Siniperca chuatsi (mandarin fish): 122865936
Help
Entry
122865936 CDS
T08948
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122865936
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
122865936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
122865936
NCBI-ProteinID:
XP_044030918
LinkDB
All DBs
Position
LG18:12094111..12173380
Genome browser
AA seq
2116 aa
AA seq
DB search
MTTTANWVANGASLEDCHSNIFSLAELTGIKWRCYGFRSGGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHELEEKSLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYHITEHHIHLAQASITPVQVILSPYGLSGTLTGQAYKMSDPAARKLMEEWS
YFYPMVLQQKEGSGEKEKEEASQAYDHNCHVAVEVIVGGVRMTYPAALVLIAQGDLPVEQ
PPPVPAAQGLNREPNHCSVPLTPPTSPQQPCSADSGFVTSVSSVPTPDSSMGVTSISPKH
SGKKLTCQVVHQAWRECYLTQPQNVPNQPTDVTSKKEVPNGVTTWDFNDLGARASCSCSR
LKQQKLNLTTTSTANPQTSANPTQSSGPSLYPPSLPKHKTSDKTEKADKQSKRPATIPFH
HRLSVTQETHLEQDSPGGPQLGGLVALEPPLEPLAALPSCKYPKPLSNGRKAPESLLHSP
MSPLPPTLSPHPRDPEVLDGPVDMPVCPDGASGLGMITSETAVYAALLRQRENGAGWWRG
FRTPRTDKTDFRPPELPTGKLEDVRTETVTEGAPLKRLYTQTPKRFKISEERVRDHIHTL
GLFQQPGVEALREPGDDPYDFKEGDIEYTFSTSKRLKSQGREPSKKVKGEEITSNGALPD
GKDAMSIFNSAPKSDESSQDDAAAKANPSLTREKDLVVNISDLDNIFDEDEEELGTVYPN
QHSTKLPVSTEDRPLGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRDTPSQ
EPPAPSGAADHLPPLASTQFTEYRMEFEEDVASLRQEDIKPQIGSSMFAPLSCLPSQSLP
PLKIPEQCYYRPSWALMPKMEHFPTVMHPQNNTFIRDGYTNIPSVNTLTDQEYGQMSATT
ASVSTTVGILPSPATPRFSVPTPRTPRTPRGINAASSGQGSVKQDGTELSSPVSTPSTSL
PLSSVEPLARPGPSLPEAHSLYAVLLLSDSVLNVFKDRNFDSCCICACNMNVKGADVGVY
IPDSTCEDQYRCMCGFSAIVNRLLAHGTGLFLEDELDIYGRTSEVGRAAERRLALCRRDP
TMGDPRAKRPQDVAPASPLVMVLLQEQCSQPISSLASLHLPLSCSCHGRKGALLQSWMSE
KQWADGSDACVECYNALEQGLQYVDNPTGGKVDPAIVRSSALHSWPHTNVVDMSMLSSQD
MVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPI
PTVLLGYDRDRDFLALSPLALPFWEKLLLEPYGGQRDVAYVVLCPNSPSLLAAARAFFQE
LSTVYETCRLGKHRPLAKVSRDGLVRVGEEVEPEKLEELAVDQWLTGPWAGQQHADNLSK
LKLYAYACKQHLGPQLSALPLDSSLLLPPKVQPPLNPTSSAQPASSGQPQAWGPDGEQAP
GAASTGNAPTPSGATSNQMGETTQGATSDSKGPSSATPPANTPAENPELTPEQSRIGIPT
VADSMESHANPPAIVIYIVDAFLSSSGARNEGGEEEEGGDVEAGSIWLLGLLRCYTEMLQ
TLPETIRPALVLQVVPCQYLLQPASGENHLYLQHLRSLAFSCYSQCRRLLPQQIHIKSLT
GFGPVSTVNSVLKSPEHPSPLQLYCPPFILGPTRPKQPEPGEIWAELPPKYNVLFVGYCL
SHDQRWILVSCTDQQGELLETCIINIDVPNRARRPKVSARRMGLQKLWEWCIGIIQMTSL
PWRIVIGRLGRLGHGELKDWSSLLGEHSLHSIGRQLKEACRICGISAADSPTILSACLVA
MEPQGSFVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSY
PTEDNNDDMFDLPFPDELENDIGHDMMLITGNLHPSPNTSPVPSPGSPSGMGMGSHFQHT
KNQGERLLSRDSPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKASLH
HHISIAQSDELVSDKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPV
HLAVLIQMYNAILNML
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacagcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttgacgggcattaaatggcgttgctacggcttccgcagtggc
ggggagtacgggccagtgatctctgccccggcccaggatgacccggtcctgcgcagcttc
atgcgctgcgtgcaggccaacctgctgtgcgtatggcgacgcaagatcaagcccgacgcc
aaggagctgtggatcttctggtggggtgaagagcccaacctctctgatgtcattcatcat
gagctggaagtggctgaggaggggctttgggagtgcggactgtcctacgagtgccggacc
ctcctgttcaaggccatacacaacctgctggaaagatgtttgatggataaggggtttgtg
