Siniperca chuatsi (mandarin fish): 122867616
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Entry
122867616 CDS
T08948
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122867616 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122867616 (gspt1)
03012 Translation factors [BR:
schu03012
]
122867616 (gspt1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122867616 (gspt1)
Translation factors [BR:
schu03012
]
Eukaryotic type
Release factors
122867616 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122867616
NCBI-ProteinID:
XP_044034558
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Position
LG20:complement(17458492..17467113)
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGAPDPVGSMDVAETAAPVENGGTEADMTTEEETWEQKEEPGGGGGGGGQEDLGSG
GACEEGGAAGKEDEEMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
PECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDACPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcggggctcccgaccgccttcgccgctcttaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtctttgtaccgagcttccttcaagccagcgcggtggaa
atgccggcttcagacggtgcccctgatccagttggcagcatggatgtggcagaaacagcc
gctccagtggagaatggaggcacagaggcagacatgaccacagaggaagagacctgggag
cagaaggaggagccggggggaggtggaggaggcggaggacaggaggatctgggttcagga
ggggcctgtgaggagggcggagccgccgggaaagaggacgaggagatgatggaggaggaa
gaggaggagatgcccatgcccaaagtggctccggcacctccggatgcccccaagaaagaa
catgtgaacgtggtcttcatcggtcacgtggatgctggtaaatcaactattggaggacag
atcatgtacctaactggaatggtggagaagcgaaccctggaaaaatatgaaagagaagca
aaagaaaagaacagggagacatggtacctgtcgtgggctctggacacaaaccaggaggag
agagacaaggggaagacagtcgaggtcgggagagcttactttgagactgagaaaaaacat
ttcactatcctggatgcccctggacacaagagctttgtccccaacatgattggtggagcg
tcacaagccgacctggcagtcctggtgatttcagcgagaaagggggagtttgagaccggc
tttgagaagggtggacagacgcgggaacatgccatgctggctaaaacagcaggagtcaag
catctcattgtcctgatcaacaagatggatgaccccactgtcaactggagcctagaaagg
tatgaagagtgtaaggagaagctggtgccatttctaaagaaggtgggcttcaaccccaag
aaggacatccactttatgccttgctccggactcacaggtgccaacctcaaggaccccgta
cctgaatgcccctggtacacgggtttgccatttattgcccatctggacagtttgccaaac
ttcaccagatccagcgatggaccagtcagactacctatcgtagacaagtacaaggacatg
ggcacagttatccttgggaagctggaatctggatccatcagtaaagcccagcagctggtc
atgatgccaaacaggcacacggtggaggtgttgagcctgctgagtgacgatgtggagaca
gacgatgcatgtcccggggagaacctgaagttgaggctgaagggcatcgaggaggaggaa
atcctccctggttttatcctctgtagccctgacaacctctgccactccggacgcaccttt
gacgcacagatcgtcatcattgagcacaaatcaatcatttgccctggttacaatgcagtc
cttcacatccacacctgcattgaagaagtgcaaatcacagccttaatctgtctggtggac
aagaagacaggggagaaaagcaagacacgaccacgctttgttaagcaggaccaggtgtgt
atcgccaggctccgggcagcaggagtcatctgtttagagaccttcaaagacttccctcag
atgggacgattcacgctgcgagacgaaggcaagactatcgctatcggcaaagtgctgaag
ctggtgccagaaaaggactaa
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