Siniperca chuatsi (mandarin fish): 122867063
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Entry
122867063 CDS
T08948
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122867063 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122867063 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
schu03016
]
122867063 (si:dkey-37o8.1)
03012 Translation factors [BR:
schu03012
]
122867063 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
schu04131
]
122867063 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122867063 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122867063 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122867063 (si:dkey-37o8.1)
Translation factors [BR:
schu03012
]
Eukaryotic type
Elongation factors
122867063 (si:dkey-37o8.1)
Membrane trafficking [BR:
schu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122867063 (si:dkey-37o8.1)
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122867063 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
G-alpha
Motif
Other DBs
NCBI-GeneID:
122867063
NCBI-ProteinID:
XP_044033370
LinkDB
All DBs
Position
LG19:18800600..18803117
Genome browser
AA seq
457 aa
AA seq
DB search
MAKEKTHVNVVIIGHVDSGKSTTTGHLVYKCGGVDQRRLEKFEKAAAQMGKSSFKFAWVL
DKLKAERERGITIDISLLKFNTQKYTMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGISRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRFDEMVRGVSGFLKK
IGYDSTAVPFVPISGWTGENMITATQKMPWFQGWKARRREGNTSGRTLLEVLDSIHPPVR
TINKPLRLPLQDVYKIGGIGTVPVGKIETGILKPGMTLMFSPAKLTAEVKSIEMHHQGLQ
TALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVSSFEAQVIILNHPGKVKAGYSPV
LDCHTAHVTCRFAELKEKVDRRTGKKLEDQPQILMSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKDHGSKPPHKAQVCK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagaagactcatgttaatgtggtcattattggtcatgttgacagcggcaag
tcaaccaccaccggccaccttgtctacaaatgtggtggcgtcgatcagagaagactggag
aagtttgagaaagctgcagcacagatggggaagagttccttcaaatttgcttgggtgctg
gacaagctgaaagcagagcgggagagaggaatcaccattgatatctcactgctgaaattt
aacactcaaaaatacaccatgactataattgatgctcctggccaccgtgacttcattaaa
aacatgataacagggacttcacaggctgatgttgccctcctggtggtctctgcagctaaa
ggagagtatgaggctggtatatcaagaagtggtcagaccagagagcacgccttactggct
tacactctgggtgtcaagcagatcatagtctgtgtgaacaagatggatctgactgaacca
ccttacagccagaaacgctttgacgagatggtgcgaggcgtcagcggcttcctcaagaag
attggctacgactccacggctgtgccttttgttccaatttcaggctggactggggagaac
atgatcactgcaactcagaagatgccctggttccaaggctggaaagccagacgaagggaa
gggaatacaagcgggagaactctactagaagtcctggactccattcacccgccagtgcgc
accatcaacaagcccctacgattacctctgcaggacgtctacaaaattggaggaattggg
actgtgccagtgggtaagattgaaactggcattctcaaacctggcatgactctgatgttc
tcccctgccaagctcactgctgaggtaaagtccattgagatgcatcaccaagggctgcag
acggctctgccaggacacaatgttggcttcaacattaagaatgtggctgtcaagaatctg
cggcgtggagatgtggctggcaacgcccagcaggatcctccatcagacgtcagcagcttt
gaagctcaggtgatcatcctgaaccatccagggaaggtcaaagcgggctactctcccgtc
ctggactgccacaccgcccatgtgacctgccgctttgctgagctgaaggagaaggttgac
cgccgcacaggcaagaaactggaggaccagccgcagatactgatgtctggagatgctgct
acagtcaaactggttcccatcaagcccatgtgtgtggagagcttcttcacataccctcct
ttaggtcgctttgcagcaagagacctgaagcagacagttgctgtaggtgtcatcaagtct
gtggagaaggaccatgggtcaaaacctccacacaaagcccaagtgtgtaaataa
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