Siniperca chuatsi (mandarin fish): 122867408
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Entry
122867408 CDS
T08948
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122867408 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122867408 (heatr1)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122867408 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
Arm
Cnd1
Vac14_Fab1_bd
TOR1L1_N
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
122867408
NCBI-ProteinID:
XP_044034092
LinkDB
All DBs
Position
LG20:1160194..1191026
Genome browser
AA seq
2120 aa
AA seq
DB search
MTSLAHQLKRLALPQSDASLLTRREVASLLFDPRDAASMDRSSFYALGCTGFEELLGIEP
AFLEFQDTLFSPASLTLERSVQSREVNKKLDAGVSLFLARLSPYFLLKPAHKCIEWLVHR
FHVQLYNADSLLACALPYHDTNLFVRVLQLLKISDAGSRWNWLRRLQKPGVPLSRGALVT
HCYADLSFMDFICTLVTEAIQAYSGHSGSCSQLRVIFSFYASTIVSALDAADKVSDTIIS
KLLPYVQRGLKSPLTDYKAATYMIVCQLAVKVVMEASLVDTLAVHISKSLLKEPVLAQEG
LGCLVVLLQNQKEGAAGPRAFSRLSSMPTLVPTLQVMAAAHDVSPLLRYLLPHLVHAVFT
CGSGETETAELGVLESVLQSVPLTKGLDQTVARLLLDEYLSQTEVSAENTSALDHRLQPL
VRLFESRYCGALDGVLAGHVTTVSSSEQKHLFHQFLSLSMSSGKYQIIGDSNTSLLLSLK
HPQPSVRVSALEHLMGVVTSGQQSLDEAFLKDAVVDRLKDDVPEVAAAALRVLEVLFDAL
DPEDTVSCLLSLLHRVDLSVAEHWLPVLTEAVRLLSDPRLGKGGAELLQRAGWRLLPFLV
ITSTQLGLASCVARSSIITQHPLTLNWAQELDELTKRSSEPDFVGLANRRLVSTLTENLA
NMEHFSKRDALEKLVLSVEQQRGAGLRGRASFLVLTQTLLLGLGELSETQHLLTAQRVYM
MLEPLLLEVTGDADAQEEERRVIVSLLRDFISSLRCHDASFKGDVWWNPEKLDTNTCCYL
GLTCRLFGVIVSGAGEGPAAGSFRDLMKLLIQVHLPEPPTLFRFLCVLWGYGSNHGDQLD
VKVGAVLQTRALYMGAALLSAQPAATLEELAAADSPVVPSLLCCLSSPVREVRRAALSAL
QSLSGAVASPFQPITEKLLKTSEELIADPSYLSQALGVLHEDCLSVKVKAQQKKLQSAMR
QLLQSVRTSCCPSYSAAGLLRALSHVNGRSVLSALLPVLDRLLEQSGPDAPTVLRAEAQL
MQLVLGKYNEASAPLLAEDQNCLDLFIRALRTSTQQHPDIPSCQIVALEQITKPFFSALG
DESVQQKLLSVMFDLLVESRSPLVASTISSVFKGIAVDGQLVANELAPPEKPKVGVTVQQ
TRRSKMTQRKPQESGEAGPEGGAVSWQRVTLILELLQHKKKLKRAQMLVPVLFSLLARSL
EPGSGDQTNMEYTKQLLLSCLLNVCHKLSPGGGAAGPDVLDEDKFSVELVVQCIRASDMP
QTHHHALLLLGAAAAIFPEKVLHNIMPIFTFMGANIMRLDDAYSFRVIDKTVQMVIPALI
KAHQLSDGSSSAHVVAVVTRILHVFADALPHVPDHRRLPVLAQLVTTLGPARFLWVLLLL
LFELHTTQTAGSASEKDAALEKDVDFWISLCCQFEVTDQLASLVHILNFLLQLPDDRDDA
AVKRSVGRREAKKKKEEEEEEEKVEELIFSLEAHSSKELRHFKFLSVSFVAQLLGSASFI
GKVADGGDGEDESLRRLQQTLLEEILRYVHSVARCVEENADKPTAKFWRVLLNKAYDVLD
KVNSLLPTDTFITVMRGLMGNQLPSVRRKAMELLNNKLQHRTQWEEQQVTALLQLTGDLL
SIVGKGHGEVTEEKEAEQAINRQTALYSLKLLCRSFASDHQEAFVPVLLRMVELVTSPEE
