Siniperca chuatsi (mandarin fish): 122866664
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Entry
122866664 CDS
T08948
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122866664 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122866664 (stau1)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122866664 (stau1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122866664 (stau1)
mRNA cycle factors
Stress granule specific factors
122866664 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
122866664
NCBI-ProteinID:
XP_044032572
LinkDB
All DBs
Position
LG2:complement(15984601..15992173)
Genome browser
AA seq
703 aa
AA seq
DB search
MSQLQFQCPASPMPAASAPLQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALEETTLPKPTVRMPRNTGKNPADGMTHTMELNALCMKLGKKPMY
KPIDPYPGMRPQNFNYNVRAPGPYQRSMQQYYYPFPPVGPVLYHMELSIGGQQFIGKGRT
RQLAKHDAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVCVTVGEFAGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQFA
ECFLVQVSVCGQSAEGMGPSKKVAKRNAAEKMLDLLGYKVPQPQPPKPALKTDEKTPVKK
PGDGRKVTFFEPGSVEEVALCSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGVCQGSQA
KDYSRAMPNPGMATITAMIANELLYAGTSLTAETILKNKNNLNQLPHGPITRPSEQLSYL
SSVQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCRDMAALNILKLLSEL
DQQPNERTGNGPVSRCGKQEIEGDLHLKQTNSSTLAQTLDGTV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagtttcagtgtccggctagccccatgcctgctgcttcagccccactg
cagctggggcagccacagcctggctacagtatcccttgtgcctcgggcactctaccctcg
gagagcgccagccagcccatcaggagctctgctctccccgctggctcagccactccctac
aataccaccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagatccaacctgagtataagctgctttgtgagcaagga
ccagctcactccaagattttctcagttaggctcacactgggagatcagcactgggaagca
gaggggaccagcatcaagaaagcccagcattccgctgctgcatccgcccttgaagagacg
acacttcccaagcccaccgtgaggatgccccgcaacacaggcaagaacccagcagatggc
atgacacataccatggagttaaatgcactatgtatgaaacttggtaaaaagcctatgtat
aaacccatcgacccatacccggggatgagaccacaaaacttcaactacaacgtccgggct
ccaggaccttaccagcgctctatgcaacagtactactacccatttcctccagtgggacca
gtattataccacatggagctttccatcggaggccagcagtttattgggaagggacgcaca
cggcagttagccaaacatgatgctgctgccaaggccctgaaagtgctgcacaaggagcca
atattgcaacagttgccagtgatgaacggagagcccgaggaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcacttaaacgcaacttacctgtcaactttgaggtt
ttaaaggaagaaggacctccccacatgaagagttttgtagtgtgtgttacagtcggggag
ttcgctggagagggcgaaggaaagagtaaaaagattgccaagaagctggcagcagcagcg
gtgctgggggagttgaagaggctaccccatatacccagtgtggaaaagacgctgccacgc
atcaaaaagaaaaccaaatccatcatcaagctgcagaccagcccagaatatggtcaggga
atgaatcccatcagccgcctggctcagatccagcaggccaagaaggagaaggaaccagag
tacagcatggtgacagagagaggtctacctcggcgcagggagttcgtcatgcagtttgct
gaatgttttctggtacaggtgtcggtgtgcggccagtctgcagagggaatgggacctagt
aagaaggtggccaagaggaacgcagcagagaaaatgttggatctcttgggatataaagtg
cctcagcctcagccccctaaaccggcactcaaaactgatgaaaagaccccagtgaagaaa
cctggtgatgggcgcaaagtgaccttttttgaacctgggtctgtagaggaggtggcattg
tgttccaaggaggaggacttccgcctgccttacctgagccaccagcagctgcctgcaggt
atcctacccatggtccctgaggtggctcaagcagtcggggtctgccaaggatcccaggcc
aaggactacagtcgagcaatgcccaacccaggcatggccacaatcactgccatgattgcc
aatgagctgctttacgcagggacatccctgactgctgagactatcctaaagaacaaaaat
aacctgaaccaactgccccatggacccatcaccaggccttcagaacagctcagctatctt
tcatctgtgcagggcctgcaggtggaatacaaagattttcccaaaaacaataagaatgag
tttgtgtcactgattaactgctcctcccagccaccgctcatcagtcatgggattgggaaa
gatgtagaatcctgtcgtgatatggctgcactgaatatattgaagttgctctcagagttg
gaccagcagccaaatgaaaggacaggaaatggaccagtttctcggtgtggcaagcaggaa
atcgaaggtgacttgcacctcaaacagactaactcaagcacattggcacagaccctggat
ggcactgtttag
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