Siniperca chuatsi (mandarin fish): 122865711
Help
Entry
122865711 CDS
T08948
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
schu00535
]
122865711
04091 Lectins [BR:
schu04091
]
122865711
Proteoglycans [BR:
schu00535
]
Cell surface proteoglycans
Others
122865711
Lectins [BR:
schu04091
]
C-Type lectins
Others
122865711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF4381
Motif
Other DBs
NCBI-GeneID:
122865711
NCBI-ProteinID:
XP_044030460
LinkDB
All DBs
Position
LG18:17319258..17341282
Genome browser
AA seq
2583 aa
AA seq
DB search
MGSFVTNLFLLLLIATGQVYGVSFYGDGYIHLRTVEASIQTLLHVRFRTSSQAGLLFLAA
GRRDFLLLELISGRLQVRLDMGSGERSLRSEKGIHLSDLAWHSIELTHDHHNVNMTVDRN
SHTRLRIPGPDLELSVEDGLFVGGAAGLNHPYLLNISAGFRGCVDEVVFNEHNLLSSLRP
YSGYKSVHEVSLGCSPQFSATEEDSVSFFSSKAFISLPPWEVPQEGVFECELHPSAREED
GMILYSSGNQGGFVAIEIRDGHLVATVGNGEGSKTELRSLTHVHSNHTWYPILLHLQPHS
VQLKVGEELIKANLNMELQVIQLKGPLFLGGLDEDARGEARRAGLMSAVPGGKLAGGGGS
FKGCLRKMRVNTQRTGLPHAAITKDITVGCKTGSRQAPDAVTTTSPTDRPEVDVTTTPPI
INNKKNSNFLLLRKLEVAEGGRAPLEPKHMRVNLDFRKLGIHPSQLMFRIEGQPVHGQLR
LDLSPDPDGMLDEGQDRTITIGAEEVDRTFSMLDLWQGRVMYVHGGSEDQQDFFMFSVFS
SNKKKLPVFLKGNRLHRFDISISPVNDAPVLSLPEGNLFTLVEKSKRPLTTDVLRVSDPD
SSPAELVFSSLGNLNTDVGHLEHQDYPGRAINLFCLNDLEEGKISFVHTGVPTSRLALRV
SDGQKLSNTVVLRIMAVPLEHKLVNNTGLEVYQGGAAIITTFHLAVQVNVADQTVEIRYD
ITELPQYGELQRLHSSGDWKPTTSFSQKLLEKERIRYLSTYHGLQNKNNITDHFKCNISI
GYLATEEVVFLIMVHLIHFKVTRSKMEVNGVQTAAVTPEDLHVISKGVKLDESDLYFRLL
TVPKKGQLFLNNKVLQRNSTFNQKNITDGLVKYELLNRLHDDTRDTFSFQVFSTHASSTT
YDFRINIKAESTAITVVNKGLSVLEGGSKVINKDILFTHTASNREVQYSITVSPRHGQIR
RINLSNSTSINDNIVTFTNQDIIGERIMYVHDDSETKQDSFTFQIMVYKPHKHTSKKEDR
NTAEHTFNISVQLVNDQRPVRVVDKVFHVARDGQRLVTLNDLRYRDDDSNFEDSWLVYTR
RGIPMGELVLASDTSHKLYEFTQRDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSALLEV
MAQDPYLQAENNTGLTVQRGGITTLTSANLSVFSNLDIRDPQEVTFKVFLPPKHGVLCFN
DADRETVTEADAISIFTQQDLVVGRVAYHHDGSHELSDWFNVTAGAREKSTERRLDRGRR
EVHLDIGVPVKIYLESHQRPPTVISNHPVVVAEGQNVSISREHLEVVHEDSQPSEIVFTV
QSPPTLGFLQRFSPNDKHQNNNGEQQHLYQAIREQATNSFTQEDLNQGLIIYHQQAAGST
NDSVLLEATNGVTKVGPIRLEIDIIPILLPLQVKNVSDLTLDEGSSLPLTSDIIKVANHH
FSGMNFLYQVIVPPRNGHLEHSRIPGMPITAFTHTEVEREYISYIHDGSDTQRDNFTIVA
NQTEIRKHSLPCTVHINIKPVNDETPVVATNKGLKVWVGSVTEITINDLSAEDSDTLSEG
LEFIVTPPSNGYLALKSAPSRHILNFTQNHIQTGQLVFVHSGALSGGFHFQVNDGVNFAP