EKNVTGSALLCIAEVVSTLKALAIPQLPRLMPAVLHTLTDRKELLTNEIYLLSAVTALQR
VTETLPHFISPYLQDTTSQVCRLTRLVETSSSSSSSSAQLSLRLASLRSTLATKLPPRVL
LPSLTKCYSNMVVKTKGQLGALMSILKEHISHMEKDQLNVHQSELTSFFLTALDFRAEHC
QGDLETTAEIEGRAIDCLLAMVMKLSEVTFRPLFFKLFDWSKSDRKERLLTFYRLSDCIA
ERLKGLFVLFAGNLVKPFADLLRQTNSSQTGEPLFDSCRAEEKRSLLLQHVLDCLYKIFL
YDTQRFLSKERADALMSPLVDQLENTLGGDQVYQQRVTQHLVPCVGQFSVALADDTQWKT
LNYQILLKTRHSDSKVRFSSLLMLMELASKLKENYVVLLPETIPFLAELMEDECEEVEQQ
VQKVVQEMENILGEPLQSYF
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttggcccaccagctgaagaggctcgcgctgcctcagagcgacgccagcctg
ctgacccgcagggaggtcgcctcgctgctcttcgaccccagagatgcggcctccatggac
agaagcagcttctacgccctcggctgcacagggtttgaggagctgctcggaatcgaacca
gccttcctggagttccaggacaccctgttcagcccggcctcgctgaccctggagcggagc
gtccagtccagagaggtgaacaagaagctggacgccggcgtctcgctcttcctcgcccgc
ctcagcccgtacttcctcctcaaaccggctcacaagtgcatcgagtggctggttcaccgc
ttccacgtccagctgtacaacgccgacagcctgttggcctgcgcgctgccgtatcacgac
accaacctgttcgtcagagtcctgcagctcctcaagatcagcgacgccggcagccgctgg
aactggctgcgccgcctgcagaaaccgggcgtgccgctgtccagaggagccctggtcacg
cactgctacgcagacctgagcttcatggacttcatctgcaccctggtcaccgaggccatc
caggcttattcggggcactcgggaagttgctcccagctcagagtgatcttctccttctac
gcctccaccatcgtctctgctctggacgctgcggacaaagtgtccgacaccatcatttcc
aaactgctgccatacgttcagaggggtctgaagtcgccgctgacagactacaaagctgcc
acctacatgatcgtgtgccagctggcggtgaaggtggtgatggaggcgagtctggtcgac
accctcgccgtgcacatcagcaagtctctgctcaaagagcccgtgttggcccaggagggt
ctgggctgcctcgtcgtgctgctgcagaaccagaaggagggcgccgctgggcccagagct
ttcagccgcctgagctcgatgccgacgctggttccgacgctgcaggtcatggcggcggct
catgatgtcagtcctctgctgcgctacctgctgcctcacctggtccacgccgtgttcacc
tgcggctccggtgagacggagacggccgagctcggcgtgttggagtccgtcctgcagtct
gttcctctgaccaaaggcctggaccaaaccgtggctcgtttgctgttggacgagtatctg
agtcagaccgaagtctctgctgaaaacacgtcggccctggatcaccgcctgcagcctctg
gttcgactgttcgagtccagatactgtggcgctctggacggcgtcctcgcaggtcacgtg
accaccgtcagcagctcggagcagaaacatctcttccaccagttcctctctctgtccatg
agcagcgggaaataccagattatcggcgactcgaacacgtcgctgctcctcagcctcaaa
cacccgcagccttcggtcagagtctcggctctggagcacctgatgggcgtcgtcacctcc
ggacagcagagtttggacgaagcgttcctgaaagacgccgtcgtggaccgcctgaaggac
gacgtgccggaggtcgcagctgccgctctcagagtcctggaggtgttgttcgatgcgttg
gaccccgaggacaccgtgtcgtgtttactgtcgctgctgcacagagtggatctgtcggtg
gctgagcactggctgccagtactgacggaggcggtgcgtttactgtccgacccccggctg
ggaaaggggggcgccgagctgttgcagagggcgggctggaggctgctgcccttcctggtg
atcacctccacccagctcggcctcgcctcctgcgtcgcccgatcctccatcatcacccaa
