Siniperca chuatsi (mandarin fish): 122867301
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Entry
122867301 CDS
T08948
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04140
Autophagy - animal
schu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122867301 (epas1a)
04137 Mitophagy - animal
122867301 (epas1a)
04148 Efferocytosis
122867301 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122867301 (epas1a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122867301 (epas1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
EGF2_RECK
Motif
Other DBs
NCBI-GeneID:
122867301
NCBI-ProteinID:
XP_044033865
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Position
LG20:complement(8158885..8164269)
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AA seq
376 aa
AA seq
DB search
MTANKEKRRAISREAARRRRRVESDIFGDLSRLLPLQPSVRTHLDKPSIIRLALSYIRMH
TVLKGNTRTKAEASHTVKYGQVMESGEERRDCDGGRDEEKETEDLEASEETDMYLRILEG
FMMVLSTEGDIIFLSDNVSKYMGLTQTELMGHNIFEFTHPCDHEEIKNNLRLTAGEVWYG
AKRDFVMRIKSALTHRGRSANLKSATWKVLHCQGSMKVCVVPSSVSCLLLTCQPLPLSHT
LLSTHTFTSQHSMDMRFTYCDQRVTLLLGYSPEELLGRSIYDLCHTLDTNCLTKNHLNLC
FKSQSVSGQYRMLVRGGGYVWVESHSAVIPNVRPKSRRCAHQPLSILCVTYVLSGVEKPF
LQLSLDQTVHRYLSCN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaacaaggagaagagaagggcgatcagccgtgaggcagccagaaggagacga
cgggtggagtctgacatatttggagatttatctcgtctcctgccgctccaaccctctgtc
cgaactcacctggacaagccctccatcattcgcctcgctctcagctacatacgcatgcac
acagtgctcaaagggaacactaggacaaaagcagaggccagtcacacagtaaaatatgga
caagtgatggaaagtggagaggaaaggcgagactgtgacggaggacgtgacgaggagaaa
gaaacggaggatctcgaagcctcggaggagacagacatgtacctgaggatcctggaggga
tttatgatggtcctgtccactgagggagacataatcttcctgtctgacaacgtcagcaag
tacatgggcttgacacaaactgagctgatgggacacaatattttcgagtttactcaccct
tgtgaccacgaagaaatcaaaaataacctacgtctaacagcaggggaagtttggtacggt
gcaaagagggactttgtcatgaggataaaaagcgctctgacacacagaggaagaagcgcc
aacctcaagtcagctacatggaaggtcctccactgtcagggcagcatgaaggtgtgtgtc
gtcccgtcttcagtttcctgcctgctgcttacctgccagcctctgcccctttcacacaca
ctcctcagcacacacaccttcaccagccagcacagcatggacatgaggttcacatattgt
gaccagagagtgactctgcttttaggttacagtcctgaggagctgctgggccgttccatc
tatgatctctgtcacacactggacacaaactgtttgaccaaaaatcatctgaacttgtgt
tttaagagtcagtcagtcagcggtcagtacaggatgctggtgagaggtggaggttacgtc
tgggtggagagtcacagtgccgtcatccccaacgtccgacccaagtccaggcgctgtgcc
caccagccacttagcatcctttgtgttacctatgtcctcagtggagtcgagaagccgttc
ctgcagctctccttggaccagactgtccacagatatttgagctgcaactga
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