Siniperca chuatsi (mandarin fish): 122867386
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Entry
122867386 CDS
T08948
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122867386 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122867386 (nelfcd)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
122867386 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
122867386
NCBI-ProteinID:
XP_044034049
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All DBs
Position
LG2:20319767..20326580
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AA seq
578 aa
AA seq
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MDEEYYSGGGDWEGTDGNLEDYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKTYFQA
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagtattacagcggcggtggagactgggaaggcacggacggtaacttggag
gattatgttgaaggggaaaatgatgggaaaatccaggaagattgtctgcagaaattctcc
agcagggattacatcatggagcctgccatcttcaacaccctgaaaacgtatttccaagca
ggtggctctccagaacatgtcatccagcttctctctgaaaactactctgctgtggcacag
accgttaatctgctggcagagtggctcatccagatgggtgtagagcctgctcaggtccaa
gagcgagtagaaaatcacctcaagagtctcctgataaaacactttgaccctcagaaagca
gattccattttcactgttgagggagagactcctgcttggctcgagcagatgatagcacac
accacgtggagagatcttttctataagctggcagaggctcacccagactgcctgatgctc
aacttcactgtaaagctcatttcagacgcaggttatcagggcgagatcaccagtgtgtct
acagcgtgtcagcagctggaggttttctcccgggtgttgaggacgtctttggccacgctg
ctggatggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtgtgt
cacggcgagcacacctacctctttgcccaggcgatgatgtccatcctcgctcaggaggaa
cagggcggttcagctgttcgtaggatcggccaggaggtgcagaagtcagcgcatgagaga
ggtcatgatgccagtcagataacactcgcgctcggtacagcagcagcctaccctcgagcc
tgccaggcgctgggtgccatgttgtccaaaggagccctgaatcctgcagatatcacagtt
ctgttcaagatgttcagcagtatggacccgcctcctgtggagctgatcagagtgcctgcc
tttctggacctgttcatgcagtcgctgtttaaacctggatcaaagatcaaccaagaccat
aaacacaaatacatccacatcttggcctacgctgccagtgtggttgaaacatggaaaaag
aacaagcgagtcaacatcaataaagatgagcttaagtcgacttccaaggccatagagact
gtgcacaacctgtgttgcaatgagaacaaaggagctacagagctggtggctgaactcggc
actttgtaccagtgcatccggtttccagtagttgctatgggggttttgaaatgggtggac
tggacggtgtctgagccacggtacttccagctgcagacagaccacactccagtacattta
gctttactggacgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccagctg
ctcatcaagctttttgagacggagcactctcagctggacgtcatggagcagctggagttg
aagaagactctgctggaccgaatggttcatctgctgagccgtggctacgtcctgcctgta
gttggttacattcgcaagtgtctggagaaactcaacacggatatctccctcattagatat
tttgtcactgaggtgctggatgtgatcgcacccccctacacatcagactttgttcagctc
ttcctgcccatcctggagaacgacagcatcgcaggaaccatccgcacagagggagaacac
gatccagttgcagagttcattgctcattgcaagtcaaacttcatcatgataaactga
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