cacccgctcaccctgaactgggctcaagagctggatgagctgacgaagcggagctctgaa
cccgacttcgtgggtttggccaaccggcggctcgtctccacgttgaccgagaatctggcg
aacatggagcacttctccaaacgggacgctctggagaagctggtcctgtcggtggagcag
cagcggggcgccggcctccgggggagggcgtccttcctggtgctgacccagactctgctg
ctcggcctgggagagctgagcgagacccagcacctgctcaccgctcagagggtctacatg
atgctggagcccctcctgctggaggtcaccggggacgccgacgcccaggaagaagagcgt
cgtgtcatcgtgtctctgctcagagacttcatctcctccctcaggtgtcacgacgcctcc
ttcaaaggtgacgtgtggtggaacccggagaagctggacacaaacacctgctgttacctg
ggcctcacctgccgcctcttcggtgtcatcgtcagcggcgccggggaggggccggcggcc
ggcagcttcagggacttaatgaaactgctcatccaggttcacctgcccgagccgccgacg
ctcttcaggttcctgtgcgtgctgtggggatacggcagtaaccacggagaccagctggac
gtgaaggtcggcgccgtcctgcagactcgggctctgtacatgggcgccgctctgctgagc
gcccaaccggccgccacgctggaggagctggcggccgccgactcgcctgtggtcccgtcc
ttgctgtgctgtctcagctctccggttcgggaggtccggagggcggccctcagtgctctg
cagagcctatcaggagctgtcgcttctcccttccagccaatcacggagaagcttctgaag
acctcggaggagctcatcgccgacccttcatacctgagccaggctctgggcgtgcttcac
gaggactgtctgtctgtgaaagtgaaggcgcagcagaagaagctgcagtcggcgatgcgg
cagctgctgcagagcgtgcggacttcctgctgcccgtcgtacagcgccgccggcctgctg
cgagcgctgagccacgtcaacggacggtccgtcctgtccgccctgcttcctgttctggat
cggctcctggagcagagcggccccgacgcccccaccgtgctgcgggcggaggcccagctg
atgcagctcgtcctggggaagtacaacgaggcgtcggcccccctgctggccgaagaccag
aactgtctggatctgtttatcagagctctgaggacctcaacccagcaacaccccgacatc
cccagctgccagatcgtcgctctggagcagatcacgaagccgttcttctcggccctcgga
gacgagtcggtgcagcagaagctgctgtcggtgatgttcgacctgctggtggagagcagg
agtccgctggtggccagcaccatcagcagcgtctttaaagggatcgccgttgacggtcag
ctggtggccaatgagctcgctccaccagaaaaacccaaagtcggtgtgacggtgcagcag
acccgcaggagcaaaatgacgcagaggaaacctcaggagagcggcgaagccggtccagag
gggggcgctgtgtcgtggcagagagtcactctgatcctggagctgctgcagcacaagaag
aagctgaagagagcccagatgttggtgccggtcctgttctctctgctcgccaggagtctg
gagccgggctcgggcgatcagaccaacatggagtacaccaaacagctgctgctcagctgt
ctgctcaacgtctgccacaagctgtctcctggtggaggcgccgcggggccggacgtcctg
gatgaagataagttcagcgtggagctggtggttcagtgcatccgagcgtccgacatgccg
cagactcaccaccacgctctgctgctgctgggcgccgcggccgccatcttccccgaaaaa
gtcctgcacaacatcatgcccatcttcaccttcatgggagccaacatcatgcgcctggac
gacgcctacagcttcagggtcatcgacaagacggttcagatggtcatacctgctctgatc
aaggcgcaccagctctccgacggcagctcttcggctcacgtggtcgccgtggtgacgagg
atcttgcacgtgttcgccgacgcgctgcctcacgtgcccgatcaccggcggctgcccgtc
ctggcccagctggtgaccacgctgggccccgcccgcttcctctgggtcctgctgctcctc
