Siniperca chuatsi (mandarin fish): 122866123
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Entry
122866123 CDS
T08948
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122866123 (arhgef28a)
Membrane trafficking [BR:
schu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122866123 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
PHD
PH_13
SOS1_NGEF_PH
C1_2
Prok-RING_1
DUF7588
DUF2205
PHD_4
Motif
Other DBs
NCBI-GeneID:
122866123
NCBI-ProteinID:
XP_044031287
LinkDB
All DBs
Position
LG18:6135882..6178392
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AA seq
1797 aa
AA seq
DB search
MVDGKKMEVNRREVPLYGQVEAHVRLQANPPEDAEFYVVVQGSRLTHVTAAKTGDDGLTL
CFIVPGHALVEVVSVTSYFYAEDQVKPCEGEASLEYLRDVAQEAAEYLSTNRDQLGPQSY
LEILKRFSTWAQAADEELSVVGLDRNEEDVQLRQRSGAEAGLRQLDEKITQAMANMDYPQ
QWKNTDSQPREASELQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTLPNQEGDTPLQL
AQKSRQHAMFRVLAAPPGPVVGPVPGVWCVWSDSSCMLRFCPGTDSLTLTVRQTPGSSPQ
DGIMIFRDRLGDQGILKLINELKADCEVDKRGKDELPPSDEGISKELRVEENAVVDNVFE
EQLVLSLDDDVEEYPSSLSVNEHLMQCSGDQSQFTQRATDPLLSMINSSDQTITQRTQAE
DADIKYSTSIVHGVTRDSTETDGGLWNTMDSEDLLLATDTPPPNSEDFYPPSEPCSSPLS
PADQALARLNSLASSEPTNQRESPPMDICDLSPSLVALEVDSEEDSTEPKSPLSPLSSDV
EKNEDKRETFRPSPDLICTLTQSASSACEPIMKELDDQGLRLRSYSYSSPKISLRPVRFA
RDNHTSDISPDAVLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSLSEQSHEKREIRFRK
RAQSADDEGSMELAESLQHLTLSEFLKEIEEEELDKYNIPTKVESEKYKVIRTFSFLKSR
MSSTRNKTKGKGKDREAKDRQLNGHRFNTGSCLGPTVCVVCEKPASGKDLLHCSSCTAIV
HKGCKESVPPCLKKLQDKYAVTMVKDRTASLPQNFTVRDSPPQCVIPISTSLPVMTPKER
KDTAIQSCPLSGSFPNSDSSRLSESSETESDAWKVTSRSEELLPTPMSSTSTDSSFGEDC
VDAYIHSDMSVDAVDYEAESWSLTVEHKFCKKQDKRAVKRQDVIYELMQTELHHLQTLHI
MAEVFRRGMKEEVQLDTEAVERVFPCLDQLLLFHHGFFAAMKERRQSSAQPQGHRNYLIQ
RIGDVLLQQFSDENREKMKQVYGDFCSRHNEAVSFFKELQQHNKRFQNFIKQQGNNYLVR
RREIPECILLVTQRITKYPVLLERILQYTQEETDEHVDISKALVQIREVIAAVDMSVSKY
ERHQRLQEVWNRMENRSAAKLKNGLTFRKQDMMGPGQTLKHQGLLLWKTATGRLKDVLAL
LLIDTLVFLQEKDQKYTFATVDQKPPVIALQKLIVREVANEERGMFLISASAAGPEMYEV
HTSSKEERNTWMRLIREAVESCPEEEEEYTSESEEEKRAAEARIQKIHKLQESLMSQDQR
ICSSLEEKLQVYAELSALRGNMHASLMEPRLLVQPQSEELPQAAVLLAAALQEAENLRAT
LSSNTCSPLSHSADSDTDSVFPVSPASLLQPPSDSEASPENPEASEGGWTEALVLQSQTL
LQTTDTNDVDLKVAQSVQSLTQLLYSLQATVTIQDSCYEVQRLLLQETGRPSPRAQRPHL
PSIRGNTLQEQEKQRNLEKRKEEVAAAQRLQGQLRQEKERWERECQARDSQQGEQESRLE
ERERQCHLEAERLRREREELNEQLEEYQQSLERLREGQRNVERERERLENQQKLLQTWRH
SQQRSLPTVPTVIPHMVIPLDGQQDSAPSQSRDHAGNGSVFVNEAAFASTSVNNRHVHHK
RNDPRAHNCLNTLLARSNSRQPPIAKTPHNLHSDAQGWVMETGYLLSPAGRLGLQHTPSD
HNSHSYIGETWSSTARGADPYPVVPHPGDPQLDLSPLVSLETHSGGEEGSEETIVYL
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggtggatggaaagaaaatggaggtgaacagaagagaggtgcctctatatggacaggtg
gaggcccatgtaaggttacaagccaaccctcctgaagacgcagagttttatgttgttgta
caaggctctagacttacacatgtgactgcagcaaaaacaggagatgatgggttgaccctt
