Siniperca chuatsi (mandarin fish): 122866600
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Entry
122866600 CDS
T08948
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122866600 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122866600 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122866600 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
122866600
NCBI-ProteinID:
XP_044032400
LinkDB
All DBs
Position
LG19:27026824..27080414
Genome browser
AA seq
3082 aa
AA seq
DB search
MKLLLLLLLMERAAAQQRGLFPAILNLASNAVISSNATCGDPEPEVYCKLVEHVPGRRIK
NPHCPKCDANSVLSKERHPITNAIDGTNQWWQSPSIKNGRQFHWITITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFDPWQFYAISDSECLSRYNVTPRLGPPTYKSDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
ARDPRDIDPIVTRRYYYSIKDVSVGGMCICYGHAQSCPLDPVTEKLQCVCEHNTCGESCN
ECCPGYHQQAWQPGTVSEGNTCEKCNCHNKAVDCFYNQTVSELFLSLNTRGVRQGGGVCI
DCQQNTAGINCETCTAGFYRPAEVSPYSDSPCVECNCDLRGSESSVCTRDDTQPGVSAGQ
CLCKEGFTGRQCDRCAFGYRDFPQCVRCECNLPGSINTDPCSPCICKVNVMGAHCDLCKP
GFYNLQESHPLGCTDCFCFGVSNVCESSAWSTAQVLHTDAWLRPSQSLYTQPVVHGNDLP
IPGNTSSVHAHQQVLSWAAPDSFLGNKLVSYGGFLTYSVVYDVPLDNEDHSLPAHSDIII
EGNGRALLLSPPLLLFLSPLAERLIAIVMAPRRFVDIQTGVLVTRDDLLSVLADMTSLRV
RVHLNASADGPIRLSSVSLDFADSRSVSGIQAVAVEMCECPWGYSGASCEACLPGFYRVG
GVLFGGNCMQCECNDHATECDINGVCLGCTHNTTGPHCNQCLPGFYGDATEGTADDCQLC
PCPLTEPSNSFSPTCVLEVSGQVSCDQCQDGYTGTNCERCASGFYGNPQVVGGACVRCEC
NGNVDVSEAGHCDTVTGECLRCLGNTAGRHCEVCQPGYYGDALHAKECRECGCDVSGALS
SVCDVTTGQCSCRENVTGRTCDRCQSGFFGLQSGQGCRACDCSQSGSLSESCDEEGHCQC
VEGVAGHKCDRCSRGYYGFHANGCTACTCDHTRGNCDPESGECICPAHTQGDNCDRCETG
YWGHDPATGCKPCSCSAAGSSAPQCVLTNGQCPCREGFSGRSCDQCAPGYHGYPACSSCG
CDVAGTDEKFCNTTLGVCDCRHTGECVCKVGVSGRRCEECVSGWFALSAENPDGCSQCFC
SGLSRDCEEQGGLYRVPITLARSPTLLSLVSQSNLQGVVSGVYQQGGDMLLDTRNLNTSR
LAGPLYWRLPPQFESNQLLSYGGLLSYIITFYAEDGSGLSNQEPQVLMRGGTLRKLVIYT
DMVAPRNGFRTQHDIRMTEHKWKYFNSVSEKSVSHTDFMSVISSIEYIIIKASYGTRLQQ
SRISNITMETAVEAGLEEDSGVRGGVARLIESCVCPPGYSGLSCQECAAGFFRQPLSELS
SQSQKSLFVRPCVRCRCNDHSESCNTETGHCQDCQHHTSGRSCELCAPGYYGNVSGSIND
CSLCACPLRDNSFSATCVSEGVFGDFRCTACQTGYEGRYCERCSVGYYGNPSLPGGVCSR
CSCSGWGSLQPLCDALSGQCECKAGVKGQSCDQCDERHILQGGECVSCDDECTGVLLDDL
EKIHNHFLSVNLSAIAMAPYSQLVLLENQTRDIQVVFSENSSVPLHLSRVEDELNHVTSD
LSALLQQATRLSNDLEKVGVSTNDRLSQGALLLENISSLQNNIQVLQREAGHLNQTIEEE
LDSANQTRLLEEVESMLETIRAVNLTAANATTNQELSLAKSLVHSLEVDFLSRRVAVDDR
LRPLSASLTTGMETLQNTRTQLSEAAQRNTKTHILLDATHTLLQHYQSGRQNLSVGCLFV
DGVMEDSQLLLDNTVSLTEELTNTTAQVEVFNGQLDQWRPLLRKQVDALVVGLKMTDALE
NVYRAESHAHLLQNHAHSLHSSLSSVCNVSLNGSRLVRLDSDITEQVDSAQQVASIAHIS
ASLALNMTVQSEQLLSEEGEAKLNVSSTVLEESRRIHETAEVLHLNVSMVTTRLGLVRES
VCNSSLLLSQPITELQSISNGSSMVLQQVQLQAAAARSDLQEALQRLHRLRQQLQDSSSV
VENTNNTVKETNQLVTHTHSAANEVQRKLEEAEHRTERLMDRIKPLSLLGETLSRNLSDI
