Siniperca chuatsi (mandarin fish): 122865719
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Entry
122865719 CDS
T08948
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03420
Nucleotide excision repair
schu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122865719 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
122865719 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
schu03051
]
122865719 (rad23b)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122865719 (rad23b)
Proteasome [BR:
schu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122865719 (rad23b)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122865719 (rad23b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
CUE
UBA_3
OTU1_UBXL
DUF3391
Metal_resist
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122865719
NCBI-ProteinID:
XP_044030479
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Position
LG18:complement(10234999..10245036)
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AA seq
383 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKTLKEKIEQEKGKDHFSVSGLKLIYAGKILNDDTAIK
EYKINEKNFVVVMVTKTKTASAAQQPSPATSAPSTTAPAAPPASSSSSENTTERASTDDK
PEERQSSSAEPASTPVGSSEASTNTSLIDEAVSTLVTGPSYDAMVNEMMLMGYEREQVVA
ALRASFNNPDRAVEYLLTGIPGRGDQGHATGPDAVVPPVSGAPAAPTSGISIPANTGSSP
SAGGGNPLSFLRNQPQFQVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQML
NEPNPEAVQVGGGGGAGAGGVAGDTPGGSHMSYIQVTPQEKEAIERLKALGFPEGLVIQA
YFACEKNENLAANFLLQQNFDDD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaaaaccttacagcagcagacgttcaaaatcgacatcgatgaagag
gagacggtgaagacactaaaagagaaaattgaacaggagaagggaaaggaccatttttca
gtttctggactgaaactgatatatgctggtaaaatcctcaacgatgacacagccatcaaa
gaatacaaaatcaatgagaagaactttgtggtcgtcatggtgacaaagactaaaacagcc
tctgctgcccaacaaccttcacctgccacttcagctcccagcactacagctcccgcagca
cctcctgcctcatcgtccagctcggaaaacacaacagagcgtgcctctacagatgacaaa
ccagaggagaggcagtcttcgtctgctgaaccagcttccacccctgtcggaagttctgag
gcttcaacaaacacaagcctaattgatgaggctgtttcaactctagtgacaggcccatca
tatgatgccatggtgaatgagatgatgctcatgggctatgagagggagcaggtggtagca
gctcttagagcgagcttcaacaacccagacagagctgtggagtacctgctcacgggtatt
ccaggcagaggagatcagggccatgcaacaggaccggatgcggtggtgcctccagtgagt
ggagcgcctgctgcacccacaagcggtattagcattcccgccaacactggctcttcacca
agtgctgggggaggcaaccccttgagtttcctaagaaatcagccccagttccaagtgatg
cgacaactgatccagcagaatgccgccctgcttcctgccttgttgcaggagattggcagg
gaaaaccctgagctgctgcaggagattagcagccaccaagagcagttcatccagatgctg
aatgaacccaatccagaggcagtgcaggtaggtggtggaggtggagcgggagccggaggg
gtggcaggtgatacacccggcgggagtcacatgagctacatccaggtcacgccacaggag
aaagaggccattgagaggctaaaagccttaggatttccagagggacttgttatacaagcc
tactttgcttgtgagaagaacgagaacttggccgccaacttccttttacaacagaacttt
gacgacgattaa
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