tgcttcatagttccaggccatgcccttgtggaagttgtctctgtcacatcctacttttac
gcagaggaccaagtcaagccatgcgagggtgaagcatctcttgaatacctcagggacgtt
gcccaggaagcagcagaatacctgagtaccaacagggaccagcttggcccccagagctac
ctagaaatcctgaagaggttttccacgtgggcgcaggcagctgacgaggagctctctgtt
gtagggttagaccgcaatgaggaggatgtgcagctcagacaaaggtcaggtgctgaagct
ggtctcaggcagctggatgagaagatcacacaggctatggccaacatggattaccctcag
cagtggaaaaacactgacagtcaacctagagaagcttctgagcttcagcccaaagaaacc
ctccttcaccttgcagtgcgtttgggtttggtccatctctcccgtttcttaattcaccaa
ccgagaggtcaaagggcattgaccttacccaatcaggagggagacacaccccttcagctg
gctcagaagagcagacagcatgccatgttcagggtgctggcagctcctccaggtcctgta
gtcggccctgttccaggtgtgtggtgtgtgtggtccgacagctcctgcatgctgaggttt
tgccccgggacggactccctgaccctgactgtgcggcagacacccggcagcagccctcag
gatggcatcatgatcttccgagacagactgggagaccaaggcatcctcaaactgatcaat
gagctcaaagctgattgtgaggtagacaagagaggcaaagatgaattacctcctagtgat
gaaggcattagcaaggagctccgagtggaagagaacgcggtggtggacaatgtttttgaa
gaacagcttgttctgtctttggatgacgatgtagaagagtacccatcctcattatctgta
aatgagcatctgatgcagtgcagtggagaccagagccagttcacccagcgtgctacagac
cctctgctctccatgatcaacagcagcgatcagaccatcacacagcggacacaggcggaa
gatgcagacatcaagtatagtacaagtatagtccatggagtgaccagggacagcacagaa
acagacggcgggttatggaacacgatggactcagaagatctcctgctagccactgacact
cctccacccaattcagaagatttctaccctccctctgaaccctgctcttccccactttca
cctgctgaccaggccctggccaggctgaactctcttgcctcctctgagccgaccaatcag
agagaaagtccgcccatggacatctgcgacctcagtcccagtctagtggctctggaagtg
gacagtgaagaggacagcactgagccaaagtctccgctttccccgctctcgtcagatgtg
gagaaaaatgaagacaaaagggaaacctttcgtccctcccctgaccttatttgcactctc
acccagtctgcctcctcagcatgtgaacccatcatgaaagaattggatgaccaggggctt
cgactgcgttcgtattcctactcttcccccaaaattagtttgcgtcctgttcgttttgct
cgggacaaccacacttcagatatcagccctgatgccgtgctccacagtgtcagccacagc
cgatctctccttcaggccctctctctgtctaaatctctgtctctgctccaccctggtaag
caaagagcctccagtctatcagagcagtcacatgaaaaacgggagattaggttccgtaag
cgtgcacagtctgctgatgatgagggcagcatggagctggcagagtccctccagcatctc
actctgtccgagttcctcaaagaaattgaagaggaggagttggacaagtacaacatccca
acaaaggtggagtcagagaagtacaaagtcattcgtaccttcagttttctcaagagcagg
atgtcgagtacacgcaacaagaccaaggggaaggggaaggacagagaggccaaggatagg
cagctgaatggacatcggtttaacacaggctcctgtttaggccccaccgtgtgtgtggtg
tgtgagaaaccagcctctggaaaggacctgctgcattgctccagttgcactgctatcgtc
cataagggctgtaaggaatctgtccccccatgtttgaagaaacttcaggataagtatgcg
gttaccatggtgaaggacaggacagcatccctcccacagaatttcacagtgagagacagt
cctcctcagtgtgtgatccccatctctacctctctacctgtcatgacccctaaggagagg
aaagacactgcgatccagtcatgccccctctctgggagtttcccaaacagtgacagcagt
cggctcagtgagagttcagagacagagtctgatgcctggaaggtgaccagccgatcagaa
gagctcctgccgactccaatgtcctccacctccactgactcatccttcggggaagactgt
gtggacgcgtatatccacagtgacatgtcggttgatgctgtggattacgaggctgagtcg
tggagtctgacagtagagcacaagttctgcaagaagcaggacaaacgagctgtcaagagg
