Siniperca chuatsi (mandarin fish): 122867200
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Entry
122867200 CDS
T08948
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03266
Virion - Herpesvirus
schu04081
Hormone signaling
schu04145
Phagosome
schu04148
Efferocytosis
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122867200
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
122867200
04512 ECM-receptor interaction
122867200
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122867200
04148 Efferocytosis
122867200
09144 Cellular community - eukaryotes
04510 Focal adhesion
122867200
09142 Cell motility
04820 Cytoskeleton in muscle cells
122867200
04810 Regulation of actin cytoskeleton
122867200
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122867200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122867200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122867200
04515 Cell adhesion molecules [BR:
schu04515
]
122867200
04090 CD molecules [BR:
schu04090
]
122867200
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122867200
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122867200
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin beta subunits
122867200
CD molecules [BR:
schu04090
]
Proteins
122867200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_integrin
EGF_Teneurin
EGF_TEN
BNR_6
Motif
Other DBs
NCBI-GeneID:
122867200
NCBI-ProteinID:
XP_044033604
LinkDB
All DBs
Position
LG20:complement(11631854..11654611)
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPVQRILWICGLIFTGITGVCGLNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVA
SSSRCDLPSELVAAGCALSALASPTSKMHVIEDRPLSNKATGATQNVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVSRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKDQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGQC
HLNSDNMYSMSTTMDYPSLALITEKMSENNINLIFAVTNLVVPLYQNYSELIPGTTVGTL
SNDSGNVVQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPKQKNKTFIIKPVGFKDSLSITVTFECDCKCQTKAQPNSPKCNHGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDRCSRHTGSGGPQSAICSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SNLGLLCSGRGQCVCGTCECTQPGAYGVTCDKCPTCPDACTMKKECVECKHFKRGKLFDD
NTCSRICKDEIVLVDELVLHDTNAVNCTYKDENDCVERFQYYEDASGKSILFVVKEPDCP
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctctcccggtgcaaaggatattatggatatgtggtttgatctttactggaata
acaggagtttgcggtttaaacgtctgcacctccagaggggccagcacatgcaagcaatgt
ctggctgtgcaccccagctgtgcgtggtgcttccaggaggatttcggccagggggttgcc
agttcttcccgctgcgatctgccaagtgagctggtggcagcgggctgtgcactgtcagct
ctggcgtctccaaccagcaaaatgcatgtgatcgaggaccggcccctcagcaacaaggca
acaggggccacgcaaaacgtcacccagataaaaccccagaaactacacatcaccctcagg
ccagatgatgctaagcgctttacagtgaaggtgcgtcaggtagaggactaccccgtggat
ctctactacctcatggatctctcctactccatgaatgatgatctcttccgcctgaggaca
ttgggaaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggggcttttgtggacaagccgctctcaccttacatgtacatctcccccaaagaggctgta
aagaacccctgctacagcattaacaccacctgcctgccccagtttggctacaaacacgtt
ctgtctctgacggaggaggtgagccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagatgccccggaaggaggctttgatgccatcatccaggctgctgtgtgcaag
gatcagatcggttggcgccccggtgcatcccaccttctgatcttcacctcagatgctaag
actcacgtggctctggatggtcgtctggctggaatcgtgcaacccaacgatgggcagtgc
cacctcaactctgacaatatgtacagcatgtctaccaccatggattacccatctctagct
ctgatcacagagaagatgtcggagaacaacatcaatctcatctttgctgtcaccaacctt
gtggttcctctgtaccagaactacagtgagttgattcctggcaccacagtaggaacactg
tccaacgactcgggcaatgttgttcagctcattctgaaggcctacgctaaaatccgttcc
aaggtggagctggagcttcaaggtgtcccggaggagttgtccctgtccttcaatgccacc
tgtctgaatggagagctcatccctggcctcaaatcctgctctgggctcaagataggagac
acggtctctttcagtgtggaggccagagctcgcggttgtcccaaacagaagaacaaaacc
ttcatcattaaacctgtgggcttcaaggactccctctccatcactgtcacctttgagtgc
gactgcaagtgccagaccaaagcccagcccaatagccccaaatgtaaccacggcaacggc
acctacgagtgtggcatctgcctgtgccacccaggtcgcttagggccacactgcgagtgt
gcagagggtgactataaccccacagagcaggaccgctgcagtagacacactggctctgga
ggacctcagtctgccatctgcagcggccgtggagactgcgtgtgcggccagtgtgtgtgc
cacagcagtgactttggaaaagtctggggaaagctgtgtgagtgtgatgacttcaactgc
ctgcgctacaagggggaactgtgctcaggtcatggcgtctgtaactgtggcttctgccag
tgtgcacccgactggcagggtgagaactgtaactgctccagacgtactgacacctgtatg
tccaacctgggtctgctgtgcagtgggaggggccagtgtgtgtgtgggacctgtgagtgc
acccagcccggggcctacggagtcacatgtgataagtgtcccacctgccctgacgcctgc
accatgaagaaggagtgtgtggagtgtaagcacttcaagaggggaaagctgtttgatgac
aacacctgctctcgaatctgcaaggatgagattgtgcttgtggatgaattagtgctccat
gatacaaatgctgtgaactgcacttacaaagatgagaatgattgcgtggagcgtttccag
tactatgaggacgccagtggcaaatcgatcttgtttgttgtcaaagagccagactgcccc
aagggtcctgacattttggtggtgcttctgtcggtggcaggagccatcttgtttcttggc
ttggcagctctgcttatctggaaactgctggtcaccatccacgacagacgggagttcgcc
aaatttgaggaagaacgcgctcgtgcaaagtgggacacggggcacaatcctctctacaaa
ggagccacatctaccttcacaaacatcacatacagaggaaaagactga
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