Siniperca chuatsi (mandarin fish): 122866688
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Entry
122866688 CDS
T08948
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122866688 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122866688 (nup58)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122866688 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
PSY3
Nup49_C
Tox-ODYAM1
Motif
Other DBs
NCBI-GeneID:
122866688
NCBI-ProteinID:
XP_044032628
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All DBs
Position
LG19:complement(11746362..11761390)
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AA seq
596 aa
AA seq
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MSGFNFGSGTLGSANTGGGFAFGAITSAPAANTGGFSIGTALGTAAPTPASTTSTTPSLG
LGGSLFGQKPTGGFSFNTPASSAAAPTAGLTLGAPATTAASTGFSLAFNKPTASATPFSL
TTTATTSSSAPAGAGLTFGSVLTSTAPQQAAAMGFTLGGTTATTAASTGPSLGGSLFSST
MSSGLGQTTLGGGGLTLGSLLATSTAVSAAPAPSIGLGGVDFSTSSESKSDSSSGANAQD
SKALKDENLPPVICQDVETFQKFVKDQKQVQEDISRMSSKAISKVQDDIKSLKQLLSVSA
SGLQRQALAIDKLKMETAQELKNADIALRTQKTPPGLQHENTAPSDYFRCLIEQFEVQLQ
QYRQQIEELENHLTTQSSGSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYL
SYRRAFLEDSTDVFESKRASNRKWQSAARVTTGPAPFSSVPNAAAVAMAATLTQQQQPTP
GTQAPLGAGFGNPFASAVGTSLGSSTLGGFGGGPGFGGVGTGGSSFAFSTSKPTGGSLSA
GFGSSSNSGFNFSNPGINPSAGLTFGVSNQPAAGFGTGGPLLQLKKPPAGNKRGKR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctttaactttggatcggggactcttggttctgccaacactggtggaggattc
gcatttggggccataaccagtgcacctgcggccaatactggtggtttctctatcgggact
gccctcggtacagcagccccaacccctgcctcaaccaccagcaccaccccgtctcttggt
ctagggggcagtctctttggtcagaaacctactggaggattctctttcaacacacctgcc
tcaagtgctgctgcacccactgcaggccttacattaggtgccccagccactacagctgcg
tccactggcttcagtttggccttcaacaagcccactgcctcagcaacacccttctccctc
accaccactgctaccacctcctcatcagctcctgcaggggcaggtttaacatttggctct
gtcctgacatccacagctccacagcaggctgcagccatgggcttcacccttggtggcaca
acagccaccacagcagcctcaacaggcccgtcactgggcgggagtctcttctccagcact
atgtcttcaggtttgggtcagaccactcttggaggaggcggcttaacattgggttctctg
ttagctacctccactgcagtatcagcggcccctgcccccagtattggcctgggtggagtc
gactttagcacttcctctgagagtaagagcgactcatcatctggagccaatgcgcaggac
agtaaagctttaaaagatgagaacctgcccccagtcatttgtcaggatgtcgagactttc
caaaaatttgtgaaggaccagaagcaggttcaggaggacatcagcaggatgtcatctaag
gccatttctaaagtccaagatgacatcaagagcctcaaacagcttctgtctgtcagtgcc
agcggtctgcagcgccaagctctggccatagacaaactaaagatggagacagcgcaggag
ctgaaaaatgctgacatagcactgcgtacacaaaagactccccctggacttcaacatgag
aacactgctccatcagattatttccgttgcctgatagagcagtttgaggtacagttgcag
cagtaccggcagcagatagaagagctcgagaaccacctgacaacgcagagcagtggctca
cacatcactcctcaggacctgaccttggccatgcagaagttgtaccagacatttgttgcg
caggctgcccagctccagtctgtccatgagaatgtcaagatcttgaagcaccagtacctt
tcctaccgcagggccttcctggaagactccacggacgtctttgagtccaaacgggcatct
aacaggaagtggcagagtgcggcgcgagtcacgactgggcctgccccgttctccagtgtg
cccaacgctgcagcggttgccatggcagccacgttgacccagcaacagcagccaactcca
gggacccaggcacccttgggggcagggttcggaaacccctttgcctcggcagtgggcact
agcttgggctcttctacccttggaggttttggtggtgggccaggatttggtggggtgggg
actggggggtcttcttttgccttctccaccagtaagcccacaggaggcagtctgagtgca
ggttttggtagcagtagcaactctggctttaacttcagtaaccctggtatcaacccctcg
gctggcctgacctttggcgtgtctaaccaacctgccgcaggcttcggcacaggaggaccc
cttctccagctaaagaaaccccccgctggtaataaaaggggcaagagatag
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