Siniperca chuatsi (mandarin fish): 122866342
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Entry
122866342 CDS
T08948
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122866342 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122866342 (smarcd3b)
03036 Chromosome and associated proteins [BR:
schu03036
]
122866342 (smarcd3b)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122866342 (smarcd3b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122866342 (smarcd3b)
PBAF complex
122866342 (smarcd3b)
GBAF(ncBAF) complex
122866342 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-GeneID:
122866342
NCBI-ProteinID:
XP_044031798
LinkDB
All DBs
Position
LG19:18881678..18922533
Genome browser
AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRTRKKPVGFPGANEMPTRQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
PRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtccggagcgaggatgccccaccaggga
gctccaatgggcccccccggcccaccgtacggggggagcccggcggtgcggcccggcctg
ccctccccggtgatggagcccagtcgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcagcagcaacagcagcagcagcagcaggccgtccagaaccggaccagaaag
aagccagtcggattccccggagccaatgagatgccgacgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgtgagctggtccccgagtctcaggcctatatggatctgctggcg
tttgagcgcaaactggaccagaccatcatgcgcaaacgtgtggacatccaggaagcactg
aagagaccaatgaagcagcaaaagcgtaaactgagactttacatatccaacaccttcaac
cctgccagacctgacgctgatgactcagatggcagcattgcatcgtgggaactgcgagtt
gaggggaagttgctggatgacccggggaagcagaagaagaagttctcttcgttctttaag
agcctggtgatcgagctggacaaagacctctacggcccagacaaccacctggttgagtgg
caccgcacgcccaccacccaggagacagacggcttccaggtgaaaaggccgggagacgtg
agcgtgcgctgcactctgctgctgatgctggactaccagcctccccagtttaagctggac
cctcgcctggctcgcctgcttggcattcacactcagacccgctcctgcatcatccaggcc
ctctggcagtacgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaac
tgtgacaagtacttccagcagatttttgactgccctcggctgaagttctctgagatccct
cagcgcctcaccaacctcctcttgccccctgaccccatcgtcatcaaccatgttatcagc
gtggatcccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggaagac
cccctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatcgcc
tcgctcgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccagagg
gacttcatgctcagtttctccagagatcccaagggctacatccaggactggctcaaatcc
cagagccgagaccttaagttaatgacagacgtggtggggaaccctgaagaggagaggagg
gcagcgttttaccacgagccctggtcccaggaggcggtcagccgctatttctactgcaaa
atccagcagaggagacaggagctggaacaggccttagctgtgcgcaacacctaa
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