caggacgttatctatgagctgatgcagactgagcttcaccacctacagacactacacatc
atggccgaggttttccgtcgaggtatgaaggaggaagtgcagctagatacagaagcggtg
gagcgggtcttcccctgtctggaccagctgcttctcttccaccacggcttctttgctgcc
atgaaggagcggcgacagagctcagcccagccccagggacacaggaactacctcatccag
cgaataggagacgtcttgctccaacagttttcagatgagaatagagagaaaatgaagcag
gtatatggagatttctgcagtcgtcacaacgaagcggtcagctttttcaaagagctccag
cagcataacaagagatttcagaacttcattaagcaacaaggtaataattatttggtgaga
cggagggaaatcccagagtgcatcttgctggtaactcaaaggattacaaagtacccagtg
ctgctggagaggatcctacaatatactcaagaggaaacagatgagcatgtcgacatttcg
aaagcactggttcagattcgagaggtgatagcagccgtggacatgagtgtcagtaaatat
gagcggcatcagaggttacaggaagtgtggaaccgcatggagaatcgcagcgcagccaag
ctgaagaatggcctcaccttccgcaagcaggacatgatggggccgggacaaacgctcaaa
caccagggcctgcttctgtggaagaccgccactggtcgactcaaagatgtcctggcgctc
cttctcatagatacactcgtattcctgcaagaaaaagaccagaagtatacgtttgccact
gtggatcagaagcctccagtcatcgcactgcagaagttaatagtgcgagaagtagcaaat
gaagagagagggatgtttttgatcagtgcatcggccgctgggccagaaatgtacgaggtc
cacacgtcatccaaagaggagcgaaacacctggatgaggctcattagagaggctgtagag
agctgtccggaggaagaagaggaatacacaagtgaatctgaagaggagaagcgagctgct
gaggctcgtattcagaagatccataagttacaagagagtctgatgagccaggaccagcgg
atctgctcgagcctggaggagaagctgcaggtctacgcagagctctctgctctgagaggg
aacatgcacgcttcgctgatggaaccgcgactgctcgtccagccgcagtcagaggagctg
ccccaggctgccgtgttgctggctgcagctctgcaagaggctgagaatctgagagccacg
ctgtcatccaatacctgttctccattgagtcacagcgcggactctgacacagactctgtg
tttcctgtcagccctgcttcacttctacagcccccctcagactctgaggcctcacctgaa
aaccctgaggccagtgaggggggttggactgaggcccttgtgcttcagtcccaaactctc
ttgcaaacaacagacacaaatgatgtcgacttgaaggttgctcaaagtgtccaaagcctg
acccagttactctacagtctgcaggccacggtgaccatccaggacagctgctatgaggtc
cagaggcttctcctccaagagactgggcgcccttccccccgcgcccagcgaccgcacctt
ccaagcatccggggcaacaccctacaagaacaggagaagcagcgtaacctggaaaagcgg
aaggaggaggtggcggcggctcagcggctccagggccaactgcgccaagagaaggaacgc
tgggagagggagtgccaggccagggacagccagcagggggagcaggagagcaggctcgag
gagagggagaggcagtgccacctggaggcggagaggctgaggcgcgagagggaagagttg
aatgagcagctggaggagtaccagcagagcttggagcggctcagggagggccaaaggaat
gtggagagggagcgcgagcggctagagaaccagcaaaagttgctccagacctggaggcac
agccagcagaggagtctacccactgtgcccactgtgattcctcacatggtcatccctcta
gatgggcagcaggactcggcaccaagccagtccagagaccacgctggtaacggctccgtg
tttgtgaatgaggctgcgttcgccagcaccagcgtcaacaaccgccacgtccaccacaaa
agaaacgaccccagggcacacaattgtctcaacaccctgctggcaagatccaacagcaga
cagccccccatagctaagactccccacaatctacactcagatgctcagggatgggtgatg
gagacaggatatctcttgagccctgcaggaaggcttggactgcagcacacacccagtgat
cataacagtcacagctacatcggggagacctggtcgtcgacagcaagaggagctgacccg
tatccggtggtcccgcatcccggtgaccctcagctggacctcagtccactggtttccttg
gagactcacagtggtggggaggagggcagtgaggaaaccattgtgtacctctga
DBGET
integrated database retrieval system