RELIDQARRQAASIKVAVQADRDCVRSYRPQLQSSNFNTLSLILKTSSQDNLLFYLGSNT
TVDFLAVEMHDGKVSLVWDVGSGSTRLEFPGLDITNNRWTRINATRFGAHGSLSVHQLES
ESTSFPTVTATSPGPSRVLDIDRNTVIHIGGLGATTQSPRTLRSSTFQGCLGEASLNERN
IGLWNYNSREGECGGCFSRYKHSPQAEETSFHFDGSGFSSVQKSLRATSTSIVLLFKTLS
PGGLLLYLASNNTRDFLSMELVEGRVRLTFDLGSGALILTSSKKYNTGVWYKITLQRNKR
KGYLSIMAADQSSEKEVLEAESPGTASDLNRSDLDPIYIGGLPASRPIRRQVVSRSYIGC
IKNVEIARSNFDLLRDAYGVRKGCVLEAVRSVSVLAGGFVQIAPRSLGQEAELLFSFSSN
NQSGVLLAAFSDDRTQRQHFLSVHLVSGALEAELGDIGGDTRRVIVVKPDGGSFSDGTKH
SVIVTINRKSLSVQVDEEHMKSVSLLPGRFSRLSPASFFIGGLPSGEESRLPIRLQDVSR
WFRGCIQNLVVGRVLIDLSGAVRYKGAELDSCLLEERVGGAVLPDDQDVEPTPDPAHLPV
APPTHLSALTPGALTCLSEAEPTFLPSAAQFGSSKHSHMTFIINPNTVRRSVSVRLSVRS
RALDGLILLLSDSKQMDFVVLRLTGGRLMMSADLGKGPASITSSVAINDGEWHTVSAEVS
RRSMLVSVDGSSPDSVSVKGNQLDVDNRLYLGGLPHTHTTRRINVSSSFPGCVHSVSLNG
AMLDLSKPASQHDVTSCFTNDQTGSYFNGSGYAALMRDGYKVGSDVSVSLEFRTSQSEGV
FLGISSAKVDAIGLEMINGQVVFNVNNGAGRVSVRSIGQMLCEGRWHRLVARKTKHTLSL
SVDGRSYTTPNPYPQSTSAETNNPVYLGGYPVGVKQNCLSISSRFRGCLRNLQLVKSHLS
DALDLSSAHFLLGVTPNSCPVA
NT seq
9249 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgctgttgttgctgctgatggagcgagctgcagctcagcagagaggtctg
ttcccggccatcttgaacttggccagtaacgcagtgatcagcagtaacgcgacgtgtgga
gatccagaaccggaagtttactgtaaactggtcgaacacgttccaggacgacgaatcaag
aacccacactgccccaaatgtgatgccaactccgtcctgtccaaagaacgtcatcccatc
acaaacgccatcgatgggacgaatcagtggtggcaaagtccgagtatcaagaacggacga
cagtttcactggattactatcaccctggacctcaaacagatttttcaggtcgcctacatc
atcatcaaggccgctaactctcctcgaccaggtaactggatcctggagcgctctctggat
ggtgtgacctttgacccctggcagttttacgccatcagtgactctgagtgtttgtctcgt
tacaatgtgacgccgagactcggacctccgacctacaagagcgacaccgaggtcatctgt
acgtcttactactccagactgaaccctctggagcatggagagatccacacctctctgatt
aatggccgacccggagccgatgatttgacgtctgacctcctgaacttcacgtcagctcgt
tacatcagactgaggcttcagcgaatcagaacgctcaatgccgacctgatgacgctgagc
gcccgcgacccccgagacatcgaccccatcgtcacccggaggtattattactccatcaaa
gacgtctctgtgggcgggatgtgtatctgttatggccacgcccagagctgcccgctggac
cctgttaccgagaagctgcaatgtgtatgtgaacacaacacctgtggagagagctgtaat
gagtgttgccctggttaccaccagcaggcatggcaaccaggaaccgtctccgagggaaac
acatgtgaaaagtgtaactgtcacaacaaagcagtcgactgtttctacaatcagaccgtc
tctgaactttttttgagtttaaacactcgtggtgtacgtcagggaggcggtgtctgtatc
gactgtcaacaaaacaccgccggcatcaactgtgagacctgcaccgccggattctacaga
cctgctgaggtttctccatattcagactctccttgtgttgagtgtaattgtgatctgaga
ggatcagagtcttcagtctgcaccagagacgacacacagccaggtgtgtctgcaggtcag
tgtctgtgtaaggagggttttacaggtcgacagtgtgatcgttgtgcgtttggatacaga
gattttcctcagtgtgttcgatgtgagtgtaacctgcctggcagtatcaacacggacccc
tgcagcccctgcatctgcaaggtgaatgtgatgggagctcactgtgatctgtgtaaacca
ggtttctacaacctgcaggagagtcatccactcggctgcaccgactgtttctgcttcggt
gtgtccaacgtctgcgagagctccgcctggtccacagctcaggttcttcatacagatgct
