Siniperca chuatsi (mandarin fish): 122866536
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Entry
122866536 CDS
T08948
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122866536 (trpc1)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122866536 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
122866536
NCBI-ProteinID:
XP_044032226
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Position
LG19:16888742..16903664
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AA seq
796 aa
AA seq
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MHISVWPYSLSVVMAALYQGTESSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHINKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLATFALKIVAHSKFKN
VEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKNPPKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggaatcctcctctccggataaatttctggccttgaaagacgtgagagaggtgaaagag
gaaactacgctggatgagaagctcttcttgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaaccgacacggcgaactcaacatcaactgcgtagacgtg
ctgggccgagatgccgtcaccatcaccattgagaacgagaatctagacatcctgcagctt
cttctggaacatggctgccaggcgacagatgccttgttggtggccatagactctgaggtg
gtgggagctgtggacatcctcctcaaccacaggccgaggagatcatccaagccctccatt
gctaaactgatgcagcggattcagaacccagagtattccaccaccatggacgtggctcca
gtcatcctggcagcccacaggaacaactacgagatcctgacaatgctgctgaaacaggac
atctcgcttccccggccccacgctgtaggctgcgagtgcacgctctgcaacgctaagaac
aagaaggacagcttacgacactccaggttccgcctggacatctaccgctgcctggccagc
ccctctctgatcatgctgactgaagaagatcccatactcagggcctttgagctgagtaca
gacctcaaggagctcagcctggttgaggtggagttcagaaatgactatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggctcaggctcgaaactctcgagagcta
gaagtgattctcaaccacacatccaatgaagatcacattaacaagagaggcttaatggag
gagcgcatgaacctcagtcgactcaaacttgccatcaagtacaatcaaaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacaccgtctggtttggagagacggccagctac
cggcgcaaacacacctgtctaaagatggcaacagtgctgagcgtggcaatgctttggccg
ctgctttctgtctgctaccttctggtgccacgctcccgtgtgggccagatcatccacacg
ccgtttgtcaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctgtactctctggtctacaatgagggcaagaaaaacactatgggccctgcgctggagatg
atagattacctactcatcctctggatcatagggatggtgtggtcggatgtgaagcgcctg
tggtacgaggggctggaagactttctggatgagtctagaaaccagctgagctttgtgatg
aattccctttacctagccacctttgccctcaagatagttgctcatagcaagttcaagaat
gtggaggacacagagaggaagaattgggatgccttccatcccatcttggtggctgagggc
ctgtttgcctttgccaacgttttaagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggccactacagatctccatgggtcagatgctgcaggagtttggaaagttt
ttgggcctcttcctgctggtgttattctccttcaccattggactcacccagctttatgga
aaggaccagaaagacccagacaagaatccacccaaggactgcgagggcatattctgccag
caacagagcaatgatgcattccacacgtttatggggacctgctatgccctgttctggtac
atcttctccctggcacatgttgcgctcttcgtcacccgcatcagctacacagaggagctg
cgctcttttgtgggtgccatgatcataggcacctacaacatcgtggtggttattgtgctg
accaagctgctggtggccatgcttcataaaagcttcagacaaattgctaatcacgaggat
aaggagtggaagtttgctcgtgcaaaactgtggcttagctactttgatgacaagtgtacc
ctgcctccgccattcaatatcctcccctccccaaagactgtctgctacctggtgaccagc
atgagcaagtggatctgttcacacacctcaaagggcaaggtgaagagacagaacagcctc
aaggagtggaagaacctgaagcagaaacgtgatgagaactaccagaagatcatgtgttgt
ctggttcaccgctacttgacctccacgcggcagaagatgcagagcacagaccaggccacg
gtggaaaatctgaacgacctgcgccaagacctctcaaagtttcgcaacgagatgagggac
ctgctgggcttccggacctccaaatatgccatgttctacccaaggagctaa
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