Siniperca chuatsi (mandarin fish): 122867311
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Entry
122867311 CDS
T08948
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122867311 (nlrc3)
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122867311 (nlrc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
Ferritin_2
AAA_16
AAA_33
Motif
Other DBs
NCBI-GeneID:
122867311
NCBI-ProteinID:
XP_044033890
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Position
LG20:14909612..14929130
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AA seq
1134 aa
AA seq
DB search
MERKAHYDSILDRSKRIMWQDNCYVDLQSTSCSISSHAETEDLCWVQKHQDQLQRFSTTS
FLEGMLSHLRKVDLLSSAEETKIREAGKLQDQVNMLTTTVTGKDTQGSDALRGFIESSDS
QVAQLIINHDPMVKEHKEVLLRRYEQYRDRDSVSCPKLNISSRTLLLVDGLSDLQQKEHD
LMQVGVTRGRKRNHLRQLGQAKLLEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFIRQWSQ
GAICTDVSFVLPFTFCELNSLEKLSAERLVKMAFPHLTDPSLVLSSSCRTLLILDGLDEF
RCTLNFSDAAPCNDPKKEVSIDDLVTNIIRGNLLPDIAVWVTSRPGVAALIPGGLVDRVT
EIPGFSPKDIRLFLNHHYSERDFASKIWAHLESHRILMVMCYIPCICWIVADTLMYIMQS
GTPDSLPRTCTELYAHFCSMKAEVGEPRGREPVKMEQLHGSNRKLLGNLGRLAFYGLLKH
KYTFSEQDLRAYGIDLLLTQCSLGAGVLVREESAMNTTYRFTHLTLQEFLAATFYHVSSK
RAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLTGLLSSVAQKPLAGL
LALGKDDGNQKAWAAGFLQGLLVSGGAVVSLRAVNLAYCLQELQHTELLRSVEEDLQLGS
LAGKLTRAHCVVLGYLLHVSPECGEQTNLTGSLNYTTVKCLLPQLLYCSHLRLENNHFKD
DVMELLGSLLSAKDCHIQEISLAENAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNAIEEEGAQALAEVLQCNRKLVSLNIQKNTIGAGGAKRIA
DALKTNRTLTKLILCSNQLGDKGTIALAEALTVNHTLLSLELQSNSISNRGMTALTKALK
LNHGLVSLNLRENSIGVEGAKNMAHALRENSSLQELDLTANLLHDEGVQAIAGAIKLNQG
ITSLHLQWNFIKSSATKALAHALCTNATMQLLDLQENAIGNEGVIFLAEALKTNTSLCTL
CLQGVSAGTRGAIAMAEALMTNQTLQTLDLRGNTVGMEGSKALANALKSNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRANAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaggcgcactacgattctatcctggaccgaagcaaacgcattatgtggcag
gacaactgctatgtggatcttcagtccacgtcctgctccatctcttcacacgcagaaaca
gaggatctttgctgggtccaaaagcatcaagaccagctgcaacgcttcagtacgacctcc
ttcctggaggggatgttaagccacctgagaaaggtggatttgcttagttcagctgaggag
accaagatcagggaagcgggcaagctccaggaccaggttaacatgctcacaactactgtc
actggcaaggacactcaagggtctgacgccctccggggcttcatagagagctcagattct
caggtagcccagctcatcataaaccacgatcccatggtgaaggagcataaagaggtgctg
ttacggcgatatgaacaatacagagacagagattcagtcagctgccccaaactgaacatc
tcctcaagaactttacttttggttgatggactttccgacctccagcaaaaggaacatgac
ttaatgcaggtgggggtgactcgaggaaggaaaagaaatcatctcagacagctggggcag
gccaaactgttggagcccctgacccgggtcagtttacctcccagggtctccctcacagtc
ggggtggctggtattggcaagacaacctgggtccgacacttcatcagacagtggagccaa
ggggccatctgcacagatgtgagcttcgtcttgcctttcactttttgcgagctgaactca
ttagagaaactttctgctgagaggctggtgaaaatggcttttcctcatttaacagacccc
