Siniperca chuatsi (mandarin fish): 122865860
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Entry
122865860 CDS
T08948
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122865860 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122865860 (wdr36)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122865860 (wdr36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
122865860
NCBI-ProteinID:
XP_044030741
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Position
LG18:377068..389452
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AA seq
887 aa
AA seq
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MPGGGSSLFSGFRVLGLYSNHVPHALRYHKKHREFYVVTAVGKCFHTYNVNRLGIVAVSN
SLSDDISCMAADRMLVFAAAGRLISAFARNKEVVMRYHGHRQEVRLLLPLGDQLISADSG
GDVIVWDVQGGDIYLRLQFDPATFDVSAMMHPSTYLNKVLLGSSQGALQLWNIKTSKLLF
TFPGWSAGVTVLNQSPAVDVVGIGTATGRIIIHNIRLDETLMSFTQDWGPISSLAFRTDG
PPIVASGSPQGHIAFWDLERRQLVTQQRHAHSTAVAAATFLHGEPLLVTNGADNAIKVWI
FDQEGGGARLLRRRQGHSAPPTTIHHHGNDGKNILSAGQDGTLQSFSTVHERFNKNLGHG
SINKKKEQKKKKGLSYEELRLPAITAFSSAAARQSDWDGIVACHRGRLATTTWNYQRCTM
GAHHLQPPVTRRDAIATAVDITSCGNFAVIGSSCGRVDVYNLQSGLHRGCYGDEEKAHSG
AVRGVATDTLNQLTLTAGSDWLLKFWRFKSRKQEEQLKLNAAPASMMLHRDSGMLALALD
DFTLLVVDIETRRVVRKFVGHHGNINNMTFSPDGRWLVTVAMDCTIRTWDLPSGCLVDCF
LVAMAPVGVSLSPTGDFLATAHVDSLGVYLWTNKSLCGPVGLRPLPADYQPAEETLPGVT
ADESEQEVMSEEVEDAYESAEQLGAELVTLSLLPESRWKSLLHLDTIKRRNKPVAPPAAP
AAAPFFLPTLPGLTPRFTSPTATEQETQSKLLSWGLLSQRSEFSAGLESALQSGSFDRPV
RLLKDCGPAALSVELTCLTSEGGGASHLLLAFIHMIDSMLASGRDFDLAHAYLALFLKLH
LRALSQDAVAMAALLRLSSRLETGWAELRASLDQSLCLLSYAKSALL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcggcgggagttctttgttctccgggttccgggttctgggactttattccaac
cacgtgccgcacgcgctccggtaccacaagaagcaccgggagttttacgtggtgacggcg
gtcggtaaatgtttccacacgtacaatgtgaaccggttggggattgttgctgtcagtaac
agcctatcagatgacatcagctgtatggcagcagacaggatgttggtatttgccgccgcc
ggacgtctcatcagcgccttcgccaggaacaaagaggtggtgatgcgttaccatggacac
agacaggaagtgcgtctgctgcttcctctgggtgatcagctgatctctgctgacagcggt
ggtgacgtcatcgtttgggacgtccagggaggagacatctacctgcggctgcagtttgac
cctgccaccttcgacgtgtcggccatgatgcaccccagcacctacctgaacaaggtgctg
ctcgggagctcccagggtgcactgcagctctggaacatcaagaccagtaagttgttgttc
acgttccccggctggtcagcaggagtaactgttctgaaccagagtcctgcggtggatgtg
gtcggcatcggcacggcgacggggcgcatcataattcacaacatccgattggacgagacg
ctgatgagcttcacacaagactggggaccaatcagctcgctcgctttcagaacagacggt
cctcccatcgtggcatctggcagtcctcagggccacattgcattctgggatctggagcgc
cgtcagctggtcactcagcagagacatgcccacagcacagccgttgccgcggcaaccttc
ctgcacggagagccgctattggtcaccaacggagccgacaatgccatcaaggtgtggata
tttgaccaagaggggggtggagccagattgctgcggcgtcgtcagggccacagtgccccg
cccaccaccatccatcaccacggcaacgacggaaaaaacatcctcagtgctggtcaggat
gggacgctgcagtctttctccaccgtccacgagcgcttcaacaagaacttgggtcacggc
tccattaacaagaagaaagagcagaagaagaagaaggggttgtcctacgaggagctgcgt
cttcctgccatcacggcgttctcctctgctgctgctcgtcagtcagactgggacggcatc
gtcgcttgtcatcgcggtcgcctagcaaccaccacgtggaactaccagcggtgcaccatg
ggagctcaccatctgcagccgccagtcactcgcagggacgccatcgctacggctgtcgac
atcacttcctgtggcaacttcgctgtgattggctcatcatgtggccgcgttgatgtctac
aacctgcagtctggcctgcaccgtggttgctacggcgacgaggagaaagctcacagcggg
gcggtgcgaggcgtcgccacggataccctgaaccagctgacactcacagcaggctctgat
tggctactcaagttctggcgcttcaagagccggaaacaggaagagcagctgaagctaaac
gctgcgccagctagcatgatgctgcacagagacagcgggatgttagcattagcgctggat
gacttcacgctgctggtggtcgacatagaaaccagacgggtcgtcaggaagtttgtaggt
caccacggcaacatcaacaacatgaccttcagccctgatggccgctggctggttaccgtg
gcgatggactgcaccattcgtacctgggatctcccgtctggatgtctcgtcgactgtttc
ctggttgccatggcgccggtgggcgtgtccttgtcaccaaccggagacttcctggcgacg
gcgcacgttgacagtctgggcgtttacctctggaccaataagagtctgtgtgggcctgtg
gggctccgccccctcccagctgactaccaaccagctgaggagacgctgccgggggtcaca
gcggacgagtcagaacaggaagtgatgtcagaggaggttgaggatgcgtacgagtcagct
gagcagttgggggcggagcttgtgactctgtcgctgctgccggagtctcgatggaaaagt
ctgctgcacctcgacaccatcaagaggaggaataaacctgtagcgccccctgctgctcca
gccgctgctcctttcttcctgccaacacttcctggtctcacgcctcgattcacgtcgccc
acggcaaccgaacaggaaacacagtcgaagctgctgagttggggtttgttgtctcagagg
tcagagttcagcgctggtctggaatcagctctacagtctggatccttcgatcgcccggtg
cgtctcctgaaggattgtgggccggcggcgctctccgtggagctcacctgtctgacatca
gaggggggcggagccagccacctgctgctggccttcattcacatgattgacagcatgttg
gccagtgggcgggactttgatctggctcatgcttacctggcgcttttcctgaagctccat
ctccgcgcgttgtcgcaggacgccgtcgccatggcagcgttgctccgcctctcgtcccgg
ctggagaccgggtgggcggagctacgggcatcactcgaccaatcactgtgtctgctgtcg
tacgccaagagcgcgctgctgtga
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