RQIFSTSAHSLVLTLQRNHPMEVYPGSVTPISEQELQAVTNDVIDIRRNHSVVFAVTAPP
KLGRLVRRMPDNSTLNISTFTQSMVNDGIILYDQNKPESVGWSAADAFSFTVSSPPAFLP
PHTFTILISYQANEHHDNPQHKTRLLNNAGAVVAEGGRVMIDRSKLDASNLLGKVPEPHR
KDHHILYRVISLPRHGALSIRGHNLTRNQPDFSQVTLNKLGITYIHDDSETTSDSFTFRA
WVAPLDLSSSSSSSSLSAFSSDSSSSFSPLYSASSSSLSSLDVISHPRVKDSLAVTETFN
ITVTPVNDQPPLIRSRTPSMKVVVGERVVLGPDNLQVEDHDTPPEELHYLVISKPNNGYL
TLGERPEPVTSFTQYDVNHGRLHFIQQGEPSTGVFYFNVTDGHHRPLYRLFSLEVIKPSV
SMVNNTGLSLVQGRTAVVLATNQLAAQTNSRSPANITYTVTTHPRHGRIAINDQEVTTFC
HEDLQFGRVVYHMTDLSESEDSFQVSVSASSPDVDYGNVTAQTVKVTVRPLIYLREPVRV
PSGIAVKLGKAMIDASELARISRADPVFEVLSSPKHGKLVKMTYDPNRASEVLKSFTFRD
VVQGRVAIKETLSDGDNQLHNNKSALATARGHAPATPLNDSFIFLLKAGNVQPAKGELHF
TIFPHHQMHHVPSVSNKADGASREHTTTLLPTHNRTTTGGGRGGGRGGSTTRSGIGVGLP
PDILLHKNNNKTQHKLRPHSRWGNHTRSGSHGGRSGSSAEGAGGGHSHAPQPHSPSVSDK
HGPANPPDIHPVHVEVLPRPASDPLLIILPLLSCLLLIIILVVLILVFRRRKEKQAQLRL
LQQLAAVALPTDEGTEGSPYLGRAERSVAMPSVVVTPLGPRSCPNSPRVTISPRRKSLAP
GMTFWGPFEADRGGGDRIIRGGNSSERDNVPCGNAVPAVTAGFKTSLRSRSPTPTLKDNQ
YWV
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggggagttttgtgaccaatctgtttctgctcctgctgattgccacaggacaagtttat
ggagtgtcattctacggtgatggctacatccacctgcggacagtggaggcatccattcag
acgttgctccatgtacgatttcgaacctccagtcaggcggggctgctgtttttggcagct
ggacgcagagacttcttgctgctggagctgatctctggacgcctgcaggtacgtctggac
atgggctcaggtgagcgttcactacgctcagaaaaaggcatccatcttagcgacctggca
tggcactccatagagctgacccatgaccaccataatgtcaacatgaccgtggaccgaaac
tctcatacccggctccgtataccaggaccagatctggagctcagtgttgaggacgggctt
tttgttggtggggcagctggactgaaccacccataccttctcaacatctctgctgggttt
agaggttgcgtagatgaagttgtgttcaatgaacataacctgctgtccagcctaaggccc
tattctgggtacaagagtgtccacgaggtatctctgggctgtagtccgcagttttctgca
acagaagaagattctgtcagttttttcagctctaaagcctttatctctctcccgccgtgg
gaggtgccacaggagggggtgtttgaatgtgaattgcacccctctgcaagagaagaagat
ggcatgatcctgtatagctctggcaaccagggagggtttgttgccatagagatcagagat
ggtcacctggtggcaacggtaggaaatggagaggggagtaagactgagctgcgttctcta
acacatgtccacagcaaccacacctggtatcccatcctgctgcacctgcagccccacagc
gtccagctgaaggtgggtgaagaattgatcaaggccaacctgaatatggagctccaggtt
atccagctcaaagggcctctcttcctgggagggctggacgaagatgcccggggagaggca
aggcgagctgggctaatgtccgctgtgcctggggggaaactggctgggggaggaggctcc
tttaaaggctgcctccgcaaaatgagggtgaacactcaaagaacaggcctacctcatgct
gccatcactaaggacatcactgtgggatgtaagacaggcagcaggcaagctccagatgca
