Siniperca chuatsi (mandarin fish): 122865886
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Entry
122865886 CDS
T08948
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122865886 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122865886 (exosc2)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122865886 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122865886 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
122865886
NCBI-ProteinID:
XP_044030819
LinkDB
All DBs
Position
LG18:complement(12516044..12519886)
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AA seq
293 aa
AA seq
DB search
MAADMRLPTIRKPVSLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QKVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVHHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcgaaaaccagtgtcgttatcagtttctgct
ttcgaccgaaaagatctggtcgtccccggcgatgttatcacttcagacactggtttcatg
aggggtcatggtacctatgttgatgaagacaagctgacggcttcagtcgctggagaggtg
cagaaagtagacaagcttatctgtgtcagaccactcaagaccaggttcaacggtgaggtt
ggagatgttgtggttggcaggatcacagaggtccaacagaaacggtggaaggtggagacc
aactcccggctggactctgtcctcttgttgtcttctgtcaatctgcctggaggagagctg
aggagaagatcagcagaagatgaactcaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtacagtctgtcttctcagatggagccctgtcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtacagctttctccttctctgatcaag
aggcagaaaacacatttccacaacctgccatgtggcgcatccatcatcctcgggaataac
ggctttgtgtggttgtatcccacaccggaacaacaggaggaggaagctgggggcttctac
acaagcctggagccggttagtctttcagatcgagaggtgatctcacggttgagaaactgc
ctactggctttggctgcgcacaaggtccttttgtatgacaccagtgttctctattgctat
gaatcttcagttcaccaccaggtcaaagacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttggaacaggaaggttaa
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