Siniperca chuatsi (mandarin fish): 122867232
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Entry
122867232 CDS
T08948
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122867232 (trim16)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122867232 (trim16)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122867232 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CC_BshC
Gp13-like
COG6_N
Motif
Other DBs
NCBI-GeneID:
122867232
NCBI-ProteinID:
XP_044033696
LinkDB
All DBs
Position
LG20:complement(3282353..3290340)
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AA seq
656 aa
AA seq
DB search
MADTAEEAALVPKQQLCGVCSGALSGDKPAACGHSVCGSCLGDKSKGCPNCLQSPDKPEP
AHGPTQNGTEAEAPVIKSQDEQTHDSKTAEEIKIQEDLKESEDPKKPEEEEKKESKPQTD
KEVKNGAKDEIKEEEVKVAPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLEK
PKFHNHRLVEPLRDIERRTCESHKWPLELFCCADGCCVCQDCVTEDHRGHNTVPVVEASR
QIQRELCEKQTEMVKTVTAAENAINKLQLNTVSIEQSVTEVRAVIESQFEELQALVEKAK
REVTEILEVEQKQALRQAEGIRVHLEQRCTELKKTQAQMEKLSRNKNDVDFLQEYSRWKK
EATDISLPGVYIGLMDRLKSFSRVIVDSTQELCAMLVSSYIEKVKETCKNDKMGIKTTVH
EIVAAKQNMSIPDPVTHADFLKYATHLSFDADTAHKFLRLTEENRKVTNTTPWQHPYPDV
PERFESWRQVLATDSFYLGRHYFEADISGEGTHIGLTYKSIDRKGKESNSCITGNNFSWC
LQWNGRTFSTWHSGVETPLNVEKFTRIGVYLDYTRGFLAFYGVDHTMTLIHEYKAEFLEP
LYPAFWLPKKENIVALVAPDEPLRLKSPSPPTSPANGAVKRQHSNDQKSVFPGSFK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacagctgaagaagcagctcttgtccccaaacagcagctgtgtggcgtctgc
tcaggtgcgctgagcggagacaagccggcagcctgtggtcactctgtctgcggctcctgt
ctcggggacaaaagtaaaggctgtcctaactgtctacagagccccgacaagcctgaacct
gctcacggtcccacacagaacggaacggaggctgaagctcctgtgatcaagagccaagat
gagcagactcacgactccaagacggcagaggagatcaaaatccaagaggatctgaaggag
tctgaggaccccaagaagcccgaggaggaggagaagaaagagtcaaaaccacagacagat
aaggaggtgaaaaatggagcaaaagatgagataaaagaagaggaggttaaggtggcacct
ttgggccctgacgatgtggtgtgtgactcgtgtatcgagagcccctgcagggccctcaag
tcctgcctcacctgcctggtgtcctactgcgaggcccacctccggcctcacctggagaaa
ccaaagtttcacaaccaccggctggtcgagccgctcagggacatcgagaggcggacctgc
gagagccacaaatggcccctggagcttttctgctgcgctgacggctgctgcgtctgtcag
gactgtgtgacggaggaccacaggggccacaacaccgtacctgtggtggaggctagcagg
caaatacagagggaactctgtgagaagcagactgagatggtgaagacggtgacagcagca
gagaacgccatcaacaaacttcagctcaacacagtctctattgagcaatcggtgaccgag
gtacgagcggtgatcgagagccagttcgaggagctgcaggcgttggtggagaaggcgaag
cgggaggtgacggagatcctggaggtcgagcagaagcaggcgctgaggcaggccgagggg
atccgggttcacctggagcagaggtgcacggagctgaagaagacccaggctcagatggag
aagctctcgagaaacaaaaacgatgtggatttcttacaggagtattcacggtggaagaaa
gaagccactgatatttctctgcctggggtctacatcggcctgatggaccgtctgaaatcc
ttcagccgtgtgatcgttgactccacgcaggagctgtgtgccatgcttgtgtcttcatac
atagagaaagttaaagagacatgcaagaatgacaaaatgggaataaagacaacagttcat
gaaattgttgcagcaaaacagaacatgtctataccagatccagtgacacatgccgacttc
ctcaagtatgccacgcacctgagtttcgacgctgacacggctcataagttcctgcgcctg
acagaagaaaacaggaaggtgactaacaccacaccctggcagcatccgtatcctgatgta
cctgagcgctttgagagctggcgccaagtcctggcaacagacagcttctatctggggcga
cactactttgaggcagacatcagcggcgaggggacgcacatcggcctgacctacaagagc
atcgaccgcaagggcaaggagagcaacagctgcatcacaggaaacaacttctcctggtgt
cttcagtggaacggccgcaccttctccacctggcacagcggcgtggaaacccctcttaat
gtggagaagttcactcgtatcggggtttatttggactacacgcgaggcttccttgctttc
tacggtgtggatcacaccatgacgctcatccacgagtacaaggcagagttcctggagcct
ctttatccggctttctggttgcccaagaaggagaatatcgtggccttggtggcaccagat
gagccattacggctcaaaagcccctctcctcccacctcacctgcaaacggagctgtaaaa
cggcagcatagcaatgatcagaagtccgtttttccgggatcatttaagtga
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