Siniperca chuatsi (mandarin fish): 122866596
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Entry
122866596 CDS
T08948
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
schu04517
IgSF CAM signaling
schu04520
Adherens junction
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122866596
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122866596
09144 Cellular community - eukaryotes
04520 Adherens junction
122866596
04530 Tight junction
122866596
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122866596
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122866596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
122866596
NCBI-ProteinID:
XP_044032379
LinkDB
All DBs
Position
LG19:complement(7568379..7912709)
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AA seq
1392 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHSLIEQAAMRYKKAIAKDPSYWVQVHRLEHGDGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFASDMSSASAFQPYQVN
SEIEVTPSALRSNMPLRVRRSSDPSLADLPPGEVTEEPSRKNPTRWSTTAGFQKYNHKPN
ASTDTGSLERKGRGGHAYRSLPRDASGWTTQFQREMARSSLSANHPMVDQWLDRQEQEQE
EEDGRKQERRIERIEPVGRADSSLEHSPVLSLEGMLKPVEVSNEGGPLGIHVLPFSSQDV
RTQGLLVKRLERAGKAEQEHLFQENDCIVKINQGDIRNLRFEQAQNIFRQAMRCPVILFH
VVPAAMKRQYELLLAQTELSPPQSNRVRFRQDSQQLGDRSSLVGGLMSRSGPQPGLNHNH
QGPLAGSTPEPNQRYATLPHSLVSRTSSVPSPSLQRRISTNPSSSSYLKNKGRRFNIQLK
KGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVSGVDLNGKSQE
EVVALLRATPMGGTVNLLVIRQEDSLLPREVQPEEDDMVLTPDGTQEFMTFEIPLSDSGS
AGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMTNQDA
METLRKSMSVEGNKRGMIQLIVARRVSKNNEEAPGSPPVLERPVNSLLDNHERRISHSLY
ETIEGLDNISTPLTNMIGRTGNYQLSPTVNMPQDDIVMIEDDRPPLLPAHLSDQSSSSSH
DDMGFVGENPVPWIHELPGQNECSLSPDADPDGSFQREGFGRQSMSEKRTKQYENPAELE
IIKTRKSKSMDLVADEINFSTRTNGGSAEQEVGPSLGLKKSSSLESLQTAVAEATLNGEM
NVHRPRSRIVRGRGCNESFRAAIDKSYEKPGVTTAEEENSMETLDEDTEGSSRSGRESMS
TSGDLNVGPGLNGNLSKDDRQKDRDKVGGKEKKKPERDKEREKDKDKNKAKKGVLKGLGE
MFRFGKHRRDERPGDRMERKGSSKSKAEDMQASEEETLRMRLEQERIQAKTREFRERQAK
EREYAEIQDVVSHTFSSDEEHTYAGIGSLDSSVDSSSMEPYNHHYHLPQSPQSPHLPLSL
QENGPPLEALYAQVNKPRNGRPVAPDSSQMAPSNHDRIQRLRNEFQQAKQEEDVDDHRHT
YNFNQSWVSNGTETPSGRHSVTVETQVQKQQQDDRDGFQQAQRQYSSLPRQPRKNPSTVS
QDSWDKVYMSSEGFQTSKENPRYSGSQGSRNGYLGTSSFNARVLLETQELLRQEQRRREQ
EANKARPPPAQETPSGSTYDHNRDHTQAPGSAPMQAPPQSKGPYRQDVPPSPSQLAKLSR
LQGSEKGRLFYS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgtttcgggaggacccgggtggtcgttccgtgtggagatgggaat
ataaaagtccacagccttatcgaacaagcggccatgaggtataagaaggcgatcgcaaag
gaccccagctactgggtccaggtccaccggttggaacatggagatggaggcatactggac
ctggatgacatgctgtgcgatgtggtagatgacaaagataggctggtagcagtatatgaa
gagcaggatcctcacaatggaggtgacggtaccagtgccagctccacaggtacgcagagt
cccgaacccttcgccagtgatatgagttcggcatcagccttccagccctaccaggtcaac
agtgagattgaggtcactccgtctgctctgcgatccaacatgcctctccgtgtccgtcgc
agcagtgatccatccctggccgaccttcctccgggcgaagtcacagaggaaccgtccaga
aagaacccaactcgctggtccacaactgctggcttccaaaagtacaaccacaaaccaaac
gcaagcactgacaccggcagcctggaacgaaagggtagaggaggccatgcctatcggagt
cttcctcgtgatgcgagtggctggaccactcagttccagagagagatggctcgatcttcc
ctcagcgccaaccatccaatggtggaccaatggcttgaccgacaggaacaggagcaggag
gaagaagacggaaggaagcaagaaaggaggattgaacggatcgagccagtggggagggcc
gattcctcattggaacattcacctgtgttaagcctagaaggcatgctaaagccggtcgag
gtgtccaatgaaggagggcccctggggatccacgtactgcctttcagttcgcaggatgtc
aggactcagggcttgctagtgaagcgtctggagcgtgcaggcaaagccgagcaggagcat
