Siniperca chuatsi (mandarin fish): 122867340
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Entry
122867340 CDS
T08948
Name
(RefSeq) poly(ADP-ribose) glycohydrolase isoform X1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122867340
Enzymes [BR:
schu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
122867340
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Gene cluster
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
122867340
NCBI-ProteinID:
XP_044033950
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All DBs
Position
LG20:9379528..9401710
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AA seq
831 aa
AA seq
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MILSCMAAYHILRFARLLKKGLPDKQVWTKPNNTSFVVSAQVVLMTALTDFEPLAKRLRV
EINAPTSPSSSLKVPSIRIQSRDNETVDQQRRQNNTQTKMDIQPKTRADGLRGVKTKNDH
KKISPRQQTKFRDTLDRWLVKPSKNPSTAEVCQTQEDAEMADDGGFQSTSAQFLDCQNDE
KPTFSDPDDETQPLTPQDLDEDNPVSPASKDFAGSGLMQTLPHSYGGLEKQEMETCSASS
EGSVKHNNKITDFFSRTSSPGLPVRQGRADKSLQKQDADEETTSAVVKPDAKWLGTPINE
LKRMPECGGTLPPLKEVPGQHTVMIRTDLLQNGIVPVPYPAKFKDTWDDIHVKMPCSSSN
LFPVEDEETREWQNKSRWELIKETLNKKFTNPDKLKASFTSVLNAILKYSASQAKKWDFT
ALRLYCTKVLEPDVAEHLFDSLLPDMVQLALRASELCTKPIPLLKGGMNHSITMSQEQVA
CLLANAFFCTFPRRNSRKTEYCNYPDINFFRLFEGSSTKKIEKLKTLMCYFKSFTEQKPT
GLVTFTRKSLNKPLNWKSSQTPLTKLHITCEGTIEDDGYGMLQVDFANRFVGGGVTSSGL
VQEEIRFLINPELIVSRLFTEALDHNECLIITGTQQYSKYTGYAQTYQWDGSHQDTTPRD
GWQRRCTEIVAIDALQFKNFLEQFSPERINRELNKAYCGFARPEDQSQNLAAVATGNWGC
GVFGGDTRLKALLQMLAAAEAGRDVAYFTFGDSQLMTDVHNMHSFLTQRKITVGDVYDLL
GQYYSSVCKSCLGRRPEVSLYSFIYQQVSSSLAPADSDRGSARQRVPADCH
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatattgtcatgtatggctgcataccatattttaagatttgctcgcctattaaagaaa
ggactgcccgataaacaagtctggacaaaaccaaataacacctcattcgtggtgtcagct
caagttgtattaatgactgcgctgaccgactttgaacctttagcaaagagactcagggtt
gaaatcaatgccccgacatccccttcatcttctctcaaagtcccatctatacgtattcag
agcagagacaatgagacagtagatcaacaaaggaggcaaaacaacacccagacaaagatg
gatatacagccaaagactagagcagatggtttgcgaggtgtaaagacgaaaaatgaccat
aaaaaaatcagccccagacagcaaacgaagttcagagatactcttgaccgatggttggtt
aagccctctaaaaacccaagtacagctgaagtgtgccaaacccaagaggatgcagaaatg
gcagatgacggtggctttcaaagcacctcagctcagtttctggactgccaaaatgatgaa
aaacctactttctctgacccggatgatgaaacccaacccttgacaccacaagacctggat
gaagacaatcctgtgtcaccagcttccaaggattttgcaggaagtgggcttatgcagacg
ctgcctcacagttatggtgggttagaaaaacaagaaatggagacatgctcagcaagctca
gagggctctgttaaacacaataacaaaattacagacttcttttcaaggacctcatcacca
ggtttgcctgtgagacagggcagggcagataagtctctacagaaacaagatgcagacgag
gaaactacctcggctgttgtcaagcctgatgccaaatggctggggacgccaatcaatgag
ctaaagagaatgcctgaatgtggcgggacgcttcctccgctgaaggaagttcccggccag
cacactgtgatgataaggacagaccttcttcagaatggtatagtccctgttccataccct
gctaagtttaaggatacttgggatgatatccatgtcaagatgccctgttccagtagtaac
ctgtttcctgtagaagatgaggaaacgcgagaatggcagaataagagtcgttgggagttg
atcaaagaaactttaaacaagaaatttacaaatccagataagctgaaggcaagtttcaca
tctgtgttgaatgcaatattgaaatacagtgcctcacaagccaagaaatgggacttcaca
gcattacgtttgtactgcactaaggtcctggagcctgatgtggctgaacatctgtttgac
tccctgctgccagacatggtacaattagcactgagagcatctgagctctgtaccaagccg
atacccctcctcaagggaggcatgaaccactccatcaccatgtctcaggagcaggtggca
tgtctgctcgccaacgccttcttctgcaccttcccccgacgcaactccagaaagacagag
tactgcaactacccagatatcaacttcttcaggctgtttgaggggtcctctacaaagaag
attgagaagctgaaaactctgatgtgctatttcaaaagtttcactgagcaaaagcctaca
ggacttgtgacattcacacgaaaaagcttgaacaaacctctgaattggaaaagctcacag
acaccgctcacaaagctccacattacttgtgaagggaccattgaggatgatggttatgga
atgcttcaggtggattttgccaatcggtttgtgggaggaggagtcaccagttctggtctt
gttcaagaggaaatccgttttctgatcaaccccgagcttattgtttctcgcctcttcact
gaagccctggatcataatgaatgtctgatcatcacaggtacacagcagtacagtaaatac
acaggctatgctcagacctaccaatgggatggcagccaccaggacacaactccaagagat
ggctggcagagaagatgcacagagattgtggccattgacgcactgcagttcaagaacttt
cttgaacagtttagcccagagaggatcaaccgagaactcaataaggcctactgtggcttt
gctcgccctgaggatcaaagccaaaaccttgcggcagttgctacagggaactggggatgt
ggtgtttttgggggtgacacacgtctgaaagctctgctccagatgctggcagctgctgag
gcaggccgagatgtggcctatttcacctttggtgacagccagctcatgacagatgtccac
aacatgcactctttcctcactcagaggaagatcactgtcggggatgtgtatgatctcctg
gggcagtactacagctcagtgtgcaagagttgcctcggtcggcgccctgaagtcagcctc
tactccttcatctaccaacaggtcagctcctccctggcgccagctgactccgacaggggc
tcggccagacaacgtgtccctgcagactgccattaa
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