Siniperca chuatsi (mandarin fish): 122866321
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Entry
122866321 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04217
Necroptosis
schu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122866321
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122866321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122866321
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122866321
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122866321
Multi subunit type E3
LUBAC complex
122866321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
ANCHR-like_BBOX
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
122866321
NCBI-ProteinID:
XP_044031747
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All DBs
Position
LG19:23196986..23221846
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AA seq
1112 aa
AA seq
DB search
MSSNPASVQMDEVRRRFQSLLTSSGSAQDVKAEVQTMASIPLPLSEKYRHFGAEAMLREN
AAGHNRQEVLESLSRLVKALSILEKYGCNLTSPVRPRYWRSVKHNNPVFRTTVDAVKGGR
RVLYLYGYTNQQIDGLSFPDEVSEPDTEMVAAVTLEVMTLRTEVDMLIKGIHPHLEYFKD
IIPFIIQQDKLESDAVVILAGEEQQGDKPQVLSVPPKPTQSPGGQPLKPSTGSPAARDCN
LCGGPSSLVCPSCDNQPFCDACDDLFHRHPSRASHKRDKIQKTKQETCSICGISSVQAQC
STCVQRLCLNCDMLFHSHPDRKGHNRTSITPAKTSSPSLSPWECAHCTTVNEMRAVLCTT
CERPRLATAASTVQESLTSVPTSPNTEWQCKSCTVVNQGSSILCEVCERPRLATRPPVAP
ALSSPGSLSETKWMCQFCTYVNTKPTLVCEMCNLSCKDDSAAVSLPQSLQQPLSSTKDQP
QPGVRPQPKPRINLELKRQNMMREDGLILIQQIREAEKCGVSPEEVYAAILCGGNNTKPC
DWLTSELPHLLDEICAMAASVQLNYKAGDSGTQPVVERDGEESEQSGPNVTGEGVKLSRA
EAKLAWLAAGGDTDRAVRQLLRDRQVKMRELHSLGFRDVSQCEEALRLSGGEVKGALSLL
QRPLLEPFHQRIWTHLPEPPIDPKHPDKQRMCRRLLALYDLPSWGRCELVLSLLQEPDVT
YSLEDVVQAVKESHDKDFIRRLLNNECPCCLCIFPRSKMQSLTSCQCSVCHECFGQHFTI
AVRDKHIRDMVCPVCSEPDINDPEQLDSYFSTLDIQLRVCLELDVYDLFHKKLTEHALMK
DPKFLWCCHCTSGFINDGDQLKVTCPSCRKSFCAQCKKPWEPQHQDLSCEQFQQWKREND
PEYQRQGLAGYLRDNGITCPHCRFQYALTKGGCMHFSCSQCRYQFCSGCNNPYHKTICKT
AQCSYSGLHAHHPRDCLFYLRDWEPPRLQALLQRSGVEFNTDPSNGTQTDACCVMEQKDE
GGQQTDSPCGIQTQPGQAGLCEKHYREYLVSLINAHSLDPAPLYDAQEVIRACERYQVDT
QRGENEDDSAYQARMLKKLMEVPLGEKVPRNK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaccctgcgtctgtccagatggacgaggtcaggaggagattccagtccctc
ctcacctcctcgggttcagcccaggatgtgaaggccgaggtccagaccatggccagcatc
cccctgcctctgtcggagaagtaccgtcactttggagcggaggccatgctgagggagaac
gcggccggccacaacagacaggaggttctggagtctttgagtagactggtcaaggccttg
agcatcctggagaagtacggctgtaacctgacgagtcccgtccgacccagatactggagg
agcgtcaagcacaacaaccccgtcttcagaacgacagtggacgccgtcaagggagggcgg
agagtcctctatctgtacggttacaccaatcagcagatagacggcctcagtttccccgat
gaagtctctgaaccggacactgaaatggttgctgcagtgacgctggaggtcatgacctta
cgcacagaggtggacatgctcattaagggcatccatcctcacctagaatacttcaaagat
atcatcccatttatcatccagcaggataagctggagagtgatgctgtggttatcctggct
ggagaggagcagcagggagacaaaccccaggttctttctgttccacctaaacccactcag
agccccggaggacaacctttgaaaccatcaacaggctctcctgcagcgagggactgtaat
