Siniperca chuatsi (mandarin fish): 122867388
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Entry
122867388 CDS
T08948
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122867388
03015 mRNA surveillance pathway
122867388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122867388
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122867388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_7
RRM_3
RRM_occluded
RRM_MUD2_C
RRM_5
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
122867388
NCBI-ProteinID:
XP_044034048
LinkDB
All DBs
Position
LG20:18872929..18878983
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AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDDKSKQRGKEKSGASKEGADKGRGRDKNRTRRNASSGSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEF
ETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccccaacaaagaggaaggaggatgacaagagtaaacagcgaggtaaggag
aagtcaggagcctcgaaagaaggagctgacaaaggccggggcagagacaagaaccgcacg
cgacgcaatgcttccagtgggagcagcaggtccagctccagctccagcagcagctcaggc
tccagctcaggctcctccagtggctccagctcctctgcctccagccactcgggctcatcg
agctcccgctcctcatcgtcctcctcctcatcctcctcgccgagccccagccgccagcgc
cacaacaacagacgacgctcacgctcaaagtcaaaatcagcaaagaaggatgacagggac
agacgacgtaggagccccacacccaaacccaccaaggtctacctgggccggctgactaga
aatgtcatcaaggaacacattcaggagatcttctccacctatggtaagatcaagatgatt
gacatgcccatgaaccgcgtccaccctcacctgtccaaaggctacgcctacgtggagttt
gagacacccgaggaggcagagaaggccctgaaacacatggacggaggtcagatcgacggt
caggagatcacagtcacagctgtgctgactcccacagtgcgccctcccccccgcaggctg
tcccctccccgcaggatgcctcctccaccaccaatgtggcgacgtactccacctcgaatg
aggagaaggtctcggtctccacggcgacgctctccagtacgtcgcaggtctcgatcgccc
ggccgccgccgtcaccggtcgcgctctagttccaactcctcccgctag
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