aggattgggaagtggttcttcaagccacatgaactggaagaaaagtctttgggcaacagt
gaacacctatcatgctccttctccttcttccttcacggggagagcaacgtgtgcacgagt
gtggagatcgcccagcaccagcctgcataccacatcacagaacaccacatccacctcgca
caggcctccatcacaccagtacaagtgatcctgagtccatacggtctgagcggcactctg
acaggtcaggcctacaagatgagtgacccagcggctcggaagctgatggaggagtggagc
tacttctatcccatggtacttcagcagaaagagggaagtggagaaaaggaaaaagaagaa
gcaagccaggcctatgatcacaactgtcacgtggcagtggaggttatcgtgggtggagta
aggatgacctacccagctgctttagtgctgattgcccagggggacctaccagtggagcag
cctccacctgttcctgcagctcaaggcctcaacagggagccaaaccactgcagcgtgccg
ctcacaccgccaacgtcaccgcagcagccctgctcagcagacagtggctttgtgacctcc
gtctccagtgtccccacaccagacagcagcatgggggtcaccagcatcagcccaaagcat
tctgggaagaagctaacctgtcaggtagtccatcaggcctggagggaatgctatctcacc
cagcctcagaacgtaccgaatcagccaactgacgtgacgtctaagaaggaagtgccaaat
ggagtaaccacgtgggacttcaatgatctgggagcgagagcgtcctgcagctgctccagg
ttgaagcagcagaagctgaatctgaccaccacatccactgccaacccccagactagtgcc
aaccccactcagtcctctggcccgtcattataccctccctccctgcccaaacacaagacc
agtgacaagacagaaaaggctgacaaacagtccaagaggccagccacaatccccttccac
caccgtctatctgtcacacaggagacccatctggaacaggactcaccaggagggccccag
ctcgggggtcttgtggccctggagccacccttggagcctctggccgctctgccaagctgc
aagtatcccaaacccctctccaatggtagaaaagcccctgagtcccttctccattcgccg
atgtctccacttccacccacgctcagcccacacccaagagacccggaggtcctggatggg
cctgtggatatgcccgtctgtccggatggggcttcagggctggggatgattaccagtgag
acagctgtgtatgcagctctgctgaggcagagggagaatggggccggctggtggagaggc
ttcaggactcccaggactgataagactgacttcagacccccagaactccccactggtaaa
ttagaggacgtgaggacagagacagtcactgagggagctccgctaaagagactatacaca
cagactcctaagagatttaaaatctcagaggagagggttagggaccacatccacactttg
ggcctgttccagcagccaggtgtagaggcactgcgggagcccggtgatgatccatacgac
tttaaggaaggagacattgagtacactttctccacttccaagaggttaaagagtcaaggg
cgagaacccagcaaaaaggtcaagggagaagaaatcaccagcaatggagcactgcctgat
gggaaagatgctatgtccatttttaactcggctccaaaatcagatgaatcaagtcaggat
gacgcagctgccaaagccaatccttctctgaccagagaaaaagatctagtggtcaacatc
tctgatctagacaacatatttgatgaagacgaggaagagttggggactgtttaccccaac
cagcactcaaccaagctaccagtatcaacagaagatcgccctctggggaaagaagggaga
gttgcagtaccttatccatcaacagtagcagacctgcagcggatgtttcccaccccacct
tctttagagcagcacccagccttctctcccatcatgacatatcgtgacactccgagtcaa
gagccccctgcgcccagcggagcggctgaccatctgccgcctttagcctccacccagttt
actgaatacaggatggagtttgaggaggatgtggccagtctcaggcaggaggatatcaag
ccacaaataggctcctccatgtttgctccactatcctgcctacccagccagagtctacca
cctctcaagatacccgagcaatgctactatcgtccatcctgggccctcatgcccaaaatg
gagcatttccctacggtcatgcatccccagaataacactttcattagagacggatacaca
aacatccccagtgtcaacaccctcacggaccaggagtacggccagatgagcgccaccact
gcctccgtgagcaccactgttggcatcctcccttctcctgccactccccgcttctctgtg
cccactccacgaacccctcgtacaccacggggtattaacgctgcaagctctgggcagggt
tcggtgaagcaggatggtactgagctcagctcaccggtctccacgccctccaccagcctg
cctcttagctctgtagagcccctagctcggccaggaccctccctgcctgaggcccacagc
ctgtatgctgtcctcctgctctcagactccgtcctcaatgtcttcaaggatcgcaacttt
gacagctgctgtatctgtgcctgcaatatgaatgtcaaaggagcagatgtgggggtgtat
atccctgattccacttgtgaagatcagtaccgctgtatgtgtggcttcagtgccattgtg
aacaggctgctggcccatggcacaggcctcttcctggaggatgagctggatatttacggt
cggacttctgaggtaggccgggccgcagagaggaggctggctctttgccggagggaccca