gtgaccaccaccagcccaacagatcgtcctgaggttgatgttacaaccacaccaccaatt
atcaacaataagaagaactctaactttttgttgctgagaaagctagaggtagctgaggga
ggccgggcaccactggagcccaaacacatgagggtgaatctggattttcggaaattgggc
attcatccatcccagttgatgttccgcattgaggggcaacctgttcacggccagctccgt
ctggatctcagtccagaccctgatgggatgctggatgagggacaggacaggactatcaca
attggagcagaagaggtcgaccggacgttcagcatgctggacctgtggcagggcagggtg
atgtacgttcatggtgggtcagaggaccagcaggacttcttcatgttttcagttttctcc
agtaataagaagaagcttcctgtgtttctgaagggcaaccgcctgcaccggtttgatatt
agcatcagtcctgttaatgatgcacctgtgctcagcctgccagagggaaatcttttcact
ctggtggagaagtccaaacgaccgctgacaacagatgtgctgagagtgtcggaccctgac
agcagtcctgcagagctggtgtttagctccctgggaaacctcaacactgacgttggacac
cttgagcaccaggattaccccggaagggccattaacttgttctgcctgaatgatctagag
gagggtaagatcagctttgtccacactggggtccccacctccaggctggcactcagggtc
agtgatgggcagaagttgagcaacacagtcgttttgaggattatggcggtgccactcgaa
cacaaactggtgaataacaccggactggaggtgtaccaaggcggggctgccatcatcaca
acctttcaccttgcagtacaagttaatgtggctgatcagacagtggaaatccgctatgac
attacagagttgccacaatatggtgagctccagcggttgcactcaagtggcgactggaaa
ccgacaacttccttctctcagaagcttctggaaaaagaacggatccgatacctcagcact
tatcatggccttcagaataagaacaacatcactgatcacttcaaatgtaacatcagcatc
ggttacctggctactgaggaggttgttttcctcatcatggtacacttgatccacttcaag
gtcacacgcagcaagatggaagtcaacggtgttcagactgctgctgtcactcccgaggac
ctgcatgtgatttctaagggtgttaaacttgatgagagtgacctctacttcaggctccta
acagtcccaaagaaagggcaactattcctgaacaacaaagttctacaaaggaactcaacc
ttcaaccaaaagaatatcaccgatggcttggtgaagtacgagctgctcaacaggctgcat
gatgacacaagagacacattcagctttcaggtgttttcaacacatgccagctcaacaact
tacgacttcagaatcaacatcaaagccgagtcgactgccatcactgttgtaaacaaaggc
ctttcagtcctggaaggaggaagtaaagtcatcaacaaagatatcctgttcactcacact
gcaagtaaccgggaggtccaatacagcattacagtgagccccaggcacggacagataaga
aggatcaacctttccaactcaacttccattaacgacaacattgtgacattcacaaatcag
gatatcattggggagaggatcatgtacgttcacgatgacagcgagaccaagcaggattcc
ttcacttttcaaattatggtttacaaaccacacaaacacaccagcaagaaggaggataga
aacacagccgaacacacctttaatatctctgtgcagctcgtcaatgatcagagacccgtc
agggttgtcgataaagttttccatgtggcccgcgatgggcagagattggtgacgttgaat
gaccttcgttaccgggatgatgactcgaactttgaggacagttggttggtgtacacgcgg
agggggattccaatgggagagctagtgctggccagtgataccagtcacaagctgtatgag
ttcacacagcgggacctcgagcagaaaaaggtgttgtttgtccacagaggagtgagtttc
gggcgttttgtgctttttgtatcagatgggaaacattatgtttcagcactgctggaggtg
