Siniperca chuatsi (mandarin fish): 122867597
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Entry
122867597 CDS
T08948
Name
(RefSeq) thyroid hormone receptor alpha-B isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122867597
04081 Hormone signaling
122867597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122867597
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122867597
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122867597
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
122867597
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122867597
NCBI-ProteinID:
XP_044034510
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Position
LG20:4936981..5078406
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AA seq
436 aa
AA seq
DB search
MEHVPEEQDPNPSEGEEKRWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMA
MDLVLDDSKRVAKRRLIEENRERRKKEEMVKTLQNRPEPIGSEWELIRLVTEAHRHTNAQ
GAQWKQKRKFLPDKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
QSMGRRQTTGKWRDSQRERERERALQTLPCEDQIILLKGCCMEIMSLRAAMRYDPESETL
TLSGEMAVKREQLKNGGLGVVSDAIFDLGKNLAQFNLDDTEVALLQAVLLMSSDRSGLTC
MDKIEKCQETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPN
ELFPPLFLEVFEDQEV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgttcccgaggagcaagaccctaacccatcagagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagaggaagaacagccaatgttcggtgaagagtatgactggg
tacattcctagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaagccaca
ggttaccactaccgctgcattacctgcgagggctgcaagggtttcttccgtaggaccatt
caaaagaacctccaccccgcctactcctgtaagtacgatggctgctgcatcatcgacaag
attacccgcaaccagtgtcagctctgccgcttcaagaagtgtattgcagtgggcatggcc
atggacttggtgctggatgactcaaagcgggtggctaaacggcgcctgattgaggagaac
agggagcgacgcaaaaaggaggaaatggtgaaaactctccagaaccgtccagagcccatc
gggtccgagtgggagctgatccgcctggtgacagaggcccaccgacataccaatgctcag
ggcgctcagtggaaacagaagcgcaaattcctgccagacaaaatcggccagtctccggtt
gcgcccacgtcagacggagacaaggtggacctggaggccttcagcgagttcaccaagatc
atcactcctgccatcacccgtgttgttgactttgccaaaaaactgcccatgttctctgag
caatccatgggcagaaggcaaacaacagggaagtggagggacagtcaacgagagagagag
agagagagagcgctgcaaaccctaccttgtgaagaccagatcatcctgttgaagggctgc
tgcatggagatcatgtcgctgcgagctgccatgcgctacgacccagagagtgagacgcta
acgctgagcggggagatggctgtgaagcgtgagcaactgaagaacggcgggcttggcgtg
gtgtcggacgccatattcgatctgggcaagaacctggcacagttcaacttggacgacaca
gaggtggcgctgttgcaggccgtgcttctcatgagctcagatcgttctggactgacctgc
atggacaagattgagaagtgccaggagacctacctgctggcgtttgagcactacatcaac
taccgcaagcacaacattccccacttctggccgaagctcctgatgaaggtgacagacctg
cggatgatcggagcgtgccacgccagccgcttccttcatatgaaggtggagtgtcccaac
gaactcttccccccgctcttcctagaggtcttcgaggaccaggaggtgtga
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