggattggaggag
tattgcacgttgattgacagctcctcctccttcagagcatacagagctgctctggctgaa
gtggagccaccatgcatcccgtacctgggtctcattctccaggacttgactttcgtccac
ctggggaaccctgacctcattgacgggaaggtcaacttctccaaacgctggcagcagttc
aacatcctggacagcatgcggcgcttccagcaagtgcattacgagctgaagcgcaatgaa
gacatcgtctctttcttcaacgacttcagtgaccacctggcagaggaggctctgtgggag
ctgtcgctgaagatcaagcccaggaacatcaccaggcgcaagacggaccgcgaggagaag
acctag
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