Siniperca chuatsi (mandarin fish): 122867473
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Entry
122867473 CDS
T08948
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122867473
04121 Ubiquitin system [BR:
schu04121
]
122867473
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
122867473
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122867473
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
122867473
NCBI-ProteinID:
XP_044034237
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Position
LG20:complement(24372606..24375347)
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AA seq
409 aa
AA seq
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MLTTLEPRYEIPSRRHFTDKVIPALYADTRAKVEGALRSAKRVALTCDGWTSRATESFVT
ITAHFIDDNWDAQSYVLQTRAMNDSHTGAHMAEVLKTAVDEWKLTEKEPAVVTDNAANMS
VAVEIAGYPHVRCFAHVLNLAVQRALKLPNVARLLGRIRRICTFFHRSTSAAEALKRNQK
MLGLPHHKLITDVVVRWNSAYEMISRFLEQQPAVTAALLSPEVRKNTTDISTLTDGDIKN
AEEVVKALHPMLVATKSMCEEKSPTVSIIAPLHAQLLSNTLSTIEDAPLVKDIKCAIHGD
LSKRYMSAEEKNFLYVASALDPRFKSMLFLSPSEVQETYAMVVSKAAALMGNADVGMQSD
GNVEEGGSTEESGPADDTSDEDRPPHTPKKGDPHLQTSLDKHSSMPDLT
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaacactggaaccgagatacgagataccgagtcgtcggcactttacagacaaa
gtcatccctgcattgtatgcagataccagagccaaagtggagggtgcgctccggtctgct
aaacgagttgcactaacctgtgatggttggacgtcaagggccaccgagtccttcgtaact
attactgcccacttcatagacgacaactgggatgcccaaagctacgtccttcagactcgg
gctatgaatgacagtcatactggcgctcacatggcagaggtgcttaagacggctgtagac
gagtggaagctcaccgagaaagagccagcagtggtgactgacaacgcagcgaatatgtcc
gtagctgttgagattgctggatatccacacgttcgctgtttcgctcatgttttgaatctc
gcggtgcagcgtgccctcaaactgccaaatgtcgctcgactgctcgggagaattaggaga
atttgcacattcttccacaggagcacctcagcagctgaggcactgaagaggaaccagaag
atgttaggccttccgcaccacaagctgataactgatgttgttgtccgctggaacagtgcc
tatgagatgatcagccggtttcttgagcaacagccagctgttactgctgccctcttatct
ccagaggtcagaaagaataccactgacatctctaccctgactgatggagacatcaagaat
gcagaagaggttgtgaaagccctccatccaatgctggtagcaacaaagagcatgtgtgag
gagaaaagtccaactgtttccatcattgctcctcttcacgcccaacttctgagcaacaca
ctcagcacaattgaggatgcccctctcgtcaaggacataaagtgtgccatccatggagac
ctatcaaagcgctacatgtctgcagaggagaaaaacttcctctacgttgcctccgcctta
gaccccaggtttaagtcgatgctcttcttgtcgccttcagaagtgcaggagacgtatgcc
atggttgtgtccaaggctgctgccctgatggggaatgcagatgtgggaatgcagtctgat
ggtaatgtagaggagggaggaagcactgaagagagtggtcctgctgatgacaccagtgat
gaggaccgaccaccacacacaccaaaaaaaggagatccgcacttgcaaacctccttggac
aaacattccagcatgccagatcttacctga
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