ctgttcgagctgcacaccacgcagaccgccggctccgccagcgagaaggatgcagctctg
gagaaagacgtggacttctggatttctctctgctgtcagttcgaggtgaccgaccagctc
gcgtccctcgtccacatcctgaacttcctcctgcagctgcccgacgacagagacgacgct
gcagtgaagcgctccgtcggccggcgagaagccaagaagaagaaggaggaggaggaggag
gaggagaaggtggaggagctgatcttcagtctggaggctcacagcagcaaagagctgcga
cacttcaagttcctgtccgtctccttcgtggctcagctgctcggctctgccagcttcatc
gggaaggttgcggacggcggtgacggcgaggatgagtctctccggcggctgcagcagacg
ctgctggaggagatcctgcgctacgtccacagcgtggctcgctgcgtggaggagaacgcc
gacaaacccaccgccaagttctggagagttctgctgaataaagcctacgatgttctggat
aaggtgaactccttgttgcccacggataccttcatcacggtgatgagagggctgatggga
aatcagctgccgtcagtccggaggaaagccatggagctgctgaacaacaaactgcagcac
cggacgcagtgggaggaacaacaggtcactgcgctcctacagctgaccggcgacctgctg
agcattgtgggtaaaggtcacggtgaggtcacggaggagaaggaggcggagcaggccatc
aaccggcagacggcgctctacagcctcaagctgctctgtcgcagctttgcctctgaccac
caggaggcgttcgtgcccgtcctgctgcgaatggtggaactggtcacttcgccggaggaa
gagaagaacgtgacgggcagcgctctgctctgcatcgccgaggtggtcagcacgctcaag
gccctcgccatcccacagttaccaaggttgatgccggcggtgctgcacacgctgacagac
aggaaggagctgctgaccaatgagatctacctgctgagcgccgtcaccgcgctccaacgt
gtcacggagacgctgccgcacttcatcagcccgtacctgcaggacaccacctcacaggtg
tgtcgcctgactcggctggtagagacctcctcctcctcgtcttcctcctccgcccagctg
tccttacgcctcgcctccctcaggagcaccctcgccaccaagctgccccccagggtccta
ctgcccagcctcaccaagtgctacagcaacatggtcgtcaaaacgaagggccagctgggg
gcgctgatgagcatcctgaaggagcacatcagtcacatggagaaagaccagctcaacgtc
caccaatcagagctcacctccttcttcctcaccgccctggacttccgtgccgaacactgc
cagggtgacctggagacgacggcggagatcgaaggccgtgcgatcgactgcctgctcgcc
atggtgatgaaactgtctgaggtcacgttcaggccgctcttcttcaagctgttcgactgg
agtaaatccgacaggaaagagcgcctgctgactttctaccggctgtccgactgcatcgcc
gagcggctcaaaggactcttcgtcctgttcgcaggaaacctggtgaaaccgttcgctgac
ctgctgcgacagaccaacagctcccagacaggcgagccgctgttcgactcgtgccgagct
gaagagaagcgcagtctgctgctgcagcacgtcctcgactgtctctacaagatcttcctg
tacgacacgcagagattcctcagtaaagagcgagccgacgcgctcatgagcccgctggtc
gaccagctggagaacacactgggcggagaccaggtgtaccagcagagggtgacccaacac
ctggttccctgcgtgggtcagttctctgtggcgctggctgacgacactcagtggaaaact
ctcaactaccagatcctcctcaagacccgacacagcgactccaaggtgcgtttctcctct
ctgctgatgttgatggagctggcgtccaaactaaaggagaactacgtggtgctgctgccg
gagaccatccccttcctggctgaactcatggaggatgagtgcgaggaggtggagcagcag
gtccagaaggtggtgcaggagatggagaacatcctgggagaaccgctgcagagctacttc
taa
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