Siniperca chuatsi (mandarin fish): 122866885
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Entry
122866885 CDS
T08948
Name
(RefSeq) cadherin-20-like isoform X1
KO
K06807
cadherin 20, type 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122866885
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122866885
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122866885
NCBI-ProteinID:
XP_044033033
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Position
LG19:22947503..23025331
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AA seq
796 aa
AA seq
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MGDRLHLPAVASTLLPVALCILTLLPHSLLGKPAEEENAGSSALLQRVKRGWVWNQFFVL
EEYTGLEPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDREVKAQ
YILRAQARNRLTDRPLEPESEFIVKIQDINDNEPRFLDGPYQASVPEMSKIGTSVIQLSA
TDADDPTYGNSARVVYSILEGQPYFSVDAKTGVVRVSLADMDRETRENYTVVIQAKDMGG
QLGGLAGTTTVNITLSDINDNPPMFDQRLYQMSVPESAPVGSVVGRIWAKDRDIGVNAEM
KYSIIDGDGRDTFDISTDPTNLFGIIMVKKPLNFESKPSYTLKVEGTNTHLDPALRHRGP
FKDVTIVHVSVEDVDEPPLFDLPAYYIELPEDTEIGTVVKTVSARDPDAANNTVRYSIER
SSDPEKFFYIEITSGSLMTVRPLDREEIGWHNITILAMEMNNPTQIASVSVAVKILDVND
NPPSLTHYLEAYVCENAKAGQLIQTVTAVDPDEPLGGQHFYYSLAPEAANNPNFTLRDNQ
DNTAWILTRRGGWSQQDHTVFYLPIFISDGEQPVQTSTSTLTIRVCSCDQEGNVMSCNAE
AYSLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRYDDEG
GGEEDTEAFDIAAMWNPREAHHHLGKMRQDMLPEIESLSRYVPQACVMGGGGDSNVQGYV
LAKLLEADMDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGTSNMDHEYDYLNDWGPRFKK
LAEMYGVLETNSPPMW
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgactgcatcttccagcagttgccagcaccttgctccctgtggccctctgc
attttgacccttctgcctcacagccttctgggtaagcctgcagaggaggaaaacgcaggc
agctcagcattgctccagagggtgaagagaggctgggtgtggaaccagttctttgtcctg
gaggaatacaccggactggaaccactttatattggaaagctccactcagacatggataaa
ggcgatggctccattaagtacattctgacgggcgagggcgcgggcaccaccttcaccatt
gacgacagcactggggacatccacgccatccagaggctggaccgggaggtgaaggcccag
tacatcctccgcgcccaggcccgcaaccgcctgacagacaggcctctggagccagagtcc
gagttcattgtaaagatccaggacatcaacgacaacgagccgaggtttctggacgggccc
taccaggcatcagtacccgaaatgtccaaaataggaacatctgtgatccagctaagcgct
acagatgccgatgaccccacgtatggcaacagtgctcgtgtggtctacagcatcctggag
ggccagccttatttctcagtggacgccaagactggcgtagtccgtgtgtccctggcagat
atggaccgggagaccagagaaaactacactgtggtcatccaggccaaggacatgggcggt
cagctgggggggctcgctggtaccaccactgtcaacatcacactcagtgacatcaatgac
aacccacccatgtttgaccagaggctgtatcagatgagcgtcccagagtcagctcctgtg
ggttcagtggtgggtcgtatctgggcaaaggacagggacattggggtcaacgctgagatg
aagtacagcatcattgatggagatggaagagacacctttgacatcagcactgaccccacc
aacctttttggcattatcatggtgaaaaagccactgaactttgagagcaagcccagttat
actctgaaagtggagggcaccaacacccacctggaccctgccttacgccaccgtgggccc
ttcaaggacgtcaccatcgtgcacgtgagcgtggaggacgtggacgagcccccgctgttt
gacttgccagcgtattacatcgagctgccagaggacactgagatcgggacggtggtgaag
acggtgtcagcgagggatcctgatgctgccaacaacactgtgaggtattccatcgagagg
tccagtgaccccgagaagttcttctacatcgaaatcacttctgggtcgctgatgacggtg
cgtccgctggaccgagaggagatcggctggcacaacatcaccatcctcgccatggagatg
aataaccccacacagatcgcgagtgtgtcagtggctgtgaagatcctggatgtgaacgat
aatcctccctcgctgacgcactacttggaggcttatgtgtgtgaaaatgccaaagcaggg
cagctgatccaaactgtgacagcggtggatccagatgagccgctgggcggacaacacttc
tactacagcttggctccagaggccgccaacaaccccaacttcaccctgagagacaaccaa
gacaacacagcgtggatcctgacgcggcgcggaggctggtcacagcaggaccacaccgtc
ttctacttgcccatcttcatctctgacggcgagcagccggtccagaccagcaccagcacg
ctgaccatccgcgtgtgcagctgcgaccaggagggcaacgtcatgtcatgcaacgccgag
gcgtacagtctgcccgcaagcctcagcagaggagcactcattgccatcctggcctgcatc
tttgtcctgctggtgatgattctgctcatgctttccctgcgcacccatcgcaagaagccc
tacctgtgcgacgaggaggagaacgtccacgagaacattgtgcgctacgacgatgaaggt
ggcggcgaggaagacaccgaggccttcgacatcgccgccatgtggaatccgcgtgaggcg
caccaccacctgggcaaaatgagacaggacatgctgccagagatcgagagcctctcacgt
tacgtccctcaggcatgtgtcatgggcggcggcggggacagtaacgttcaaggatatgtg
ctggcgaagctcctggaggctgacatggacccgtgcgccccaccttacgactccctgcag
acctacgcctacgagggggaaggttcggtcgctgagtcgctcagctcgctccagtcgggg
acgtccaacatggaccacgagtacgactatctcaacgactgggggcctcgctttaaaaag
ctcgctgagatgtacggcgtgctggagacaaacagtcctccaatgtggtag
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