Siniperca chuatsi (mandarin fish): 122867679
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Entry
122867679 CDS
T08948
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122867679 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122867679 (si:ch211-141o9.10)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122867679 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122867679 (si:ch211-141o9.10)
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Ntox15
Motif
Other DBs
NCBI-GeneID:
122867679
NCBI-ProteinID:
XP_044034723
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All DBs
Position
LG20:17534429..17538157
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AA seq
384 aa
AA seq
DB search
MGPRKRGARKRKTEEAFGGEKDGEDTEEKEAEERGDRRRKDRGNKKYIGAHVGIQGGIWK
AVESCTEMGGSSFALFLGSQRSWKRPALDQTAASKFREQCSLQELDPAHILPHGSYLMNC
GSPKEGLSDTDGCLLQILSLTLLPCSLTFSCLPLSCIGYLIFPTVSCLLTTSSGFCAMLH
PDVFEKSQALLVDELSRCSLLGLNLYNFHPGSSLGSITTEQCVDKIAGSINHAHQQTPAV
VTVLENMSGQGSTVGGKFSELKSIIDKVRDQTRVGVCLDTCHAFAAGYDLAAEGGVKAML
DEFDQEVGLHYLKAIHLNDSKGKLGCNLDRHEDIGKGHIGISAFRDIVNEPRLDNIPLIL
ETPGRPGFEYAEQIELLYSLCEKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgagaaagagaggagcaaggaaaaggaaaaccgaggaggcctttggaggagaa
aaggacggagaggacaccgaggagaaggaggctgaggagagaggagacaggaggaggaag
gaccgtgggaataagaaatacatcggagctcatgttggcatccaaggtgggatatggaaa
gcagtggagtcctgcacagagatgggtggcagcagcttcgccctgtttctgggctcccag
cggtcatggaagaggccagcactggaccagacggctgcatccaagtttcgggagcaatgt
tccctacaagagcttgacccagctcacatcttgcctcatgggtcctacctgatgaactgt
ggatctcctaaagagggtttgtcagacactgatggatgcctcctgcagattctgtccttg
actttactcccttgctctctcacattcagttgcctgcccttgtcttgcattggttattta
atctttccaactgtgtcttgtcttctgacaacctcctctggtttctgtgccatgttgcac
ccagatgtgtttgagaagagccaggcactgctagtggatgagctaagccgctgcagcctc
ctgggtctcaacctctacaacttccaccctggctcctccctgggctccatcaccactgag
cagtgtgtggacaagatagcaggatccattaaccacgctcaccagcaaacacctgctgtg
gtaacagtgctggagaacatgagcggtcagggcagtacggtgggcggtaagttctctgag
ctgaagagcatcatagacaaagtgagagaccaaaccagagtcggagtgtgtctggatacc
tgccacgccttcgcagcaggatacgacctggctgcagagggaggagtgaaggccatgctt
gatgagtttgatcaggaagtggggctccactatcttaaagccatccatctcaatgactcc
aaaggtaaactaggctgtaacctcgaccgccatgaagacatcggcaaaggtcacattgga
atctctgctttccgagacattgtcaatgagcccagattagacaacatccctttgatactg
gagacacctggacggccaggattcgagtatgctgagcagattgaacttctctattccctt
tgtgagaaaaaatag
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