Siniperca chuatsi (mandarin fish): 122865759
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Entry
122865759 CDS
T08948
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122865759
03041 Spliceosome [BR:
schu03041
]
122865759
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122865759
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122865759
SSDB
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_ACIN1
RRM_3
Calcipressin
RRM_Nup35
Nup35_RRM_2
SCO2_C
Motif
Other DBs
NCBI-GeneID:
122865759
NCBI-ProteinID:
XP_044030537
LinkDB
All DBs
Position
LG18:4962543..4975371
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AA seq
385 aa
AA seq
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MDDDLPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQTMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGGMV
EPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgacctgcccaaaaccctgtatgtgggaaatctgtccagggacgtgacagag
gccctcatcttggagttgtttagccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcacgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccatgtctttgttgga
gatctaagtcctgaaattaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaatgccatacagcagatgggaggacagtgg
ttgggaggcaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaactaca
aatgaaacaaccaataccaagcagctatctttcgatgaggtggttaaccagtctagcccc
agcaactgcaccgtctactgcgggggagtcacaacaggtctcacagagcaaactatgaga
cagaccttctcacctttcgggcaaataatggaaatccgagttttcccagacaaaggctac
tcgtttgtgaggttcaactcccatgaagcagcagctcatgccattgtttctgtcaatggc
acatccatagagggctatgttgttaagtgttactggggcaaagaaacaacagacatggtt
agccccattcagcaggtacagatgccacagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacacagcagattggtcagtatgtgcccaat
ggatggcaggtgccaagctatggagtctatggacagacctgggatcagcagggctacaat
catttacatgctggtgccgggtggactggtgtgggcgctgtgagcaacgggggcatggtg
gagcccgggcagggagtcaacgggacggtgctaaccaaccaggctggcatgagcactgct
ggctaccacacccactga
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