agtctggtcttgagtagctcctgccgcacactgctcatacttgatggtttggacgaattc
cgctgcactttaaatttctctgatgcagctccttgcaacgacccaaagaaagaagtgtcc
attgatgatcttgttactaacatcatccgggggaatctgctccctgacatagcagtatgg
gtgacttccaggccaggagtggccgcactcatccctggaggattggttgacagggtgact
gagatcccaggattcagcccgaaggacatccggctcttcctaaaccaccactactctgag
agggattttgccagtaaaatatgggcgcacttggagtcccataggattttaatggtgatg
tgctacataccatgcatttgctggatagtagctgatactctgatgtacatcatgcagagt
ggtacaccagatagccttccaaggacttgtactgagctgtatgctcacttttgttccatg
aaggcagaagtaggtgaaccaagaggcagggagcctgtaaaaatggagcagctccatggg
agcaatcgtaaactgctgggaaatcttggacgactggcattttatgggctcctcaaacac
aagtacaccttcagtgagcaggacctcagggcctatgggatagatctactgttaactcag
tgcagtcttggtgctggagttcttgttcgggaggagtcagccatgaacacaacataccgg
ttcactcatttgactctgcaggagtttcttgcagctactttctaccatgtctcctccaag
cgggccatctttgacttgttctcagagagcaccatgtcttggcccaagatcggtttccag
aaccactttagaagtgcctttcagcactcacaacaggctgaagatggtcacttggatgtc
tttgtgcgcttcttgacaggtctgctgtcctcagtggcacagaaacctctcgctgggctt
ctggccctcgggaaagatgatggcaatcagaaggcatgggcagcagggtttttacaaggc
ctcttggtcagcgggggagctgttgtgtccctacgtgcagtcaacctggcttattgttta
caggagctgcaacacacagagctgttgcggagtgtagaggaagatttacagcttggtagc
ctagcagggaagttaacacgggctcactgtgttgtgctgggctacctgctgcatgtgtct
ccagagtgcggtgaacaaaccaacttaacaggctcgctgaactacacaacagtgaaatgt
ttgctcccacagctgctgtactgcagccatctcaggttagagaacaatcacttcaaagac
gatgtcatggaattgctgggaagcctcctgagcgccaaagactgccatatccaggagata
agtttggcagagaatgccatcagcaacaaaggtgccaaagccctgagtcgagccctcttg
gtaaaccggacactaacttctctaaatctacggaacaacaacatcggctctaaaggtgca
aagttcctggcagaggctctgaaaatgaaccaagtcctggtatcaatcaacttccagaac
aatgccattgaggaggaaggtgctcaggcccttgcagaagtactgcagtgcaaccgcaaa
ctggtgtctctgaatatacagaagaatacgattggagcaggaggggccaaaaggattgca
gatgcactgaagacaaaccggactctcacaaagctgattctttgtagcaaccagcttggg
gacaaaggaacaattgctctggcagaggctttgactgtcaaccacactctgctctcactt
gaacttcagagtaactcaattagcaacagggggatgacagccttaaccaaagcacttaag
ctgaaccatggccttgtctccttgaatttaagggagaactcaatcggggtggagggagca
aagaacatggcccacgccctccgtgagaacagctctctacaggaactcgatctcacagcc
aacctgttgcatgatgaaggggttcaggctatagctggagcaatcaagcttaatcaaggc
atcacctctttgcatctgcagtggaatttcatcaagtcctctgccactaaagctctggcc
catgcactctgcaccaatgccacaatgcagctcttggatctacaggagaatgctattggg
aatgaaggcgtcatttttcttgctgaagccctgaaaaccaacacgtctctgtgtacatta
tgtctccagggggtctcagcaggcacaaggggtgccattgcaatggcagaggctctaatg
accaaccaaaccttgcaaacattagatctacgtgggaacactgtagggatggagggatcg
aaggctctggctaacgcattgaaaagcaacagaagcctcaagtctttgaatcttcaggag
aactctctcggtatggatggagccatattcattgcaacggccttgaagggaaaccaccaa
ctgacatacatcaatttgcagggaaatggcattggagaatctggggcaaaggtcatatct
gatgctataagagccaacgctccgggctgtgtggtggacatctga
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