tggctccgcccctctcagtccctctacacccaacctgtcgtccacggcaatgacctcccc
atccccggcaacacctcctctgtccacgcccaccaacaagtgctgtcgtgggcggcgcct
gacagtttccttggcaacaagctggtgtcctatggaggtttcctgacctactctgtggtt
tatgatgtcccattggacaatgaagaccattctctccccgcccactctgacatcatcatt
gagggaaatggtcgggctcttcttctctctcctcctctcctcctcttcctctctccgctg
gccgagcgcttgatagccatagtgatggccccgcggcgattcgtggacattcaaacaggc
gttctcgttacccgtgatgacctgctctcagtccttgctgacatgacatcactgagggtc
agagttcacttgaacgcctccgcggacgggccgatacgtctcagttcagtgtctctggac
tttgctgactctcggtcagtttctggcattcaggcagttgccgtggagatgtgtgaatgt
ccttggggttacagcggcgcttcctgtgaggcgtgtctcccaggtttctacagggtggga
ggagtgttgttcggaggaaactgtatgcagtgtgaatgtaacgaccacgccaccgagtgc
gacatcaacggagtttgtttaggttgtacccataataccactggtcctcactgtaatcag
tgtcttcctggtttctatggcgacgccacagagggtacagcagacgactgtcagttgtgt
ccatgtcctctgacggagccgtccaacagtttcagtcccacctgtgtgctggaggtgtct
ggccaggtgtcatgtgaccagtgtcaggacggatacacaggaaccaactgtgagaggtgt
gccagtggtttctatggtaacccacaagtggtgggcggggcctgtgtccgctgtgaatgt
aacggtaatgtggacgtcagcgaggcggggcactgcgacactgtcacgggagagtgtctg
cgttgcctcggcaacactgccgggagacactgtgaggtctgtcagcctggttactatgga
gacgccttgcacgccaaggaatgtcgggagtgcggctgtgatgtgagcggcgccctctcc
agtgtgtgtgatgttacaacaggtcagtgttcatgcagagagaacgtgactggacgcacc
tgtgaccgctgccagtctgggtttttcgggctgcagagtgggcagggctgtcgggcctgt
gactgtagccaatcaggatctctctctgagtcatgtgatgaggaggggcattgccagtgt
gtggagggcgtggccggacataagtgtgaccgctgtagccgtggttactatggtttccat
gccaacggctgcacagcatgcacctgtgatcacaccagagggaactgtgaccctgagagt
ggcgagtgcatctgccccgcccacacacagggagacaactgcgacaggtgtgagacaggt
tactggggtcacgaccccgccacaggctgcaagccgtgcagctgcagcgcagcaggaagc
tccgcccctcagtgtgttctgaccaatggacagtgtccgtgcagagaggggttctctggc
aggtcatgtgaccagtgtgcccctggttaccatggttacccagcttgctcgtcatgtggc
tgcgacgtggcgggaacagacgagaagttctgcaacacaacactgggagtgtgtgactgt
cgacacaccggagagtgtgtgtgcaaggtgggtgtgtcaggtcgtcgctgtgaggagtgt
gtctctggttggttcgctctgtcagctgagaatccagatggctgctctcagtgtttctgt
tcaggactcagcagagactgtgaggagcagggaggactctacagagtacctatcaccctg
gctcgctctcccactctcttgtcattggtcagtcagtctaacctgcagggtgtagtatct
ggagtttaccagcagggtggcgacatgctgcttgacacacgaaatctcaacaccagcagg
ctggccggcccactctactggagactgcccccccagttcgaaagcaaccagctgctgtcg
tacggcggcctgctgtcttacatcatcaccttttacgctgaggacggctcggggctgtcc
aatcaggagcctcaggtcctgatgaggggcgggaccctgaggaagctggtgatatacact
gacatggtcgcccctaggaatggcttcaggacacagcatgacattaggatgacagagcac
aagtggaagtattttaactcggtgtcggagaagtcggtgagtcacactgacttcatgtcc
gtcatcagtagcatcgagtacatcatcatcaaggcttcatacgggaccagactgcagcag
agcaggatctctaacatcaccatggagacagcggtggaggcggggttagaggaggactca
ggtgttagagggggtgtggccagactgatcgagtcctgcgtctgtccacctggatacagc
ggattgtcctgtcaggagtgtgctgcaggttttttccgtcagcctctgtctgagttgtcg
