Siniperca chuatsi (mandarin fish): 122866367
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Entry
122866367 CDS
T08948
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122866367 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122866367 (prpf4bb)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122866367 (prpf4bb)
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
122866367 (prpf4bb)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122866367 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
122866367
NCBI-ProteinID:
XP_044031883
LinkDB
All DBs
Position
LG19:complement(19405246..19415338)
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AA seq
1017 aa
AA seq
DB search
MADVEMDIASSRMNNGNEHVKQDLESHERSGNEDSGDMSEEEEEEEEEAVTNGGEKTEQG
SKHHSSSGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEGSSPSGAVLFG
SSSHRKVETSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNS
GSEEDGDARIRNGEQRQRGSSGKPISPRGGKSGKSRRDSTEGSKSSVRRRSRSKSADRLV
QAKESKQDKVTKTTKDTGVKDRGRGRSRSKDRKRSDSTDRSKERTRKSNSPSSWRGEQKG
SRTDKRTSPPRDDRPNQERTSRRSRSPGRERPSRSDADREKRPAKSPSKDASSGKENRSP
HRRGPQSPMRKRSASPRHRDAHHPSASASDRTSKPSHSPSRTRSPPRRGRSPDVRRRDAD
RQDSPLRKRPRADAGPGRDRSRENSPRSSYRGRMSRSPLRRRSPSPRRRSRSSPRRRSPL
GHRSGERDRYGRPRQYRRSVSRDRERRRRRSRDEDKFKGSLSEGMKVDQESSEEEVLEDF
DGEEVDEEALIEQRRQQRMAIVQKYKVGNEDTNMVSEPSSPQSSTRSRSPSPDDILERVA
ADVKEYERENLNTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAADFDSARMR
AAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARA
GQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPL
SMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTIL
KLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILFP
GSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTIN
PTKDLLTDMIGGQRLPEDQRKKVMQLKDLLDSTLMLDPAKRISINQALQHPFIQEKI
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagagatggacatcgcgtccagcagaatgaataatgggaacgaacacgtg
aagcaggatctggaaagccatgaaagaagtggaaatgaggacagcggagacatgtctgag
gaagaagaggaggaagaggaggaggcagtgactaatggtggtgagaagacagaacagggg
tccaaacatcacagcagcagcggtaaacacaagaggaaaaaacacaagcatcgtagtaag
cacaaaaaacacaagcatgcctctgatgaggacaaggaccgcaaacgcaagcatcgtcac
aaacacaggaaacacaaacgcaaagagggctcctctccctctggtgctgtcctctttggc
tcctctagccacagaaaagttgagacctccccttcctctggaaatccaagtcttgacgac
agggccctgttggaggatttagagaaacagagggccatgatcaaagctgagctggatagc
cagttgatggagggcaaggttcagtcaggcatgggcttaattcttcagggttataactct
ggatccgaagaggatggagatgctaggatcagaaatggagaacagcgtcaaaggggcagc
tcaggtaaacccatatctcccagagggggaaagagtgggaaatctagacgggactcaaca
gagggcagtaagtccagcgtcaggcgtcgtagtcggagtaagtctgcggacaggctagta
caggccaaggagtctaagcaggacaaggtgaccaaaaccaccaaggacacaggtgttaaa
gacagaggccgcggcagaagcaggtcaaaagaccgaaagcgttcggacagcactgacagg
tccaaggagagaaccaggaagtccaactccccctccagctggagaggagagcagaaaggc
agccgcactgataaacgtacctctccaccgcgggatgacagaccaaatcaggagagaacg
agcagacgctccagatcacctggacgagaacggccaagtcgctcagatgctgacagggaa
aagcgaccagccaagtccccatccaaggacgcgtcatctgggaaagagaatcgctcccct
catagacgagggcctcaaagccccatgaggaaacgcagtgcttcccctcgccacagagat
gcccatcacccctcggctagtgcctcagacaggacatcgaaaccgagccactcaccatcc
agaacaaggtccccccccaggagaggccgctcgccagacgtcaggaggagggatgctgac
aggcaggactcaccactgaggaagcgtccccgggcagatgcagggccaggcagagataga
tcaagagagaacagtcccagatcgtcctatcgaggcaggatgagtcgctcacctctaaga
cgcaggtccccatctccacgacgacgctcccgctcttccccccgcagacggtctccactg
ggacacaggtctggggagagagacaggtatggcaggcccaggcagtaccgacgctcagtg
tcccgcgatcgggagaggagaagaagacgcagcagagatgaggacaagttcaagggcagc
ctttcagagggcatgaaagttgaccaggaatcctcagaggaagaagtgttagaggacttt
gatggagaggaggtagatgaagaggctctcattgaacagcgccgccagcagcgcatggcc
attgtccagaaatacaaggttgggaatgaggacaccaacatggtgtcagagcccagcagc
cctcagagcagcacacgcagccgttcaccctcacctgatgatatcttagagcgagtagcc
gcagatgtcaaggagtatgaacgcgagaacctcaacacctttgaggccagcatcaaagcc
aagcacaacctcatcgcccaggagaaagacggagccaacccaaagaagccgtcagccccc
gacatgtttacagagtcagatgacatgtttgctgctgactttgatagtgccaggatgaga
gcagcaggtgtagggaaggacttcaaagagaaccccaacctcagggacaactggactgat
gctgagggttactaccgagtgaatattggggagacgctggacaagcgctatgatgtgtat
ggctacactggccagggtgtattcagcaatgtgatcagagccagggacactgccagggcc
ggccaggaggtggcagtcaagatcatccgaaacaatgagctcatgcaaaagaccggtttg
aaagagttagaattcctcaagaagctgaatgacgcagatcctgatgacaagttccactgc
cttcgcctcttcaggcacttttaccacaagcagcatctatgtctggtatttgagccactc
agtatgaatttgcgagaggtgttgaagaaatacggtaaagatgttgggctccacatcaag
gctgtgcgttcctacagtcagcagctcttcttggccctcaagctgctcaaacgatgcaac
atcctccatgctgacattaagccagacaatatcctggtgaatgagtcaaagaccattttg
aagctttgtgactttggttctgcatcccatgttgctgacaacgacatcacaccatatctg
gtcagcagattctacagagctccagaaatcatcataggaaagccttatgactatgggatt
gacatgtggtctgttggctgcactttatatgagctttacactggcaaaatcctgtttcct
ggatcttctaacaatcacatgatcaaactagcgatggacctcaagggcaagatgcccaac
aagatgatccgtaaaggcttgttcaaagaccagcacttcgatcagaatttgaacttcctg
tacattgaagtagataaagtgacagaaagggagaaggtgacggtgatgagcaccatcaac
cccaccaaagacctgctgacagacatgataggaggccagcgactgcctgaggaccagagg
aagaaggtgatgcagctgaaggacctgctggatagcaccctgatgctggacccagccaaa
cgcatcagtatcaaccaggctctgcagcacccctttatccaggagaagatctga
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