Siniperca chuatsi (mandarin fish): 122866621
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Entry
122866621 CDS
T08948
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122866621
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122866621
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122866621
NCBI-ProteinID:
XP_044032453
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All DBs
Position
LG19:2869819..2896192
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AA seq
518 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGMSSISDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYTTVTPHVRNVPV
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPDLPAGDGQPSLDPTVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggagtgaagagaggatcagacgagctgagtatg
tacaacagtcccaactctggcatgagcagtatcagtgacggggcttccaatggcagtgac
agtaaaaagctgagggtggaggaggccccaccatctcgtgtgcttcacatcaggaaactg
cccaacgaggcctccgagactgaagtcatcgcccttggcttgccttttgggaaagtcacc
aatatcctcacactgaagggaaagaaccaggcgttcttggagatggggacggaagaggcg
gccatcactatggttaactactacaccactgtaactcctcatgtccgcaatgtccctgtc
tttattcagtactccaatcacaaagaactcaaaactgatgctggcaatcagcggacccag
gcggtgcttcaggcagtgtcggcagtccagtctggagggtcaccaagctcagatgtacag
gaagccctcgctgcagcctccagtcctgtgctgcggatcatcatcgacaacatgttctac
cctgtaacgctggatgtactgcaacagattttctccaagtttggtacagtcatgaaaata
atcacattcaccaagaacaatcagttccaggcccttctgcagttcagcgatcctgtcaat
gcacagcaggccaaactggcactggatggtcagaacatctacaattcatgttgcacgctg
cgtatcgacttctccaagctggtcaatctaaatgtcaagtacaacaacgataagagtcgc
gactacacgcgacctgacctgcctgctggcgacggccagcccagcctcgaccccacagtg
gccgctgccttcagcaaagactccaactccctcctcggtaagatcccaggagccctgaac
cctctgagtgcggcagcggctgctgctgctgctgccgggagggtggccctagctggacag
gcagggtccagtggggtcctgctggtcagcaacctcaatgaggagatggttacgccccaa
agtctgtttaccctcttcggagtgtatggcgatgtccagagggtgaaaattctttacaat
aagaaggacagcgctctcattcagatgtcagacgccaaccaggcccagctagcaatgagc
cacttgaatggccaaaagatgtatgggaagatcatccgggtgacgctgtccaagcaccag
acagtggcactgcctcgtgacggtctggacgaccagggcctgaccaaggactacgccaac
tccccacttcatcgcttcaagaaacctggctccaagaacttccagaacatcttcccacca
tctgccacactccacctctccaacatcccacaagatgtgactgaggatgacctgcggctg
ctcttctccaatgctggaggcactgtgaaagcattcaagtttttccaggatcgcaaaatg
gctctgatccagatgtcaacagtggaggaggctatccaggccttgattgaccttcacaac
tacaacatgggaggcaaccagcacctgagagtctccttctccaagtccaccatttaa
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