tctcagagtcagaagtcgctgtttgttcgtccgtgtgttcgatgtcgctgcaacgaccac
agtgagagctgcaacacggagactggacactgtcaggactgtcagcatcacaccagtggg
cggagctgtgagctgtgtgccccggggtattatgggaacgtcagtggctccatcaatgac
tgctcgctgtgtgcttgccccctacgggacaacagtttcagtgccacctgtgtgtcagag
ggagtgtttggtgatttccgctgcaccgcctgtcagacgggatacgaggggagatactgt
gagaggtgttctgttggttactatggtaacccgtcgttgccaggcggggtgtgttcacgg
tgcagctgcagtgggtggggctcgctgcagccgctgtgtgacgcactgagcggacagtgt
gagtgtaaggccggggtcaaaggtcagtcgtgtgaccagtgtgacgagaggcacattctg
cagggaggagagtgtgtgtcatgtgatgacgagtgcaccggcgttctgttggacgacctg
gaaaaaatacacaaccacttcctgtctgtgaacctgagcgccattgccatggcaccgtac
agccagctagtgttgctggagaaccagaccagagacatccaggtggtgttttcagaaaac
agctcggttcctctgcatctgtccagagtagaagacgagctaaatcatgtgacctctgac
ctcagcgctctgctgcagcaggccacacgtctgtctaacgacctggagaaagtgggcgtg
tccaccaacgacaggctttcccagggtgcactgctgctggagaacatcagcagccttcag
aacaacatccaggtgcttcagagggaggcggggcatctgaaccagaccatagaggaggag
cttgattcagccaatcaaacgcgtctgctggaggaggtggagtccatgttggaaaccatc
agagctgtcaacctaacggccgccaacgccacgaccaatcaggagctcagtcttgcaaag
tctctcgtccactcactggaggtggacttcctgtccagaagggtggcggttgacgacagg
ctccgccccctctccgcctccctcaccactggcatggaaacgctgcaaaacacgcgcaca
cagctgagcgaagctgcacaacgaaacacaaaaacacacattctgctggacgccacacac
actctgctgcagcactaccagtccggccgtcagaacctgagtgttgggtgtttgtttgtg
gacggagtgatggaggacagtcagctgctgttggacaacaccgtcagcctgacggaggag
ttaacaaacaccaccgcacaggtggaagtgttcaacggtcagttggatcagtggcgcccc
ctgctgaggaaacaggtggacgctttggttgttggactgaagatgacggatgctctggag
aatgtttaccgtgcagaaagccacgcccacctgctgcagaaccacgcccactccctgcac
agctctctgtcgtcggtgtgtaacgtgtctctgaacggcagccgattggttcggctggac
agtgacatcacagaacaagttgactccgcccagcaggtcgcctcaatcgcccacatctcc
gcctccctcgctctcaacatgaccgtccaatcagagcagcttctgtcagaggagggcgaa
gccaaactgaacgtcagctctactgttttagaagaaagtcgacgaatccacgagacggct
gaagtcctgcacctgaatgtctccatggtaaccaccagactgggattggtcagagagagc
gtctgtaactccagcctcctcctcagtcagccaatcacagagctgcagagcatctctaac
ggttcgtccatggtgctgcaacaggttcagcttcaggctgcagcagcacgctctgacctg
caggaggcgctgcagcggctgcacagactcagacagcagctgcaggattcttcttcggtg
gtggaaaacaccaacaacacagtgaaggagaccaaccaactggtaactcacacacacagt
gcagccaatgaggtgcagcgtaagctggaggaggcggagcatcgtacagagcgtctgatg
gaccggataaagccgctgagcttgctgggagaaacattgagccggaatctttctgatatc
agagagctgatcgatcaggcccgaagacaggccgcctcgattaaggtggcggtgcaggcg
gacagagactgtgttcgatcctacagaccacagcttcagtccagtaacttcaacactctg
agtctgatcctgaagacatccagtcaagataacctgctcttctacctgggcagcaacacc
acggtggacttcctggcagtagagatgcatgatgggaaggtttctctggtgtgggatgtg
ggttccgggagcaccagactggagtttcctggactagacatcactaacaacagatggacc
agaatcaacgctacacggtttggggcccatggctctctgtcagtccatcagctggagtca
gagtccacttcgtttcccacagtaacggcaacatcaccgggaccatcccgagttttagac