ttgtgcggtggcccttcgtctctggtttgcccatcttgtgacaatcaacctttctgtgac
gcatgcgatgacctctttcaccgccacccctcccgggccagtcacaagagagataaaata
cagaaaaccaaacaagagacctgcagcatctgtgggatttcttctgtgcaggctcagtgc
tccacttgtgttcagaggttgtgtctgaactgtgacatgcttttccactctcaccctgac
cgcaaaggacataacagaactagtattacaccagccaaaacatccagtccatctctgtca
ccttgggagtgtgctcactgcactacagtgaacgagatgcgagccgtcctctgtacgacc
tgcgaacggcctcgactcgccacggctgcatccactgttcaagaaagcctgacgtcagtt
cctacatcacccaacacagagtggcagtgtaagagctgtacagttgttaatcaaggcagc
agcatcctctgtgaggtgtgtgagcgcccgcgtctggccactcgcccacctgtcgcacca
gcgctgtccagcccaggatctctgtctgaaacaaagtggatgtgccagttctgcacctat
gtaaacaccaagcccactctggtgtgtgagatgtgcaacctgtcatgtaaagacgactct
gctgcagtttctctgccccagtccctccagcagcctctgtccagcactaaagatcaaccc
cagccgggtgtgaggccccaaccgaagcccagaatcaacctggagctgaaaagacagaat
atgatgagggaagacggcctcattctcatccaacagatcagagaagcagaaaagtgtggc
gtcagtcctgaggaggtgtacgcagccatcttgtgtggcggcaacaacactaaaccctgt
gattggctgacatcagagctgcctcacctgctggatgaaatctgcgccatggcggcttct
gtccagttaaactacaaagcaggggattctgggacacaacctgtggtggagagggacgga
gaggagtctgagcagagcggtcctaatgtcacaggtgaaggtgtgaagctgtccagagct
gaggccaagctggcctggttggcagcaggaggagacacagacagagctgtgagacagctg
ctgagagacagacaggtcaagatgagggagctgcactctctgggctttagagacgtgtcg
cagtgtgaggaggccctgcggctgagtggaggagaggtgaagggggctttgtctctgctt
cagcgccctctcctggagcccttccaccagcgtatctggacccacctcccggagccaccg
atcgatcccaaacacccggacaaacagaggatgtgcaggcgtctgctggcgctgtacgat
ctgcccagctgggggcgctgcgagctcgtcctctccttgcttcaagagccagacgtcacc
tactctctggaggacgtggtgcaagctgtgaaagagtcgcacgacaaagatttcatcagg
cggctcctcaacaacgagtgcccctgctgtctgtgcatcttcccccgcagcaagatgcag
tctctgacttcctgtcagtgctccgtgtgccacgagtgcttcgggcagcacttcaccatc
gccgtgagagacaaacacatccgagacatggtgtgtcccgtctgcagcgagccggacatc
aacgaccccgaacaactagacagctacttttccacgctggacatacagctgcgtgtctgc
ctggagctggacgtgtacgacctgtttcataaaaagctgactgagcacgctctcatgaaa
gacccgaagttcctgtggtgctgtcactgcacctctgggtttatcaatgatggagaccag
ctgaaggtcacctgcccgtcttgccgcaagagtttttgtgctcagtgcaagaaaccttgg
gagcctcagcaccaggatctgtcctgtgagcagttccagcagtggaagagggagaacgat
ccagagtaccagaggcagggcctggccggctacctgagagacaacggcatcacctgtcct
cactgcaggttccagtacgctctgacgaaaggcggctgcatgcacttcagctgctcccag
tgcaggtaccagttctgcagcggctgcaacaacccctaccacaagacgatatgtaagacg
gcccagtgcagttacagcggtctacatgctcatcaccctcgcgactgtctcttctatctc
agagactgggagccgcccagactgcaggccctgctgcagaggagcggtgtggagttcaac
acagatccttctaatggaactcaaactgacgcttgttgtgtgatggagcagaaagatgaa
ggcggtcagcagactgattcaccgtgtggcatccaaacacaaccgggacaagctggactc
tgcgagaagcactacagggagtacctggtgagtctgattaacgctcactctctggacccc
gctccgctctacgacgcccaggaggtgattcgggcctgtgagaggtaccaggtggacacg
cagagaggagagaacgaggatgatagcgcttaccaagctcgaatgctcaagaaactgatg
gaggtccctctgggagaaaaagttcctcgaaacaaataa
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integrated database retrieval system
