KEGG   Siniperca chuatsi (mandarin fish): 122867200
Entry
122867200         CDS       T08948                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03266  Virion - Herpesvirus
schu04081  Hormone signaling
schu04145  Phagosome
schu04148  Efferocytosis
schu04510  Focal adhesion
schu04512  ECM-receptor interaction
schu04810  Regulation of actin cytoskeleton
schu04820  Cytoskeleton in muscle cells
schu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    122867200
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    122867200
   04512 ECM-receptor interaction
    122867200
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122867200
   04148 Efferocytosis
    122867200
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122867200
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122867200
   04810 Regulation of actin cytoskeleton
    122867200
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122867200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:schu04131]
    122867200
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122867200
   04515 Cell adhesion molecules [BR:schu04515]
    122867200
   04090 CD molecules [BR:schu04090]
    122867200
Membrane trafficking [BR:schu04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    122867200
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122867200
Cell adhesion molecules [BR:schu04515]
 Integrins
  Integrin beta subunits
   122867200
CD molecules [BR:schu04090]
 Proteins
  122867200
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 EGF_integrin EGF_Teneurin EGF_TEN BNR_6
Other DBs
NCBI-GeneID: 122867200
NCBI-ProteinID: XP_044033604
LinkDB
Position
LG20:complement(11631854..11654611)
AA seq 795 aa
MGALPVQRILWICGLIFTGITGVCGLNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVA
SSSRCDLPSELVAAGCALSALASPTSKMHVIEDRPLSNKATGATQNVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVSRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKDQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGQC
HLNSDNMYSMSTTMDYPSLALITEKMSENNINLIFAVTNLVVPLYQNYSELIPGTTVGTL
SNDSGNVVQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPKQKNKTFIIKPVGFKDSLSITVTFECDCKCQTKAQPNSPKCNHGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDRCSRHTGSGGPQSAICSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SNLGLLCSGRGQCVCGTCECTQPGAYGVTCDKCPTCPDACTMKKECVECKHFKRGKLFDD
NTCSRICKDEIVLVDELVLHDTNAVNCTYKDENDCVERFQYYEDASGKSILFVVKEPDCP
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgggtgctctcccggtgcaaaggatattatggatatgtggtttgatctttactggaata
acaggagtttgcggtttaaacgtctgcacctccagaggggccagcacatgcaagcaatgt
ctggctgtgcaccccagctgtgcgtggtgcttccaggaggatttcggccagggggttgcc
agttcttcccgctgcgatctgccaagtgagctggtggcagcgggctgtgcactgtcagct
ctggcgtctccaaccagcaaaatgcatgtgatcgaggaccggcccctcagcaacaaggca
acaggggccacgcaaaacgtcacccagataaaaccccagaaactacacatcaccctcagg
ccagatgatgctaagcgctttacagtgaaggtgcgtcaggtagaggactaccccgtggat
ctctactacctcatggatctctcctactccatgaatgatgatctcttccgcctgaggaca
ttgggaaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggggcttttgtggacaagccgctctcaccttacatgtacatctcccccaaagaggctgta
aagaacccctgctacagcattaacaccacctgcctgccccagtttggctacaaacacgtt
ctgtctctgacggaggaggtgagccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagatgccccggaaggaggctttgatgccatcatccaggctgctgtgtgcaag
gatcagatcggttggcgccccggtgcatcccaccttctgatcttcacctcagatgctaag
actcacgtggctctggatggtcgtctggctggaatcgtgcaacccaacgatgggcagtgc
cacctcaactctgacaatatgtacagcatgtctaccaccatggattacccatctctagct
ctgatcacagagaagatgtcggagaacaacatcaatctcatctttgctgtcaccaacctt
gtggttcctctgtaccagaactacagtgagttgattcctggcaccacagtaggaacactg
tccaacgactcgggcaatgttgttcagctcattctgaaggcctacgctaaaatccgttcc
aaggtggagctggagcttcaaggtgtcccggaggagttgtccctgtccttcaatgccacc
tgtctgaatggagagctcatccctggcctcaaatcctgctctgggctcaagataggagac
acggtctctttcagtgtggaggccagagctcgcggttgtcccaaacagaagaacaaaacc
ttcatcattaaacctgtgggcttcaaggactccctctccatcactgtcacctttgagtgc
gactgcaagtgccagaccaaagcccagcccaatagccccaaatgtaaccacggcaacggc
acctacgagtgtggcatctgcctgtgccacccaggtcgcttagggccacactgcgagtgt
gcagagggtgactataaccccacagagcaggaccgctgcagtagacacactggctctgga
ggacctcagtctgccatctgcagcggccgtggagactgcgtgtgcggccagtgtgtgtgc
cacagcagtgactttggaaaagtctggggaaagctgtgtgagtgtgatgacttcaactgc
ctgcgctacaagggggaactgtgctcaggtcatggcgtctgtaactgtggcttctgccag
tgtgcacccgactggcagggtgagaactgtaactgctccagacgtactgacacctgtatg
tccaacctgggtctgctgtgcagtgggaggggccagtgtgtgtgtgggacctgtgagtgc
acccagcccggggcctacggagtcacatgtgataagtgtcccacctgccctgacgcctgc
accatgaagaaggagtgtgtggagtgtaagcacttcaagaggggaaagctgtttgatgac
aacacctgctctcgaatctgcaaggatgagattgtgcttgtggatgaattagtgctccat
gatacaaatgctgtgaactgcacttacaaagatgagaatgattgcgtggagcgtttccag
tactatgaggacgccagtggcaaatcgatcttgtttgttgtcaaagagccagactgcccc
aagggtcctgacattttggtggtgcttctgtcggtggcaggagccatcttgtttcttggc
ttggcagctctgcttatctggaaactgctggtcaccatccacgacagacgggagttcgcc
aaatttgaggaagaacgcgctcgtgcaaagtgggacacggggcacaatcctctctacaaa
ggagccacatctaccttcacaaacatcacatacagaggaaaagactga

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