atggcccaggatccttaccttcaggctgagaacaacacaggcctcacggtccagcgaggt
gggatcacaaccttgacctctgctaacctcagcgtcttcagcaaccttgacatccgagac
ccacaggaagtgacatttaaggtcttccttccacctaaacacggtgtgctctgttttaac
gatgcagatcgtgagactgtaacagaagcagatgcaatttcaatattcacccagcaagat
ttggtggtagggcgagtggcatatcaccacgatggcagccatgaattgtctgattggttc
aatgtgacggctggagcaagggagaagagcacagagaggcgactggacagagggaggagg
gaggtacatctggacatcggagtgccggtaaaaatctacctggagagtcaccagaggcca
ccaacggtcataagtaaccatccagtagtggtggcagagggacagaatgtctccataagc
agggagcacttagaggtggttcatgaggacagccagccctcagagatagtttttactgtc
caaagtcctcccaccctgggcttccttcagaggttttcccccaacgacaagcaccagaac
aacaatggagaacaacagcacctctatcaagccatcagagagcaggcaacaaactctttc
acccaggaggacctcaaccagggattgatcatttatcatcagcaggctgcaggaagcacc
aatgactctgtactgttggaggcaaccaacggggtcacaaaggtcggacctatcaggctg
gagattgatatcatccccatcctgctgcctctacaggtaaagaatgtgtctgacttgacc
cttgatgaggggtcgtccctgccactgacctctgacatcatcaaggtcgccaatcatcac
ttctcagggatgaacttcctgtaccaggtcatcgttcccccacgaaacggacacttggag
cacagccggatcccggggatgcccatcactgctttcactcacactgaggtggaacgtgaa
tacatctcctatatccacgatggcagcgacacacagagagacaactttaccattgtggcc
aatcagacggaaatcaggaagcacagtctgccctgcacagttcacatcaatatcaaaccc
gtcaacgatgagactcctgttgttgcaaccaacaagggtctgaaggtgtgggtgggttca
gtgacagaaatcaccataaatgatcttagcgcagaggactcggacactctgtccgagggg
ctggagttcatcgtcacaccacccagcaatggctacctggccctgaagagtgccccctcc
agacacatcctgaacttcacccagaatcacatacaaaccggacaactggtgtttgtgcac
agtggtgctttgtcaggtggctttcacttccaggtgaacgacggcgtgaactttgcccct
cgccagatcttcagcacatctgcccactccctggtcctcaccctgcagagaaatcatcca
atggaggtctacccaggctctgtgacaccaatctctgagcaggagcttcaggccgtaacc
aacgatgtcattgacatcagaagaaaccactctgtggtgtttgcagtgaccgcacctcct
aaacttggtcgcctggtccgacgtatgcccgacaactctacactaaacatttccacgttc
acacaaagcatggtgaatgatggaattatcttgtatgatcagaacaagccagagtcagtg
ggatggtcggctgcagatgctttctctttcaccgtgtcctcccctccagctttccttcct
ccacacaccttcaccatcttaatctcctaccaggccaacgaacatcacgacaaccctcaa
cacaagaccagactactgaacaacgcaggtgctgtggtggccgagggaggtagggtaatg
attgacaggtctaaactcgatgcctcaaatctccttgggaaagtcccagagccccaccgg
aaagaccaccacatcctgtaccgtgtgatttccctgccacgccacggggctctgtctata
cgaggacacaacctcaccaggaaccaacctgatttctcccaggtcaccctaaacaagtta
ggcatcacatacatccacgatgactcagagacgacgagcgacagcttcactttccgggcc