ctcttccaggagaacgactgtattgtcaaaattaatcaaggagacattcgcaacctgcgc
ttcgaacaagcccagaacattttcaggcaggcgatgcgttgtccggtcatcctcttccac
gtggtccccgccgccatgaagaggcagtacgagttgcttttggcccagaccgagctcagc
ccgccccagtccaacagagtccgctttagacaagactctcagcagctgggggacaggtcc
agtctggtgggggggctgatgtccagatctggaccacagccaggcctcaatcacaaccac
cagggacccctagcaggaagcaccccagagccaaaccaacggtacgccacgttaccccac
tccttggtctccagaacctcctcagtcccctccccctccctgcagcgcaggattagcaca
aacccgtccagcagctcctacctaaagaacaaaggccgcagattcaacatccagttgaag
aaaggtccagagggtcttgggttcagcatcacatccagagacgtccccattggtggcagt
gctcccatttatgtcaaaaacatccttcctcgaggggccgccatccaagatggccgattg
aaagctggagaccggctgctggaggttagtggagtggacctgaatggtaagagccaggaa
gaggtggtggccctgctccgagccacacccatgggtgggactgtgaacctgttggtgatt
cgccaagaggactccttgctgccccgagaagtgcagccagaggaagatgacatggtgtta
acccccgatggtacacaagagttcatgacctttgagatccctctgagtgactcaggctca
gcaggcctgggggtcagcgtcaaaggtaaccggtccaaggagaaccacgccgacttgggc
atctttgtaaagtccattatcaatggaggtgctgctagtaaggatgggcgcctacgagtc
aatgaccaactcatcgcagtcaacggggagtcgttgcatgggatgaccaaccaggacgca
atggaaacactgcgcaaatccatgtctgtagagggcaacaagcgagggatgattcagctc
atcgtggcccgtcgggtgtccaaaaacaatgaggaagcccctggcagccctccggtttta
gagcgtcccgtgaattctctactggacaaccatgagcgccggatttcccactccctttat
gaaaccatcgaaggcttggacaacatctccacaccgctgactaatatgatcggacgcact
ggtaactaccagctctctccgactgtgaacatgcctcaggatgacatagtgatgatcgaa
gacgataggccgcccctgcttcctgcccacctttccgaccagtcatcctccagttcccac
gatgacatgggctttgtgggagagaacccggtgccctggatccatgagctgcccggtcag
aatgaatgttcgctcagtccagatgcagaccctgatggttcgtttcagagggaaggcttc
ggccgccagagtatgtcagaaaaacgcaccaaacagtatgaaaatcctgctgagctggag
atcatcaagacacgcaagtccaagagcatggatctagtagcagatgaaattaacttcagc
acaagaaccaatggaggttccgcagaacaagaggtcggaccctcgctgggcctgaaaaag
tccagctcccttgaaagtctccagacagctgttgccgaggcaacgctgaacggtgagatg
aacgttcacaggccgcgctcacgaatcgtcaggggccgcggctgcaatgagagcttccga
gcagcaattgacaaatcatacgagaaacctggtgtcacaacggcagaagaagagaacagc
atggagacattggacgaggacacagagggaagttccagatcaggtcgtgagtcaatgtcc
accagcggcgacctcaatgtgggccccgggctgaacggcaacctctccaaagatgacaga
cagaaagatcgggacaaggttggggggaaggagaagaagaaacctgaaagggataaagag
agggagaaagacaaggacaagaacaaagccaagaaaggcgtgctgaagggcctgggcgag
atgttcaggtttggaaagcaccggagggatgagcggccaggagacaggatggagaggaag
ggctccagtaaatctaaagccgaggacatgcaggcgtcagaagaggagaccctgcggatg
agactggaacaagagagaatacaggccaagacacgggagtttcgggagaggcaggcaaag
gagagggaatatgccgagatccaagatgttgtcagccacaccttcagctcagatgaggag
cacacgtacgctggcatcggatcattagactcgtcggtggatagcagtagtatggagcct
tacaaccaccactaccatctccctcagagtccccagagccctcatcttcccttgagcctt
caggaaaacggtccacccctggaggctctgtatgcccaggtcaacaagccgcgcaatgga
cgccctgtagctccagacagcagtcagatggctcccagtaaccacgaccggatacaaagg
ctgaggaacgagttccagcaggccaagcaggaggaggacgttgacgaccatcggcacacc
tacaacttcaaccagtcctgggtgagcaatgggacagagacaccgagcggacgccattca
gtaacagttgagactcaggtccagaaacagcagcaagatgacagagatggtttccaacaa
gcacagagacagtacagctccctgccacggcaacctcgtaagaaccccagcacagtgtcc
caggactcatgggacaaggtgtacatgtcatcagagggattccagacatccaaggagaac
cctcgctactccggcagccagggatcacgtaacggctacctgggaacatccagcttcaat
gcccgtgtcctcttagagactcaggagctgctgaggcaggagcagagacgtagagagcag
gaggccaacaaggccaggccacctcctgcacaggaaacccccagcggcagcacctacgac
cacaacagagaccacactcaggccccaggctctgccccgatgcaggccccacctcagtcc
aagggcccctacagacaagacgtacccccgtcaccttctcagcttgccaagctcagcagg
cttcagggttcagagaaagggaggctgttttactcctga
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