actatgggagaccccagggccaagaggccgcaggacgtagcccctgcctctccgttagtc
atggtccttctgcaggaacagtgctcccagcccatttcttccctggcatcactgcatctc
cccctcagctgttcctgccatggccgcaagggggcactgctccaaagctggatgtctgaa
aagcagtgggcagatgggagtgatgcctgtgtggagtgttacaatgccttggaacagggg
ctgcagtatgtggataaccccacaggagggaaagtagatccagctattgtcagaagttcc
gctcttcactcctggcctcacacgaatgtggtggacatgagcatgctgtcgtcccaggat
atggttcgtatgctgctgtctctgcagcctttcctgcaggatgccatccagaagaagaga
acaggacggacctgggaaaacatccagcatgttcagggtccactcacctggcagcagttc
cataaaatggctgggagaggctcctacggttcagaggagtcgccagagcccttgcccatc
cctacagtgttactgggctatgaccgggacagggacttcttggcattgtcccctttggca
ttacctttctgggagaagctgctgctggagccttatggggggcagcgggatgtggcgtat
gtggtgctgtgtcccaacagcccctctctgctggcagcagcccgagccttcttccaggag
ctcagcactgtttacgagacgtgccgccttgggaagcaccgtcctctggccaaggtgtcc
agggatggccttgtgcgtgtgggggaagaagtggagccagaaaagctggaggagctggct
gtggaccagtggttgactggaccctgggctggacagcagcacgccgacaacctcagcaaa
cttaaactctacgcttatgcctgcaagcaacatcttggcccccagctgtcagccctgcct
ttggacagcagtcttctgttgcctcccaaagtccagcctcccttaaaccccacatcctca
gcccagcctgcctcttctgggcagcctcaagcttggggccctgatggtgaacaagctcca
ggggctgccagtacaggaaacgctccgaccccgagtggagcaacctcaaaccagatgggg
gagacaacccaaggagcaaccagcgattctaaagggccttccagtgccacaccaccagcc
aacacaccagcagaaaaccctgaactcactcctgagcagtctagaatcggcatccccact
gtggccgactcaatggagagccacgccaacccaccagctattgttatttacatagtggat
gcttttcttagctcaagtggagcaagaaatgaagggggagaggaagaagagggtggcgac
gtggaggcaggtagcatttggctattaggacttcttcgctgctacacagagatgctacag
actttgcctgagacgataagacctgcactggtgctacaggtggtgccatgccagtacctt
cttcagccagccagtggggagaaccatttgtacctgcaacatctgcgctccctggccttc
tcctgttactcccaatgcagacgtctgctgccccagcaaatacacatcaagtccctgact
ggctttggaccagtgtccactgtcaattctgtacttaagagtccagagcatcccagccca
ctgcagctatactgtccccccttcatccttggtccgacccgtcccaagcagccagagcca
ggggagatatgggccgagctcccgcccaaatacaatgtgctctttgttggatactgccta
tcgcatgaccagcgctggatactggtgtcctgcactgaccagcagggggagctcctggag
acttgcattatcaacattgatgtacccaacagagcgcggcgtcccaaggtttcagccagg
aggatgggtctacagaagctgtgggaatggtgtattggcatcatccagatgacctcactg
ccatggaggattgtgattggtcgattaggccgactggggcatggggagttaaaagactgg
agctcactccttggggagcattcccttcattcaatagggcgccagctgaaggaggcttgt
cgtatttgtgggatctcagctgctgactcccccactatcctcagcgcctgcctggtagcc
atggagccacagggctcctttgtggtcatgcctgatgcagtgaccatgggctcagtgttt
ggccgcagcactgctctgaacttgcagacctcgcagctgaacacacctcaggatgcttcc
tgtacacacattctagtcttcccaacttctgccaccacccagctggcacccagctcctac
cccactgaggacaataatgatgacatgttcgatctgccctttcctgatgaactggagaat
gacattggccatgacatgatgctgatcacagggaacctccacccttcccctaacacttct
cctgtgccctcgcctggctctccgtccgggatgggaatgggatcacatttccagcacacc
aagaaccagggagagcgcttgctgtccagggacagtccaccagaagagttgaagcagcag
ccgctggctctgggctactacgtctccactgcacaagcaaatggacttcctcactggttc
tgggcctcctgcccacaggctgagagccagtgtccactcttcctcaaggcctccctccac
caccacatctccatagcccagtcagatgagctggtgtcagacaagactaagagaacccct
caccccttagactcaaagaccacctctgatgtgctcaggtttgtattggaacagtacaac
gccctctcctggctgacatgtacccctgccacccaagaccgccagtcctgcctgcctgtc
cacttggctgtactgatccaaatgtacaatgccatcctgaacatgctttag
DBGET
integrated database retrieval system
