Siniperca chuatsi (mandarin fish): 122867294
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Entry
122867294 CDS
T08948
Name
(RefSeq) melanopsin-A-like isoform X1
KO
K04255
r-opsin
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
schu04030
]
122867294
G protein-coupled receptors [BR:
schu04030
]
Rhodopsin family
Vision
Opsin
122867294
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
7tm_4
Git3
Motif
Other DBs
NCBI-GeneID:
122867294
NCBI-ProteinID:
XP_044033851
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All DBs
Position
LG20:8058325..8085680
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AA seq
524 aa
AA seq
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MDSRLLIGPGMPTPDPTARGPWNISSVSPHRLMELSPVATTGSMVPSHPFPTVDVPDHAH
YTIGVVILAVGITGMLGNFLVIYAFCRSRSLRTPSNIFIINLAVTDLLMCLTQTPIFFIT
SMHKRWIFGKKGCELYAFCGALFGICSMITLTVIAVDRYMVITRPLASLGMMSRRKALSI
VAAAWVYSMGWSLPPFFGWSAYVPEGLMTSCSWDYMTFTPSVRSYTMLLFTFVFFIPLFI
IIFSYCCIFRAIRHTTRAIAKIKCEGTKDSAKRFHKMKSEWKMAKIALIVILLYVISWAP
YSCVALTAFAGYADKLTPYMNSVPAVIAKASAIYNPIIYAITHPKYRSALSKYIPFLRVL
LCVTGRDRYSSSSFLSTHRSTLTSQSESKCASKPCNNSLSESESARFSDTEEDCSSRTLV
SHQLSTVVKQASQRSKTLTEPEDISMSDINLQPTSHLPATLKNVMEESGPRTKTTSSIIV
TSISSPSILHSPPGFHGNLKLTKIYSPVAKEPLDIARLETTAIP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggattctaggctgctgattgggcctgggatgcctacaccggacccgaccgcccgggga
ccctggaacatcagctctgtcagtccgcaccggctcatggagctgtctccagtcgctaca
actggttccatggttccaagccacccgtttccaacggtagacgtcccagaccacgctcac
tatacaatcggtgttgtcatcctggccgtgggcatcacaggcatgctgggaaacttcctg
gtcatatatgctttctgcaggagccggagcttgcggacaccatccaacattttcatcatt
aacctggcagtcacagacctcctcatgtgtcttactcagacacccatcttcttcatcacc
agcatgcacaagcgatggatctttggaaagaaaggttgtgagttatatgccttctgcgga
gctctgtttggtatctgcagtatgataacactaacggtgattgcggtggaccggtacatg
gtgatcaccaggcctctggcctccttggggatgatgtctcgcaggaaagccctgagcatc
gtggctgctgcctgggtctactccatgggctggagcttgccccccttctttggctggagt
gcctatgtcccagagggtctaatgacatcttgttcctgggactacatgacgtttacccct
tctgtgcgctcctacaccatgctgctctttaccttcgtcttcttcatccctctcttcatc
atcatcttcagctactgctgcatcttcagagccatccgacacacaacgcgagccatagca
aagatcaagtgtgagggaaccaaagactctgcaaagaggttccataagatgaagagtgaa
tggaagatggccaagatcgcactcatcgtcatcctgctatatgtcatctcctgggccccg
tactcctgtgtggccctcactgcattcgctgggtacgctgacaagttgactccatatatg
aactctgttcctgctgtgatcgccaaagcatctgctatctacaaccccatcatatatgcc
ataacacaccccaaatacaggtcagcactcagcaagtatattcccttcctcagggtattg
ctgtgtgttactggcagagaccgttacagcagcagcagtttcctgtccacccaccgatca
accctcaccagtcaatcagaaagcaaatgtgccagcaagccctgcaacaactccctgtcc
gagagcgaatcagcccgcttctcagacacagaggaggactgctcgtctcggacgcttgtc
agtcatcagttgtccacagttgtcaaacaggccagccagaggtcaaagactctgacagag
cctgaagacatctccatgtcggacatcaatctgcagccaaccagtcatctgcctgctact
ctgaagaatgtgatggaggagtcggggccaaggactaagacaacatcatccatcattgtc
acctccatatccagcccatctatactgcatagtcccccaggtttccatggcaacctcaaa
ttgaccaaaatttacagcccggttgccaaggagccccttgacatagccaggctggagaca
acagcaataccatga
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