atcgacagaaacacagtgatccacatcggaggactgggagctaccactcagagccccagg
acgctgcggtcctccaccttccagggctgcctgggtgaagcatcgctcaacgagagaaac
atcggactgtggaactacaacagcagagagggagagtgtggaggctgcttcagcaggtac
aaacacagtccccaggcagaggagacatccttccactttgatggatcaggtttctcatcc
gttcagaagtctctgcgagcaacctccacctctatcgtcctgctgtttaaaacgctgtca
ccgggcggattactgctgtacctggcctccaataacactagggacttcctgtccatggag
ctggtggaggggcgtgtccgtctgacctttgacctgggctcaggtgctctgatcctgacc
tccagcaagaagtacaacacgggggtgtggtacaagatcacactgcagaggaacaaacgc
aaaggttacctttccatcatggcagccgaccaatcatcagagaaggaggtgttggaggcg
gagtctcctgggacagcctctgacctgaaccgctctgacctcgaccccatctacattgga
ggacttcctgcctccagaccaatcaggcgacaggtggtctccaggtcatacataggctgt
ataaagaatgtggaaattgctcggtccaactttgacctgctgagagacgcatatggagtc
agaaagggctgcgtactggaggcggtgcggagtgtgtcggtgttggccggaggcttcgtt
cagatcgctcctcgatcactcggtcaagaggcggagcttctcttctccttctcctccaac
aaccaatcaggagtcctgctggctgccttcagtgacgaccgaacacagagacagcacttc
ctgtctgtccacctggtctccggtgcgttggaggcggagcttggtgacattggcggggac
actaggagggtgatagtggtgaaacctgatggagggtccttcagtgacggaacaaaacac
tctgtgattgtcaccatcaacaggaagtctctgtctgtgcaggtagacgaggaacacatg
aaatccgtctctctcttgccgggcagattttctcgtctgtctccagcctctttcttcatt
ggtgggctgccatcaggggaggagtctcgtctaccaatcagattacaggatgtgtcaagg
tggttcagaggctgcatccaaaacctggtggtgggcagagtgctcatcgacctatcagga
gctgtgaggtacaagggggcggagctcgacagctgccttttggaggagagagtcgggggg
gcggtgcttcctgatgaccaggatgtagaaccgactcctgaccccgcccatctgcctgta
gccccacccacacatctgagcgccttgacacctggagcactaacatgtttgtcggaggcg
gagccaaccttcctgccttcggcggctcagtttggttcgtccaaacacagtcacatgacc
ttcatcatcaaccccaacactgtcagaaggagcgtgtcggtcaggttgtcggttcgaagc
cgagctctggacgggttgatcctcctcctctctgattccaaacagatggacttcgttgtc
ctcagactgacgggggggagactgatgatgtcagctgaccttgggaaaggccctgcctcc
atcacctcgtctgttgccattaacgatggagagtggcacactgtgagtgctgaggtcagc
cggcggtcgatgttggtgtcagtcgacggttctagtccggactctgtgtcagttaaagga
aaccagctggacgtggacaacagactttacctgggaggactgccacacacacacactacc
aggaggattaatgttagcagcagttttccaggttgtgttcactccgtcagtctgaacgga
gccatgttggatctgtccaagccggcctcgcagcatgatgtcacttcctgtttcaccaac
gaccagacaggaagttactttaatggcagtggatacgccgccctcatgcgtgatggttat
aaggtcggatctgacgtgtcagtgtctctggagtttcgaacgagccaatcagaaggagtg
tttctgggaatcagcagcgcgaaggtcgacgccatcggactggagatgatcaacggacag
gtggtgtttaacgtgaataacggtgcgggtcgagtgtcagtgcgttcgattggtcagatg
ttgtgtgaaggacggtggcaccgcctggtggccagaaaaaccaaacacaccctgagtctg
agtgtagacggccgtagttacaccacccccaacccttacccgcagtccacctctgctgag
accaacaaccctgtttatctgggaggctatccagtcggtgtcaagcagaactgcctgtcg
atcagctccaggttcagaggttgtctgaggaacctgcagctcgttaagtctcacctgagc
gatgctctggacctgagctccgcccactttttgttgggcgtcactcctaactcatgtcct
gttgcctag
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integrated database retrieval system
