KEGG   Siniperca chuatsi (mandarin fish): 122865739
Entry
122865739         CDS       T08948                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:schu03016]
    122865739 (pus1)
Enzymes [BR:schu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     122865739 (pus1)
Transfer RNA biogenesis [BR:schu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    122865739 (pus1)
 Prokaryotic type
    122865739 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 122865739
NCBI-ProteinID: XP_044030507
LinkDB
Position
LG18:15717620..15720111
AA seq 421 aa
MFKIRPLLSVLVNHRLTSERNGGLYKFFCMMSEGSRDEQTAKLLKRANEENEDSAERVQV
TKRIKAEGEPTEDEKKYPKKKVVLLLAYSGKGYYGMQRNPGTSQFRTIEDDLVTALIKSG
CIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIDKINEHLPPQIRVLGLK
RVTQGFNSKNNCDARTYSYMLPTAALSPKDYDTGNIAAFRLSPETLQRVNCLFSLYKGTH
NFHNFTSQKAASDPSARRYITEMSCGEPFICSNTEFAVITVRGQSFMLHQIRKMIGLVIA
VVKGYAKEEVMQRSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWDREEE
AIKAFKEAHIYPTIVETECQEGSMVSWMSTLPIHDFEATATDTQDNEDQKQDNADVGNNS
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttaaaatccgaccactgttgagtgtcttagttaaccacagactgacgtcagagaga
aacggtggcctttataagttcttttgcatgatgagtgaaggatccagagatgagcagaca
gccaagctgctgaaaagagccaatgaggaaaatgaagactctgctgagagggtgcaggtt
acaaaaaggataaaagcagagggggaacccactgaagatgaaaagaaatatcccaaaaag
aaagtggtcctccttttggcatactcaggaaagggatactatggcatgcagagaaatcct
ggaacctctcagtttaggaccattgaagatgatctggtcactgcgcttattaaatctggt
tgcattcctgaaaaccatggcgatgacatgaagaagatgtctttccaaagatgtgccaga
acagataagggtgtgtctgcagctggtcaagtggtgtctctaaagctgcggttgattgaa
gacatcattgacaaaatcaacgagcatctgccaccacagatcagagtgctcggtcttaaa
cgggtgacccagggtttcaattccaaaaacaactgtgatgcccgtacatactcctatatg
cttccaacagcggccttatccccaaaagactatgatactgggaatatagcagcctttcgc
ctctctccagagacacttcagagggtgaactgtctgttttctctctacaaaggcacccat
aatttccacaacttcacctctcagaaggctgcaagtgaccccagtgcccgccgctacatc
acagagatgtcttgtggagagccttttatctgcagcaatactgaatttgcagtgatcact
gtgcgaggccagagctttatgctgcaccaaatccgcaagatgatcggactggtgattgcg
gtggtaaagggctacgcgaaggaagaagtgatgcaacggagctggggacaggagaaggtg
gacgtgcccaaagctccaggactggggctggtcctcgaaagggttcactttgaccggtac
aacaaacgattcggaggggacgggctgcatgagcgtctggaatgggaccgcgaggaggag
gcaatcaaggccttcaaggaggctcacatctaccccaccattgttgagacagagtgtcag
gagggctccatggtcagctggatgtccacacttcctatccatgactttgaagccacagct
actgacacacaagacaatgaggaccaaaaacaggacaatgcagatgtaggaaacaactct
gattag

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