tgggtggctcctctggatctctcctcgtcttcctcctcatcttccttgtctgctttttcc
tccgattcctcctcctccttttcccctctctattcagcctcatcgtcctccctttcatca
ttagacgtgatttctcatccccgtgtcaaggacagcttggcggtgacagagacattcaac
atcacagtgacgccggtcaacgaccagccgccactcatcagaagcagaaccccgagtatg
aaggttgtagttggagaaagagtcgtactcggaccagacaatctgcaggttgaggatcat
gacacccctccagaggagctgcactacctcgtgatcagtaagcccaacaacggctacctg
acactgggggaaagaccggagccagtgacctccttcacccagtatgacgtcaaccacggc
cggctgcactttatacagcagggtgagccctcaacaggtgttttctacttcaacgtaacc
gatggtcatcatcgtccactctacagactgtttagtttggaggtgataaagccctctgtc
tccatggtgaacaacactggcctgtcattggttcaaggcaggaccgctgtggtcctggca
accaaccagcttgcagctcaaaccaacagtcgcagcccggccaacattacctacacggtc
accacacaccctcgccacggacgcattgctattaatgaccaggaagtcacgaccttctgc
catgaggacctgcagtttggccgtgttgtctatcacatgactgatctcagcgaatcagag
gacagcttccaagtctcagtgtcagcttcatcccctgatgttgactatggaaatgtaact
gcacagacggtgaaggtaactgtgcggccgctgatctacctgagggagccagtaagagtg
cccagtggtatcgctgtgaaactggggaaagccatgatcgatgcttctgagctggcgaga
atcagccgagctgacccggtctttgaggttctatcttcaccaaaacatggaaaactagtc
aagatgacctatgaccctaaccgcgcatcagaggtcctgaagtcgtttacgttccgagat
gtggtgcaaggccgggtcgccatcaaggagactctcagtgatggtgacaaccagctccat
aataacaaatcagcacttgcaacagctcgaggccacgcccccgctacacctctcaatgat
tctttcatcttcctgctgaaggccggaaacgtccaaccagcgaagggcgagcttcatttc
accatctttccccaccaccagatgcatcatgttccaagtgtttcaaataaagcagacggt
gcaagtcgtgaacacacgacgacccttctgccgacacataataggactactaccggagga
ggaagaggaggtggacgagggggatccacgacgcgcagcgggatcggggtgggattgccc
cccgacattttgttacataagaacaacaacaagacacagcacaagttgaggcctcacagc
cgctgggggaaccacacacgcagtgggagtcatggaggaagatcagggagcagtgcagag
ggagcagggggaggtcacagtcatgccccacaaccacacagtccttctgtctcagacaaa
cacggcccagcaaaccctcctgacatccacccggttcacgttgaggtcctccctcgccca
gcatccgaccctcttctcattatcctgccgctgctgtcgtgtttgctcctcatcataatc
ctcgtagttttgattctggtgttccgtcgccggaaggagaaacaggcccagctgcggctc
ctccagcagctcgctgcagtggcgttacccactgacgagggcactgagggcagcccttac
ctgggccgggcggagcggagcgtggctatgccctctgtggtggtcaccccgctgggccct
agaagctgccctaactcacccagggtaaccataagtcccagaaggaagagtctggcccct
gggatgaccttctgggggccatttgaagctgacaggggaggtggtgatagaattattaga
ggtggtaacagtagtgaaagagataatgtaccatgtggtaatgcggtaccagctgtcact
gcaggattcaagacctctctgagatctaggtctcctactccaactcttaaagacaaccag
tactgggtttga
DBGET
integrated database retrieval system
